| Clone Name | bast62b01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D03, full insert sequence Length = 1826 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 528 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 587 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 588 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 647 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 648 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 707 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 708 ttcactcttccaatgctgctgacaaccaggagaagct 744 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 282 tgggaacactgcaaaggaagatctcacccagcgcctccttgaagaagaggaaccaaagga 341 |||| |||||| ||| ||||| |||||| ||| ||||||||| ||| |||| ||||| Sbjct: 778 tggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaagga 837 Query: 342 ttgtgaagaa 351 |||||||||| Sbjct: 838 ttgtgaagaa 847
>dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F01, full insert sequence Length = 2721 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 1423 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 1482 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 1483 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 1542 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 1543 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 1602 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 1603 ttcactcttccaatgctgctgacaaccaggagaagct 1639 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 282 tgggaacactgcaaaggaagatctcacccagcgcctccttgaagaagaggaaccaaagga 341 |||| |||||| ||| ||||| |||||| ||| ||||||||| ||| |||| ||||| Sbjct: 1673 tggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaagga 1732 Query: 342 ttgtgaagaa 351 |||||||||| Sbjct: 1733 ttgtgaagaa 1742
>dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C16, full insert sequence Length = 2118 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 540 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 599 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 600 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 659 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 660 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 719 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 720 ttcactcttccaatgctgctgacaaccaggagaagct 756 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 282 tgggaacactgcaaaggaagatctcacccagcgcctccttgaagaagaggaaccaaagga 341 |||| |||||| ||| ||||| |||||| ||| ||||||||| ||| |||| ||||| Sbjct: 790 tggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaagga 849 Query: 342 ttgtgaagaa 351 |||||||||| Sbjct: 850 ttgtgaagaa 859
>dbj|AK064238.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A09, full insert sequence Length = 1443 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 432 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 491 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 492 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 551 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 552 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 611 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 612 ttcactcttccaatgctgctgacaaccaggagaagct 648
>dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G07, full insert sequence Length = 1828 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 528 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 587 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 588 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 647 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 648 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 707 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 708 ttcactcttccaatgctgctgacaaccaggagaagct 744 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 282 tgggaacactgcaaaggaagatctcacccagcgcctccttgaagaagaggaaccaaagga 341 |||| |||||| ||| ||||| |||||| ||| ||||||||| ||| |||| ||||| Sbjct: 778 tggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaagga 837 Query: 342 ttgtgaagaa 351 |||||||||| Sbjct: 838 ttgtgaagaa 847
