>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)|
           (Signalosome subunit 5b) (Jun activation domain-binding
           homolog 1)
          Length = 357

 Score =  156 bits (394), Expect = 3e-38
 Identities = 76/107 (71%), Positives = 88/107 (82%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           SSSA+AR+TWELENNI            I+ YD+A+ A+  QEKPWA+DP++F+R  ISA
Sbjct: 4   SSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISA 63

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMVVHAR+GGTIEIMGLMQGK EGD+IIVMDAFALPVEGTETR
Sbjct: 64  LALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETR 110

>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)|
           (Signalosome subunit 5a) (Jun activation domain-binding
           homolog 2)
          Length = 358

 Score =  150 bits (378), Expect = 2e-36
 Identities = 72/107 (67%), Positives = 84/107 (78%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           SSS +AR+TWELEN+I            I+ YD+ +  R  QEKPW  DPH+F+R +ISA
Sbjct: 4   SSSTIARKTWELENSILTVDSPDSTSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISA 63

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMVVHAR+GGTIEIMGLMQGK +GD+IIVMDAFALPVEGTETR
Sbjct: 64  LALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETR 110

>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (Dch5) (JAB1 homolog)
          Length = 327

 Score =  119 bits (298), Expect = 4e-27
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = +2

Query: 155 SAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALA 334
           S  A++TWELENNI            I+RYD     +    KPW  DPH F+  +ISALA
Sbjct: 3   SDAAQKTWELENNIQTLPSCDE----IFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALA 58

Query: 335 LLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LLKMV+HAR+GGT+E+MGLM GK E +++IVMDAFALPVEGTETR
Sbjct: 59  LLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETR 103

>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1) (Kip1 C-terminus-interacting
           protein 2)
          Length = 333

 Score =  116 bits (291), Expect = 3e-26
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           S S +A++TWEL NN+            IY+YD+         KPW  D H+F+  +ISA
Sbjct: 3   SGSGMAQKTWELANNMQEAQSIDE----IYKYDKKQQQEILAAKPWTKDHHYFKYCKISA 58

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMV+HAR+GG +E+MGLM GK +G+++I+MD+FALPVEGTETR
Sbjct: 59  LALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETR 105

>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1)
          Length = 333

 Score =  116 bits (291), Expect = 3e-26
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           S S +A++TWEL NN+            IY+YD+         KPW  D H+F+  +ISA
Sbjct: 3   SGSGMAQKTWELANNMQEAQSIDE----IYKYDKKQQQEILAAKPWTKDHHYFKYCKISA 58

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMV+HAR+GG +E+MGLM GK +G+++I+MD+FALPVEGTETR
Sbjct: 59  LALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETR 105

>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 332

 Score =  116 bits (291), Expect = 3e-26
 Identities = 55/107 (51%), Positives = 76/107 (71%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           + S+VA++TWEL NN+            IY+YD+         KPW  D H+F+  ++SA
Sbjct: 2   AGSSVAQKTWELSNNMQEVQSIDE----IYKYDKKQQQEILAAKPWTKDHHYFKYCKVSA 57

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMV+HAR+GG +E+MGLM GK +G+++I+MD+FALPVEGTETR
Sbjct: 58  LALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETR 104

>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score =  116 bits (291), Expect = 3e-26
 Identities = 55/107 (51%), Positives = 76/107 (71%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           + S+VA++TWEL NN+            IY+YD+         KPW  D H+F+  ++SA
Sbjct: 4   AGSSVAQKTWELSNNMQEVQSIDE----IYKYDKKQQQEILAAKPWTKDHHYFKYCKVSA 59

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMV+HAR+GG +E+MGLM GK +G+++I+MD+FALPVEGTETR
Sbjct: 60  LALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETR 106

>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score =  113 bits (282), Expect = 3e-25
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = +2

Query: 149 SSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISA 328
           + S++A +TWEL N++            IY+YD+         KPW  D H+F+  ++SA
Sbjct: 2   AGSSIAMKTWELSNSMQEVQSIDE----IYKYDKKQQQEILAAKPWTKDHHYFKYCKLSA 57

Query: 329 LALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           LALLKMV+HAR+GG +E+MGLM GK +G+++I+MD+FALPVEGTETR
Sbjct: 58  LALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETR 104

>CSN5_ASPFU (Q4WZP2) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 334

 Score =  110 bits (276), Expect = 1e-24
 Identities = 53/102 (51%), Positives = 70/102 (68%)
 Frame = +2

Query: 164 ARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALALLK 343
           A+Q+WELEN I            +YRYDE  +      +PWA DPH+F+  RISA+AL+K
Sbjct: 4   AQQSWELENTISLIDPQRDA---LYRYDEETHKALSAARPWAKDPHYFKSIRISAVALIK 60

