ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ606019.1| Triticum aestivum partial mRNA for putative cycl... 214 2e-52
2ref|XM_475474.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
3gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 90 7e-15
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
5dbj|AK107486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
6gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
7gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
8gb|AY109811.1| Zea mays CL2527_1 mRNA sequence 60 7e-06
9gb|U10078.1|ZMU10078 Zea mays B73 cyclin IbZm mRNA, complete cds 60 7e-06
10gb|AY104310.1| Zea mays PCO130346 mRNA sequence 48 0.025
11ref|XM_469975.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.39
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
14gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 44 0.39
15dbj|AK067130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
16ref|XM_479824.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
17gb|AE005866.1| Caulobacter crescentus CB15 section 192 of 359 of... 42 1.5
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcom... 40 6.1
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.1
23ref|XM_478944.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
24ref|XM_478476.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
25ref|XM_430044.1| PREDICTED: Gallus gallus LOC423332 (LOC423332),... 40 6.1
26gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.1
27emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
28emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
29emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
30emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
31emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 40 6.1
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.1
33dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34dbj|AB116646.1| Streptomyces albulus kat gene for kanamycin acet... 40 6.1
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
36dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
37dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.1
38dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
39dbj|AK109058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
40dbj|AK069813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1 
>emb|AJ606019.1| Triticum aestivum partial mRNA for putative cyclin (ibZm gene)
          Length = 452

 Score =  214 bits (108), Expect = 2e-52
 Identities = 167/186 (89%), Gaps = 3/186 (1%)
 Strand = Plus / Plus

                                                                       
Query: 267 aacagaggtgccgtaggcccggcagggaagcagaagggcgccgccgccggtggccgcgtt 326
           ||||||||||||| ||  ||||||||||||||||||| ||||| || | |   || || |
Sbjct: 1   aacagaggtgccgcagtaccggcagggaagcagaaggacgccggcggccg---ccccggt 57

                                                                       
Query: 327 gcgggaggaaacaggcgggtgctaggggacatcggcaacgtcgtccacgccaacgtcctc 386
           |||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 58  gcgggagggaacaggcgggtgctcggggacatcggcaacgtcgtccacgcccacgtcctc 117

                                                                       
Query: 387 gacggcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgct 446
           ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||
Sbjct: 118 gacggcaagatccagctgccggcggggataaatcgcccaatcaccaggagcttcggtgct 177

                 
Query: 447 cagctc 452
           ||||||
Sbjct: 178 cagctc 183
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>ref|XM_475474.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1566

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 385 tcgacggcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcg 444
           |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 350 tcgacggcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcg 409

                  
Query: 445 ctcagct 451
           | |||||
Sbjct: 410 cccagct 416
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                          
Query: 391    gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
              |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 164891 gcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcgcccagc 164950

               
Query: 451    t 451
              |
Sbjct: 164951 t 164951



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                        
Query: 235    accagcacgcggctgccgctccgcagccggccaacagaggtg 276
              |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 164241 accagcgcgcggctgccgctccgcagccggcgaacagaggtg 164282



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                          
Query: 391    gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
              |||||||  ||||||||| |||||||||||| || |||||| ||||||||||||| ||||
Sbjct: 184159 gcaagatgtagctgccggaggggatcaatcgccccatcaccaggagcttcggcgcccagc 184100

               
Query: 451    t 451
              |
Sbjct: 184099 t 184099
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                            
Query: 391      gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
                |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 24096402 gcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcgcccagc 24096461

                 
Query: 451      t 451
                |
Sbjct: 24096462 t 24096462



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                            
Query: 391      gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
                |||||||||||||||||| |||||||||||| || |||||| ||||||||||||| ||||
Sbjct: 24530487 gcaagatccagctgccggaggggatcaatcgccccatcaccaggagcttcggcgcccagc 24530428

                 
Query: 451      t 451
                |
Sbjct: 24530427 t 24530427



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 235      accagcacgcggctgccgctccgcagccggccaacagaggtg 276
                |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 24095752 accagcgcgcggctgccgctccgcagccggcgaacagaggtg 24095793



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 391      gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
                |||||||  ||||||||| |||||||||||| || |||||| ||||||||||||| ||||
Sbjct: 24115670 gcaagatgtagctgccggaggggatcaatcgccccatcaccaggagcttcggcgcccagc 24115611

                 
Query: 451      t 451
                |
Sbjct: 24115610 t 24115610
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>dbj|AK107486.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C09, full
            insert sequence
          Length = 3074

