ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62a09 |
|---|---|
| Clone Library Name | barley_pub |
>RL13A_PICMA (O65055) 60S ribosomal protein L13a| Length = 206 Score = 242 bits (617), Expect = 4e-64 Identities = 116/130 (89%), Positives = 125/130 (96%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQ+MKYL Sbjct: 1 MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT RG AALA L+A+EGVPPPYDR Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRK 120 Query: 427 KRMVIPDALR 456 KRMVIPDAL+ Sbjct: 121 KRMVIPDALK 130
>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2| Length = 206 Score = 239 bits (611), Expect = 2e-63 Identities = 112/130 (86%), Positives = 123/130 (94%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQ+MKY+ Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EGVPPPYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120 Query: 427 KRMVIPDALR 456 KRMVIPDAL+ Sbjct: 121 KRMVIPDALK 130
>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4| Length = 206 Score = 239 bits (610), Expect = 3e-63 Identities = 112/130 (86%), Positives = 123/130 (94%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQ+MKY+ Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK YEGVP PYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120 Query: 427 KRMVIPDALR 456 KRMVIPDAL+ Sbjct: 121 KRMVIPDALK 130
>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3| Length = 206 Score = 237 bits (604), Expect = 1e-62 Identities = 111/130 (85%), Positives = 121/130 (93%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+CAKRVVVD RHHMLGRLAS AKELLNGQ VVVVRCEEIC+SGGLVRQ+MKY+ Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EG+PPPYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120 Query: 427 KRMVIPDALR 456 KRMVIPDAL+ Sbjct: 121 KRMVIPDALK 130
>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1| Length = 206 Score = 235 bits (600), Expect = 4e-62 Identities = 109/130 (83%), Positives = 122/130 (93%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQ+MKY+ Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG ALARLK +EGVP PYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120 Query: 427 KRMVIPDALR 456 KRMV+PDAL+ Sbjct: 121 KRMVVPDALK 130
>RL13A_LUPLU (O49885) 60S ribosomal protein L13a| Length = 205 Score = 225 bits (573), Expect = 5e-59 Identities = 108/130 (83%), Positives = 121/130 (93%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQ+MKYL Sbjct: 1 MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 426 RFLRKRMNTKPSHGPIH AP+KI WRT+RGMIPHKT RGE ALARLK YEG+PPP+D+ Sbjct: 61 RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 119 Query: 427 KRMVIPDALR 456 KR+V+PDAL+ Sbjct: 120 KRLVVPDALK 129
>RL13A_CYAPA (P93099) 60S ribosomal protein L13a| Length = 200 Score = 180 bits (456), Expect = 2e-45 Identities = 88/121 (72%), Positives = 100/121 (82%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNT 273 K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R ++K+ FL+KRMNT Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63 Query: 274 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 453 P GP HFR+PA+ILWRTIRGMIPHKT RG AAL RLKA+EGVPPPYD+ KRMVIP AL Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123 Query: 454 R 456 R Sbjct: 124 R 124
>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a| Length = 202 Score = 172 bits (437), Expect = 3e-43 Identities = 78/119 (65%), Positives = 100/119 (84%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a| Length = 202 Score = 172 bits (436), Expect = 4e-43 Identities = 78/119 (65%), Positives = 100/119 (84%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a| Length = 202 Score = 172 bits (436), Expect = 4e-43 Identities = 78/119 (65%), Positives = 100/119 (84%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)| Length = 202 Score = 172 bits (436), Expect = 4e-43 Identities = 78/119 (65%), Positives = 100/119 (84%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)| Length = 137 Score = 172 bits (436), Expect = 4e-43 Identities = 78/119 (65%), Positives = 100/119 (84%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P AL+ Sbjct: 63 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 121
>RL13A_RAT (P35427) 60S ribosomal protein L13a| Length = 202 Score = 171 bits (434), Expect = 7e-43 Identities = 78/119 (65%), Positives = 99/119 (83%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALK 124
>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)| (Tum-P198 antigen) Length = 202 Score = 171 bits (433), Expect = 9e-43 Identities = 78/119 (65%), Positives = 99/119 (83%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R ++KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P AL+ Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALK 124
>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A| Length = 204 Score = 169 bits (429), Expect = 3e-42 Identities = 75/126 (59%), Positives = 100/126 (79%) Frame = +1 Query: 79 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLR 258 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG R ++K++ FLR Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 61 Query: 259 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 438 KR N P+ GP HFRAP+KILW+T+RGMIPHKT RG++AL RL+AY+G PPPYD +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVV 121 Query: 439 IPDALR 456 +P ALR Sbjct: 122 VPAALR 127
>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A| Length = 204 Score = 166 bits (421), Expect = 2e-41 Identities = 73/126 (57%), Positives = 99/126 (78%) Frame = +1 Query: 79 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLR 258 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG R ++K++ FLR Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLR 61 Query: 259 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 438 KR N P+ GP HFRAP+KILW+T+RGMIPHKT RG+ AL RL++Y+G PPPYD +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVV 121 Query: 439 IPDALR 456 +P ALR Sbjct: 122 VPAALR 127