>dbj|AK061171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B06, full insert sequence Length = 1551 Score = 264 bits (133), Expect = 2e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 509 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 568 Query: 101 gtctcaaggttgtcatagggacgacactgaactattttctggacggccggatcaacaggg 160 | || ||||||||||||||||| ||||||||||||||||| || ||||||||||||| || Sbjct: 569 gcctgaaggttgtcatagggacaacactgaactattttctcgatggccggatcaacaagg 628 Query: 161 cggaggttcttttccccggcgtcggatgttttctgattgcagcgtgcctaggctcacttg 220 ||||| ||||||||||||| |||||||| |||||||||||||| ||||| || || |||| Sbjct: 629 cggagattcttttccccggtgtcggatgctttctgattgcagcctgccttggatctcttg 688 Query: 221 tccactcctctaatgctgctgacaatcaggagaagct 257 | ||||| || |||||||||||||| ||||||||||| Sbjct: 689 ttcactcttccaatgctgctgacaaccaggagaagct 725 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 282 tgggaacactgcaaaggaagatctcacccagcgcctccttgaagaagaggaaccaaagga 341 |||| |||||| ||| ||||| |||||| ||| ||||||||| ||| |||| ||||| Sbjct: 759 tggggacactgaaaatgaagaactcaccaagcacctccttgagatagaacaacccaagga 818 Query: 342 ttgtgaagaa 351 |||||||||| Sbjct: 819 ttgtgaagaa 828
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 117 agggacgacactgaactattttctggacggccggatcaacagggcggaggttcttttccc 176 |||||| ||||||||||||||||| || ||||||||||||| ||||||| |||||||||| Sbjct: 19224584 agggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccc 19224525 Query: 177 cggcgtcggatgttttctgattgcagcgtgcctaggctcacttgtccactcctctaatgc 236 ||| |||||||| |||||||||||||| ||||| || || ||||| ||||| || ||||| Sbjct: 19224524 cggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgc 19224465 Query: 237 tgctgacaatcaggagaagct 257 ||||||||| ||||||||||| Sbjct: 19224464 tgctgacaaccaggagaagct 19224444 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 19224784 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 19224725 Query: 101 gtctcaaggttgtcatagg 119 | || |||||||||||||| Sbjct: 19224724 gcctgaaggttgtcatagg 19224706
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 117 agggacgacactgaactattttctggacggccggatcaacagggcggaggttcttttccc 176 |||||| ||||||||||||||||| || ||||||||||||| ||||||| |||||||||| Sbjct: 19150811 agggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccc 19150752 Query: 177 cggcgtcggatgttttctgattgcagcgtgcctaggctcacttgtccactcctctaatgc 236 ||| |||||||| |||||||||||||| ||||| || || ||||| ||||| || ||||| Sbjct: 19150751 cggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgc 19150692 Query: 237 tgctgacaatcaggagaagct 257 ||||||||| ||||||||||| Sbjct: 19150691 tgctgacaaccaggagaagct 19150671 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 19151011 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 19150952 Query: 101 gtctcaaggttgtcatagg 119 | || |||||||||||||| Sbjct: 19150951 gcctgaaggttgtcatagg 19150933
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 117 agggacgacactgaactattttctggacggccggatcaacagggcggaggttcttttccc 176 |||||| ||||||||||||||||| || ||||||||||||| ||||||| |||||||||| Sbjct: 1361 agggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccc 1420 Query: 177 cggcgtcggatgttttctgattgcagcgtgcctaggctcacttgtccactcctctaatgc 236 ||| |||||||| |||||||||||||| ||||| || || ||||| ||||| || ||||| Sbjct: 1421 cggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgc 1480 Query: 237 tgctgacaatcaggagaagct 257 ||||||||| ||||||||||| Sbjct: 1481 tgctgacaaccaggagaagct 1501 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 1161 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 1220 Query: 101 gtctcaaggttgtcatagg 119 | || |||||||||||||| Sbjct: 1221 gcctgaaggttgtcatagg 1239
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 117 agggacgacactgaactattttctggacggccggatcaacagggcggaggttcttttccc 176 |||||| ||||||||||||||||| || ||||||||||||| ||||||| |||||||||| Sbjct: 57914 agggacaacactgaactattttctcgatggccggatcaacaaggcggagattcttttccc 57855 Query: 177 cggcgtcggatgttttctgattgcagcgtgcctaggctcacttgtccactcctctaatgc 236 ||| |||||||| |||||||||||||| ||||| || || ||||| ||||| || ||||| Sbjct: 57854 cggtgtcggatgctttctgattgcagcctgccttggatctcttgttcactcttccaatgc 57795 Query: 237 tgctgacaatcaggagaagct 257 ||||||||| ||||||||||| Sbjct: 57794 tgctgacaaccaggagaagct 57774 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 41 tggccacgcagtacggctgggcatacgtcgggctttcggtcaccgaggtcatggcctcaa 100 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 58114 tggccacgcagtacgggtgggcgttcgtcgggctttcggtcaccgaggtcatggcgtcaa 58055 Query: 101 gtctcaaggttgtcatagg 119 | || |||||||||||||| Sbjct: 58054 gcctgaaggttgtcatagg 58036
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 cgctggcgggcggcgtggtgatc 27 ||||||||||||||||||||||| Sbjct: 1695353 cgctggcgggcggcgtggtgatc 1695375
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 atcaccctcggcaccgtggcc 45 ||||||||||||||||||||| Sbjct: 1788735 atcaccctcggcaccgtggcc 1788755
>gb|AC109145.11| Mus musculus chromosome 1, clone RP23-109O14, complete sequence Length = 186661 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 gaggaaccaaaggattgtgaagaa 351 |||||||||||||| ||||||||| Sbjct: 12334 gaggaaccaaaggactgtgaagaa 12357
