ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC010838.12| Drosophila melanogaster clone BACR13D24, complete sequence Length = 156843 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 103010 ttcttgtcactggaatcaaagtc 103032
>gb|AY312641.1| Drosophila simulans strain DsimFlH10 ATP synthase beta gene, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312640.1| Drosophila simulans strain DsimZimH48 ATP synthase beta gene, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312639.1| Drosophila simulans strain DsimZimH13 ATP synthase beta gene, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312638.1| Drosophila simulans strain DsimFlH13 ATP synthase beta gene, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312637.1| Drosophila simulans strain DsimSey ATP synthase beta gene, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312636.1| Drosophila melanogaster strain Zim53 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312635.1| Drosophila melanogaster strain Zim30 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312634.1| Drosophila melanogaster strain Zim11 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312633.1| Drosophila melanogaster strain Zim2 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312632.1| Drosophila melanogaster strain Crete44 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312631.1| Drosophila melanogaster strain Crete43 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312630.1| Drosophila melanogaster strain Crete42 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312629.1| Drosophila melanogaster strain FTF105 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312628.1| Drosophila melanogaster strain Crete8 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312627.1| Drosophila melanogaster strain FTF1 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312626.1| Drosophila melanogaster strain FTF14 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312625.1| Drosophila melanogaster strain Crete26 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312624.1| Drosophila melanogaster strain Crete24 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312623.1| Drosophila melanogaster strain Crete40 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312622.1| Drosophila melanogaster strain Crete35 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312621.1| Drosophila melanogaster strain Crete30 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312620.1| Drosophila melanogaster strain Crete31 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312619.1| Drosophila melanogaster strain FTF26 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312618.1| Drosophila melanogaster strain FTF23 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312617.1| Drosophila melanogaster strain FTF6 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312616.1| Drosophila melanogaster strain FTF28 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312615.1| Drosophila melanogaster strain FTF5 ATP synthase beta gene, partial cds Length = 1141 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312614.1| Drosophila melanogaster strain FTF2 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>gb|AY312613.1| Drosophila melanogaster strain FTF20 ATP synthase beta gene, partial cds Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 100 ttcttgtcactggaatcaaagtc 122
>emb|X71013.1|DMATPSYNB D.melanogaster mRNA for ATP synthase beta subunit (partial) Length = 1637 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 461 ttcttgtcactggaatcaaagtc 483
>ref|NM_166809.1| Drosophila melanogaster ATP synthase- CG11154-RB, transcript variant B (ATPsyn-beta), mRNA Length = 907 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 605 ttcttgtcactggaatcaaagtc 627
>ref|NM_166808.1| Drosophila melanogaster ATP synthase- CG11154-RA, transcript variant A (ATPsyn-beta), mRNA Length = 2098 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 552 ttcttgtcactggaatcaaagtc 574
>gb|AY118367.1| Drosophila melanogaster RE10864 full insert cDNA Length = 1746 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 552 ttcttgtcactggaatcaaagtc 574
>gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 of 5 of the complete sequence Length = 356494 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 128475 ttcttgtcactggaatcaaagtc 128497
>emb|X86015.1|DMHATPBS1 D.melanogaster H+-ATPase beta subunit gene Length = 5322 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagtc 459 ||||||||||||||||||||||| Sbjct: 3568 ttcttgtcactggaatcaaagtc 3590
>ref|NM_106507.2| Arabidopsis thaliana transcription factor/ zinc ion binding AT1G78600 mRNA, complete cds Length = 1256 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 445 agatttcttctcactggaatcaaagt 470
>gb|AY580189.1| Ephydatia cooperensis ATP synthase beta subunit mRNA, partial cds Length = 1281 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 ttcttgtcactggaatcaaagt 458 |||||||||||||||||||||| Sbjct: 314 ttcttgtcactggaatcaaagt 335
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 22898 agatttcttctcactggaatcaaagt 22873
>gb|AY093108.1| Arabidopsis thaliana highly similar to rice zinc finger protein (At1g78600) mRNA, complete cds Length = 1255 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 445 agatttcttctcactggaatcaaagt 470