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                        
Query: 391  gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
            |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 1883 gcaagatccagctgccggaggggatcaatcgcccaatcaccaggagcttcggcgcccagc 1824

             
Query: 451  t 451
            |
Sbjct: 1823 t 1823



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 235  accagcacgcggctgccgctccgcagccggccaacagaggtg 276
            |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 2533 accagcgcgcggctgccgctccgcagccggcgaacagaggtg 2492
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                         
Query: 391   gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
             |||||||||||||||||| |||||||||||| || |||||| ||||||||||||| ||||
Sbjct: 44669 gcaagatccagctgccggaggggatcaatcgccccatcaccaggagcttcggcgcccagc 44610

              
Query: 451   t 451
             |
Sbjct: 44609 t 44609
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
            complete sequence
          Length = 121466

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 391  gcaagatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagc 450
            |||||||  ||||||||| |||||||||||| || |||||| ||||||||||||| ||||
Sbjct: 1909 gcaagatgtagctgccggaggggatcaatcgccccatcaccaggagcttcggcgcccagc 1850

             
Query: 451  t 451
            |
Sbjct: 1849 t 1849
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>gb|AY109811.1| Zea mays CL2527_1 mRNA sequence
          Length = 1687

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 395 gatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagctc 452
           |||| ||||||||| ||||||| |||| || |||||| ||||||||||||| ||||||
Sbjct: 240 gatcaagctgccggaggggatccatcgccccatcaccaggagcttcggcgcccagctc 297



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 246 gctgccgctccgcagccggccaacagaggtgccg 279
           |||||||||||||||||||| |||||||||||||
Sbjct: 112 gctgccgctccgcagccggcgaacagaggtgccg 145
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>gb|U10078.1|ZMU10078 Zea mays B73 cyclin IbZm mRNA, complete cds
          Length = 1679

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 395 gatccagctgccggcggggatcaatcggccaatcacccggagcttcggcgctcagctc 452
           |||| ||||||||| ||||||| |||| || |||||| ||||||||||||| ||||||
Sbjct: 240 gatcaagctgccggaggggatccatcgccccatcaccaggagcttcggcgcccagctc 297



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 246 gctgccgctccgcagccggccaacagaggtgccg 279
           |||||||||||||||||||| |||||||||||||
Sbjct: 112 gctgccgctccgcagccggcgaacagaggtgccg 145
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>gb|AY104310.1| Zea mays PCO130346 mRNA sequence
          Length = 1970

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 413 gatcaatcggccaatcacccggagcttcggcgctcagctc 452
           ||||||||| || ||||| || ||||||||||||||||||
Sbjct: 473 gatcaatcgccccatcacgcgaagcttcggcgctcagctc 512



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgcggctgccgctccgcagc 261
           ||||||||||||||||||||
Sbjct: 299 cgcggctgccgctccgcagc 318
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>ref|XM_469975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3170

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 303 ggcgccgccgccggtggccgcg 324
           ||||||||||||||||||||||
Sbjct: 84  ggcgccgccgccggtggccgcg 63
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 303      ggcgccgccgccggtggccgcg 324
                ||||||||||||||||||||||
Sbjct: 33133906 ggcgccgccgccggtggccgcg 33133885
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 303      ggcgccgccgccggtggccgcg 324
                ||||||||||||||||||||||
Sbjct: 33224416 ggcgccgccgccggtggccgcg 33224395
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>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 303    ggcgccgccgccggtggccgcg 324
              ||||||||||||||||||||||
Sbjct: 110649 ggcgccgccgccggtggccgcg 110670
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>dbj|AK067130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098N20, full
           insert sequence
          Length = 3168

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 303 ggcgccgccgccggtggccgcg 324
           ||||||||||||||||||||||
Sbjct: 134 ggcgccgccgccggtggccgcg 113
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>ref|XM_479824.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 304 gcgccgccgccggtggccgcgttgc 328
           |||||| ||||||||||||||||||
Sbjct: 320 gcgccgtcgccggtggccgcgttgc 296
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>gb|AE005866.1| Caulobacter crescentus CB15 section 192 of 359 of the complete genome
          Length = 11992

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  cgccgccgccggtggccgcgt 325
            |||||||||||||||||||||
Sbjct: 1819 cgccgccgccggtggccgcgt 1799
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 304     gcgccgccgccggtggccgcgttgc 328
               |||||| ||||||||||||||||||
Sbjct: 1098945 gcgccgtcgccggtggccgcgttgc 1098969
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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1203H11
          Length = 156561