>gb|AC147514.12| Mus musculus chromosome 1, clone RP23-442A6, complete sequence Length = 187725 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 gaggaaccaaaggattgtgaagaa 351 |||||||||||||| ||||||||| Sbjct: 126948 gaggaaccaaaggactgtgaagaa 126925
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 609345 gcgctggcgggcggcgtggt 609326 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 401679 gcgctggcgggcggcgtggt 401660
>gb|AC138318.7| Mus musculus chromosome 3, clone RP23-358I23, complete sequence Length = 201126 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 ggagaagctatcaaactccagaaa 272 ||||||| |||||||||||||||| Sbjct: 130579 ggagaagatatcaaactccagaaa 130556
>gb|AC157088.2| Pan troglodytes BAC clone CH251-497H13 from chromosome unknown, complete sequence Length = 220527 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tactctactgggaacactgc 293 |||||||||||||||||||| Sbjct: 19838 tactctactgggaacactgc 19857
>gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosome 3, complete sequence Length = 180525 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 ggagaagctatcaaactccagaaa 272 ||||||| |||||||||||||||| Sbjct: 3799 ggagaagatatcaaactccagaaa 3776
>emb|CR376861.6| Zebrafish DNA sequence from clone CH211-193L9 in linkage group 14, complete sequence Length = 38313 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tccactcctctaatgctgct 240 |||||||||||||||||||| Sbjct: 33465 tccactcctctaatgctgct 33446
>gb|AC137837.3| Medicago truncatula clone mth2-30e7, complete sequence Length = 79015 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 aagcctgcactaccaaaggc 374 |||||||||||||||||||| Sbjct: 64231 aagcctgcactaccaaaggc 64250 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 aagcctgcactaccaaaggc 374 |||||||||||||||||||| Sbjct: 57385 aagcctgcactaccaaaggc 57404
>emb|AL109965.34|HS1121G12 Human DNA sequence from clone RP5-1121G12 on chromosome 20 Contains the 3' end of the C20orf104 gene, the SCAND1 gene for SCAN domain containing 1, the 5' end of the C20orf152 gene and two CpG islands, complete sequence Length = 105230 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tactctactgggaacactgc 293 |||||||||||||||||||| Sbjct: 10550 tactctactgggaacactgc 10531
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 266071 gcgctggcgggcggcgtggt 266052 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 59712 gcgctggcgggcggcgtggt 59693
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 266129 gcgctggcgggcggcgtggt 266110 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgctggcgggcggcgtggt 23 |||||||||||||||||||| Sbjct: 59649 gcgctggcgggcggcgtggt 59630
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tccactcctctaatgctgct 240 |||||||||||||||||||| Sbjct: 21492 tccactcctctaatgctgct 21511
>gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete sequence Length = 127094 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 aagcctgcactaccaaaggc 374 |||||||||||||||||||| Sbjct: 61687 aagcctgcactaccaaaggc 61668 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 aagcctgcactaccaaaggc 374 |||||||||||||||||||| Sbjct: 54841 aagcctgcactaccaaaggc 54822
>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence Length = 165022 Score = 40.1 bits (20), Expect = 5.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 248 aggagaagctatcaaactc-cagaaact 274 ||||||||||||||||||| |||||||| Sbjct: 151041 aggagaagctatcaaactctcagaaact 151014
>ref|XM_684151.1| PREDICTED: Danio rerio similar to raptor (LOC560746), mRNA Length = 5226 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tccactcctctaatgctgct 240 |||||||||||||||||||| Sbjct: 4258 tccactcctctaatgctgct 4239
>gb|AC005599.5|AC005599 Homo sapiens chromosome 4 clone C0026P05 map 4P16, complete sequence Length = 145173 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 acactgaactattttctgga 143 |||||||||||||||||||| Sbjct: 111099 acactgaactattttctgga 111118 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,092,736 Number of Sequences: 3902068 Number of extensions: 3092736 Number of successful extensions: 53474 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 53255 Number of HSP's gapped (non-prelim): 220 length of query: 387 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 365 effective length of database: 17,147,199,772 effective search space: 6258727916780 effective search space used: 6258727916780 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)