Query: 344 MVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           M +HAR+GG++E+MGLMQG    ++ +V DAF LPVEGTETR
Sbjct: 61  MTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETR 102

>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 340

 Score =  110 bits (274), Expect = 2e-24
 Identities = 53/104 (50%), Positives = 69/104 (66%)
 Frame = +2

Query: 158 AVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALAL 337
           A A + WEL+NN+            +Y +D  A    ++E+PW  DP HF+  RISA AL
Sbjct: 3   ASALKAWELDNNVQLVDPKRDA---LYNFDADAQKAINKEQPWKQDPSHFKHVRISATAL 59

Query: 338 LKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           +KM +HAR+GG +E+MGLMQG  +GD+ IV DAF LPVEGTETR
Sbjct: 60  IKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETR 103

>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (JAB1 homolog)
          Length = 368

 Score =  108 bits (271), Expect = 5e-24
 Identities = 50/106 (47%), Positives = 70/106 (66%)
 Frame = +2

Query: 152 SSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISAL 331
           SS+V ++ WE ENN+            I+ Y+          KPW  DPH+F++ +ISA+
Sbjct: 9   SSSVPQRNWEKENNVQNVDS-------IFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAI 61

Query: 332 ALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           ALLKM +HA+ GG +EIMGL+QG+ + +S I++D FALPVEGTETR
Sbjct: 62  ALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETR 107

>CSN5_EMENI (Q5BBF1) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 335

 Score =  107 bits (268), Expect = 1e-23
 Identities = 52/102 (50%), Positives = 69/102 (67%)
 Frame = +2

Query: 164 ARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALALLK 343
           A+ +WELEN +            +YRYDE  +      +PW  DPH+F+  RISA+ALLK
Sbjct: 4   AQLSWELENAVTLIDPQRDS---LYRYDEETHKYLSDTRPWTKDPHYFKSVRISAVALLK 60

Query: 344 MVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           MV+HAR+GG++E+MGLMQG    ++ +V DAF LPVEGTETR
Sbjct: 61  MVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETR 102

>CSN5_USTMA (Q4P804) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 406

 Score =  107 bits (268), Expect = 1e-23
 Identities = 58/115 (50%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
 Frame = +2

Query: 131 SAMEPTSSSAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFR 310
           +A   +SS+++AR  +EL N I            I+ YD  A       +PW TDPH F+
Sbjct: 2   TAPSSSSSASMARANFELNNAIIPLSSTTLDS--IFAYDNEAQRAILHAQPWKTDPHFFQ 59

Query: 311 RARISALALLKMVVHARAGGTIEIMGLMQGKF--EGDSIIVMDAFALPVEGTETR 469
           + RISA+AL+KMV+HAR+GG  EIMGLMQGK   E  ++ VMD+FALPVEGTETR
Sbjct: 60  KVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETR 114

>CSN5_CRYNE (Q5KAB0) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 371

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 47/105 (44%), Positives = 64/105 (60%)
 Frame = +2

Query: 155 SAVARQTWELENNIXXXXXXXXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALA 334
           ++ AR+T+E+ NN+            I++Y          E PW TDPH+F   +ISA+A
Sbjct: 2   ASTARKTFEINNNVQVVDPSAA----IFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVA 57

Query: 335 LLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           L+KMV HAR+GG  EIMG+M GK    +  +MD  ALPV+GTETR
Sbjct: 58  LIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETR 102

>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 336

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 39/79 (49%), Positives = 58/79 (73%)
 Frame = +2

Query: 233 IYRYDEAANARAHQEKPWATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEG 412
           +Y YD  A+      +PW  D  +F+  RIS++A++KMV+HAR+GG +E+MG+MQG  EG
Sbjct: 17  LYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSGGNLEVMGMMQGYIEG 76

Query: 413 DSIIVMDAFALPVEGTETR 469
            ++++ DA+ LPVEGTETR
Sbjct: 77  STMVITDAYRLPVEGTETR 95

>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 91.7 bits (226), Expect = 9e-19
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = +2

Query: 233 IYRYDEAANARAHQEKPWATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEG 412
           ++R+DE       +E PW  DP  FR  +ISA+ALLKM+ H   G  +E+MG +QGK EG
Sbjct: 8   VFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEG 67

Query: 413 DSIIVMDAFALPVEGTETR 469
            S+I++D+FALPVEGTETR
Sbjct: 68  ASLIILDSFALPVEGTETR 86

>CSN5_YARLI (Q6C703) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 354

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
 Frame = +2

Query: 173 TWELENNIXXXXXX---XXXXXXIYRYDEAANARAHQEKPWATDPHHFRRARISALALLK 343
           T+++EN+I               +Y+YD+          PW TDP +FR   +S++AL+K
Sbjct: 6   TFQVENDIVDVDSTPQQGFDRDDLYKYDDVEQKAILAAHPWRTDPSYFRNVLVSSIALVK 65