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 304   gcgccgccgccggtggccgcgttgc 328
             |||||| ||||||||||||||||||
Sbjct: 12182 gcgccgtcgccggtggccgcgttgc 12206
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_B05
          Length = 144799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 304    gcgccgccgccggtggccgcgttgc 328
              |||||| ||||||||||||||||||
Sbjct: 127472 gcgccgtcgccggtggccgcgttgc 127496
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>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene
             cluster, partial sequence
          Length = 85915

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   ggcgccgccgccggtggccg 322
             ||||||||||||||||||||
Sbjct: 38471 ggcgccgccgccggtggccg 38452
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gccgccgccggtggccgcgt 325
              ||||||||||||||||||||
Sbjct: 357918 gccgccgccggtggccgcgt 357899
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>ref|XM_478944.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 962

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 cgccgccgccggtggccgcg 324
           ||||||||||||||||||||
Sbjct: 393 cgccgccgccggtggccgcg 412
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>ref|XM_478476.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1621

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 cgccgccgccggtggccgcg 324
           ||||||||||||||||||||
Sbjct: 280 cgccgccgccggtggccgcg 261
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>ref|XM_430044.1| PREDICTED: Gallus gallus LOC423332 (LOC423332), mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 ctttgaacggagccggaaca 208
           ||||||||||||||||||||
Sbjct: 403 ctttgaacggagccggaaca 384
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 305     cgccgccgccggtggccgcgttgcggga 332
               |||||| ||||||||||| |||||||||
Sbjct: 3762042 cgccgctgccggtggccgtgttgcggga 3762015
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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ggcgccgccgccggtggccg 322
             ||||||||||||||||||||
Sbjct: 59001 ggcgccgccgccggtggccg 59020
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ggcgccgccgccggtggccg 322
              ||||||||||||||||||||
Sbjct: 182460 ggcgccgccgccggtggccg 182441
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ggcgccgccgccggtggccg 322
              ||||||||||||||||||||
Sbjct: 325090 ggcgccgccgccggtggccg 325109
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ggcgccgccgccggtggccg 322
              ||||||||||||||||||||
Sbjct: 136930 ggcgccgccgccggtggccg 136911
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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  tccatgaccagcacgcggct 248
            ||||||||||||||||||||
Sbjct: 3446 tccatgaccagcacgcggct 3427
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 401     gctgccggcggggatcaatc 420
               ||||||||||||||||||||
Sbjct: 1332269 gctgccggcggggatcaatc 1332250
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 305      cgccgccgccggtggccgcg 324
                ||||||||||||||||||||
Sbjct: 23943416 cgccgccgccggtggccgcg 23943435



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 305      cgccgccgccggtggccgcg 324
                ||||||||||||||||||||
Sbjct: 20470436 cgccgccgccggtggccgcg 20470417
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>dbj|AB116646.1| Streptomyces albulus kat gene for kanamycin acetyltransferase,
            complete cds
          Length = 5090

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  cggctgccgctccgcagccg 263
            ||||||||||||||||||||
Sbjct: 3362 cggctgccgctccgcagccg 3343
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 302     gggcgccgccgccggtggcc 321
               ||||||||||||||||||||
Sbjct: 2064289 gggcgccgccgccggtggcc 2064308
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>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0005G07
          Length = 142850

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   cgccgccgccggtggccgcg 324
             ||||||||||||||||||||
Sbjct: 98343 cgccgccgccggtggccgcg 98362
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 297     cagaagggcgccgccgccgg 316
               ||||||||||||||||||||
Sbjct: 2680908 cagaagggcgccgccgccgg 2680927
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>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077J18
          Length = 180944

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   cgccgccgccggtggccgcg 324
             ||||||||||||||||||||
Sbjct: 51546 cgccgccgccggtggccgcg 51527
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>dbj|AK109058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E12, full
           insert sequence
          Length = 1621

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 cgccgccgccggtggccgcg 324
           ||||||||||||||||||||
Sbjct: 280 cgccgccgccggtggccgcg 261
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>dbj|AK069813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F23, full
           insert sequence
          Length = 962

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 cgccgccgccggtggccgcg 324
           ||||||||||||||||||||
Sbjct: 393 cgccgccgccggtggccgcg 412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,707,493
Number of Sequences: 3902068
Number of extensions: 2707493
Number of successful extensions: 52125
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51261
Number of HSP's gapped (non-prelim): 863
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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