>gb|BT006324.1| Arabidopsis thaliana At1g78600 mRNA, complete cds Length = 900 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 286 agatttcttctcactggaatcaaagt 311
>emb|BX816275.1|CNS0ABKR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 582 agatttcttctcactggaatcaaagt 607
>emb|BX817036.1|CNS0ABRX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1335 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 599 agatttcttctcactggaatcaaagt 624
>emb|BX817974.1|CNS0AB9D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 433 agatttcttctcactggaatcaaagt 458
>gb|AY087387.1| Arabidopsis thaliana clone 34830 mRNA, complete sequence Length = 1208 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 agatttcttgtcactggaatcaaagt 458 ||||||||| |||||||||||||||| Sbjct: 439 agatttcttctcactggaatcaaagt 464
>emb|CT025600.8| Mouse DNA sequence from clone RP24-120I22 on chromosome 12, complete sequence Length = 159693 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gattatttgatggacaaggat 189 ||||||||||||||||||||| Sbjct: 28230 gattatttgatggacaaggat 28250
>gb|AC125537.4| Mus musculus BAC clone RP24-165M1 from chromosome 12, complete sequence Length = 167744 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gattatttgatggacaaggat 189 ||||||||||||||||||||| Sbjct: 142648 gattatttgatggacaaggat 142668
>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence Length = 166474 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ctttgaggagcctgaggaca 133 |||||||||||||||||||| Sbjct: 54866 ctttgaggagcctgaggaca 54847
>gb|DQ160119.1| Taraxacum officinale TO102-3 (To102-3) mRNA, partial cds Length = 310 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctgttgttcctcctatgagt 90 |||||||||||||||||||| Sbjct: 233 ctgttgttcctcctatgagt 214
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctgaggacattggcttttt 143 |||||||||||||||||||| Sbjct: 57256 cctgaggacattggcttttt 57275
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ctttgaggagcctgaggaca 133 |||||||||||||||||||| Sbjct: 211955 ctttgaggagcctgaggaca 211936
>gb|AC140788.4| Mus musculus BAC clone RP23-452K24 from chromosome 2, complete sequence Length = 181527 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 agaaaggccaacaggccaga 342 |||||||||||||||||||| Sbjct: 113083 agaaaggccaacaggccaga 113064
>emb|CR536614.5| Zebrafish DNA sequence from clone CH211-154E6 in linkage group 17, complete sequence Length = 155951 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggtaaactttgctgtgtttg 265 |||||||||||||||||||| Sbjct: 63155 ggtaaactttgctgtgtttg 63136
>ref|XM_758978.1| Theileria parva strain Muguga chromosome 4 vacuolar ATP synthase (C/AC39) subunit (TP04_0436) partial mRNA Length = 1320 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 atctgctgttgttcctccta 85 |||||||||||||||||||| Sbjct: 686 atctgctgttgttcctccta 667
>emb|AL136980.5| Human DNA sequence from clone RP11-207C16 on chromosome 9p23-24.3 Contains a novel gene (contains DKFZp434D105, FLJ12580 and KIAA1432), a novel gene and the 3' end of a novel gene (FLJ23309), complete sequence Length = 169562 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aactttgctgtgtttgactc 269 |||||||||||||||||||| Sbjct: 42530 aactttgctgtgtttgactc 42549
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tctgcatcattcctccagtc 226 |||||||||||||||||||| Sbjct: 3912529 tctgcatcattcctccagtc 3912510
>emb|AL831764.16| Mouse DNA sequence from clone RP23-203A3 on chromosome 2, complete sequence Length = 195821 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 caggccagattcaaggcttt 353 |||||||||||||||||||| Sbjct: 128506 caggccagattcaaggcttt 128525
>gb|AC079115.7| Homo sapiens BAC clone RP11-102M8 from 2, complete sequence Length = 177285 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 agaaaggccaacaggccaga 342 |||||||||||||||||||| Sbjct: 19222 agaaaggccaacaggccaga 19203
>emb|AL929262.22| Mouse DNA sequence from clone RP23-452K24 on chromosome 2, complete sequence Length = 145652 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 agaaaggccaacaggccaga 342 |||||||||||||||||||| Sbjct: 77272 agaaaggccaacaggccaga 77253
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cctgaggacattggcttttt 143 |||||||||||||||||||| Sbjct: 73050 cctgaggacattggcttttt 73069
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tgtttggcaaaccggatccg 303 |||||||||||||||||||| Sbjct: 473216 tgtttggcaaaccggatccg 473197
>emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chromosome X, complete sequence Length = 129039 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ctactcatctgcatcattcctcca 223 ||||||||||||||| |||||||| Sbjct: 85583 ctactcatctgcatccttcctcca 85606 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,405,135 Number of Sequences: 3902068 Number of extensions: 4405135 Number of successful extensions: 89882 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89770 Number of HSP's gapped (non-prelim): 112 length of query: 479 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 457 effective length of database: 17,147,199,772 effective search space: 7836270295804 effective search space used: 7836270295804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