Query: 344 MVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTETR 469
           M +HAR+GG IE+MG+M GK   ++ +VMD + LPVEGTETR
Sbjct: 66  MAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETR 107

>CSN5_CANAL (Q59PG6) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 213

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = +2

Query: 266 AHQEKPWATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFAL 445
           A  +KPW  D ++F +  IS+LAL+KM  HA+ GG+IEIMG++ GK  G SIIVMD + L
Sbjct: 59  ARDKKPWKQDVNYFNKCYISSLALMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRL 118

Query: 446 PVEGTETR 469
           PVEGTETR
Sbjct: 119 PVEGTETR 126

>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 469

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 37/64 (57%), Positives = 50/64 (78%)
 Frame = +2

Query: 278 KPWATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEG 457
           +PW ++  +F++  IS+LAL KM VHA++GG IE+MG+M GK   +SIIVMD + LPVEG
Sbjct: 51  RPWKSNAKYFKKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNSIIVMDVYPLPVEG 110

Query: 458 TETR 469
           TETR
Sbjct: 111 TETR 114

>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 420

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 30/66 (45%), Positives = 50/66 (75%)
 Frame = +2

Query: 272 QEKPWATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPV 451
           Q++ W  DP +F++A +SALA +K++ HA  GG +E++G++ G  + + I+V+D++ LPV
Sbjct: 59  QQELWKQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPV 118

Query: 452 EGTETR 469
           EGTETR
Sbjct: 119 EGTETR 124

>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 373

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
 Frame = +2

Query: 281 PWATD----PHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALP 448
           P+ATD    P HF++  IS LA  KM+ HA  GG IE+MG++ G    D I+V D ++LP
Sbjct: 51  PYATDLKRNPCHFQKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLP 110

Query: 449 VEGTETR 469
           V+GTETR
Sbjct: 111 VQGTETR 117

>CSN5_CANGA (Q6FT36) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 465

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 25/57 (43%), Positives = 37/57 (64%)
 Frame = +2

Query: 296 PHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTET 466
           P  ++   +S LA  K++ HA  GG IE+MG++ G   G++ ++ D F LPVEGTET
Sbjct: 68  PLFYQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTET 124

>CSN5_YEAST (Q12468) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 455

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = +2

Query: 287 ATDPHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGDSIIVMDAFALPVEGTET 466
           +TD   +    IS L+  K+  +A  GG IEIMG++ G    D+I+VMD F LPV GTET
Sbjct: 77  STDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTET 136

Query: 467 R 469
           R
Sbjct: 137 R 137

>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (MAD1)
          Length = 310

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H RAG  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 33  ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGT 80

>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S
           proteasome-associated PAD1 homolog 1)
          Length = 310

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H RAG  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 33  ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGT 80

>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 312

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H RAG  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 35  ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGT 82

>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S proteasome
           regulatory complex subunit p37B) (Yippee-interacting
           protein 5)
          Length = 308

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H RAG  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 31  ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGT 78

>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III|
          Length = 319

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +2

Query: 296 PHHFRRARISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           P       IS+LALLKM+ HAR+G  +E+MGLM G F  D +I V D FA+P  GT
Sbjct: 23  PDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGT 78

>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)|
          Length = 306

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS++ALLKM+ H RAG  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 29  ISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGT 76

>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 308

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H RAG  +E+MGLM G+F  + ++ V+D FA+P  GT
Sbjct: 32  ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGT 79

>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11|
          Length = 311

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H+RAG  +E+MGLM G F  + ++ V+D FA+P  GT
Sbjct: 34  ISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGT 81

>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11|
          Length = 306

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS++ALLKM+ H RAG  +E+MGLM G+F  + ++ V+D FA+P  GT
Sbjct: 29  ISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGT 76

>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)|
          Length = 308

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = +2

Query: 320 ISALALLKMVVHARAGGTIEIMGLMQGKFEGD-SIIVMDAFALPVEGT 460
           IS+LALLKM+ H R G  +E+MGLM G+F  D ++ V+D FA+P  GT
Sbjct: 32  ISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGT 79

>POLG_HCV1 (P26664) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/NT
          Length = 3010

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 396  CMRPMISMVPPARAWTTILRSARAEILAR 310
            C+R +   VPP RAW    RS RA +LAR
Sbjct: 2907 CLRKL--GVPPLRAWRHRARSVRARLLAR 2933

>RFXK_HUMAN (O14593) DNA-binding protein RFXANK (Regulatory factor X subunit B)|
           (RFX-B) (Ankyrin repeat family A protein 1)
          Length = 260

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 284 WATDPHHFRRARISALALLKMVVHARAGGTIEIMGLM 394
           W  DPH   + R SAL+L      A  GG  +I+GL+
Sbjct: 146 WGADPHILAKERESALSL------ASTGGYTDIVGLL 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,057,691
Number of Sequences: 219361
Number of extensions: 504158
Number of successful extensions: 1763
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)