>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198| homolog) (Fragment) Length = 189 Score = 163 bits (412), Expect = 2e-40 Identities = 75/111 (67%), Positives = 92/111 (82%) Frame = +1 Query: 124 MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKPSHGPIHFR 303 +LGRLA+IVA E+L G +VVVVRCE I +SG R ++KYL FLRKRMNT PS GP HFR Sbjct: 1 LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60 Query: 304 APAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 AP++I WRT+RGM+PHKT RG+AAL RLK ++GVPPPYD+ KRMV+P AL+ Sbjct: 61 APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALK 111
>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A| Length = 205 Score = 158 bits (400), Expect = 6e-39 Identities = 70/126 (55%), Positives = 99/126 (78%) Frame = +1 Query: 79 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLR 258 +G+ + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG R ++K+L +LR Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61 Query: 259 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 438 KR N P+ GP HFRAP++I ++ +RGMIPHKT RG+AALARL+ ++G+P PYD+ +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVV 121 Query: 439 IPDALR 456 +P A+R Sbjct: 122 VPIAMR 127
>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B| Length = 197 Score = 157 bits (398), Expect = 1e-38 Identities = 73/121 (60%), Positives = 96/121 (79%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNT 273 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG R ++KYL +LRK Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 274 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 453 PS G HFRAP++I + +RGM+PHKTARG+AAL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125 Query: 454 R 456 R Sbjct: 126 R 126
>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A| Length = 197 Score = 157 bits (398), Expect = 1e-38 Identities = 73/121 (60%), Positives = 96/121 (79%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNT 273 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG R ++KYL +LRK Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 274 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 453 PS G HFRAP++I + +RGM+PHKTARG+AAL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125 Query: 454 R 456 R Sbjct: 126 R 126
>RL16_NEUCR (Q9P720) 60S ribosomal protein L16| Length = 202 Score = 157 bits (397), Expect = 1e-38 Identities = 74/120 (61%), Positives = 95/120 (79%), Gaps = 1/120 (0%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG R ++KY +LRK P Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67 Query: 280 SHG-PIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 + G P HFRAP++I ++ +RGMIPHKTARG AAL RLK +EGVPPPYD+ K+MV+P ALR Sbjct: 68 TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALR 127
>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a| Length = 202 Score = 153 bits (387), Expect = 2e-37 Identities = 70/126 (55%), Positives = 92/126 (73%) Frame = +1 Query: 82 GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRK 261 G+ + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG R ++KY+ FLRK Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61 Query: 262 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 441 R N P+ G H+RAP KI WRT+RGM+PHKT RG AL L+AYEGVP Y +TK + Sbjct: 62 RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121 Query: 442 PDALRF 459 P A RF Sbjct: 122 PSASRF 127
>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)| Length = 198 Score = 152 bits (385), Expect = 3e-37 Identities = 69/119 (57%), Positives = 94/119 (78%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG R ++KY FLRK Sbjct: 6 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 + GP HFRAP++I ++ +RGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P ALR Sbjct: 66 TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALR 124
>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)| Length = 197 Score = 152 bits (384), Expect = 4e-37 Identities = 70/119 (58%), Positives = 94/119 (78%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG R ++KY FLRK Sbjct: 5 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALR 456 + GP HFRAP++IL++ IRGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P ALR Sbjct: 65 TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALR 123
>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C| Length = 197 Score = 150 bits (380), Expect = 1e-36 Identities = 69/121 (57%), Positives = 92/121 (76%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNT 273 K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG R ++KYL +LRK Sbjct: 6 KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 274 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 453 PS G HFRAP++I + +RGM+PHKT RG AL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAAL 125 Query: 454 R 456 R Sbjct: 126 R 126
>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal| protein L13P; 30S ribosomal protein S9P] Length = 282 Score = 84.7 bits (208), Expect = 1e-16 Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 ++++ H+LGRLAS+V+K+LL G+ V+V+ E+I ++G KY + + + + P Sbjct: 4 MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63 Query: 280 SH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 450 GP + R P I RT+RGM+P+K ++G A LKAY G+P + + + IPDA Sbjct: 64 RRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA 121
>RL13_ARCFU (O29137) 50S ribosomal protein L13P| Length = 156 Score = 84.0 bits (206), Expect = 2e-16 Identities = 48/117 (41%), Positives = 68/117 (58%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKPS 282 V+DA H+LGRL+S +AK LLNG+R+VVV E+ ++G + M + R+ K Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74 Query: 283 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 453 GP R P +I RT+RGM+P K++RG A RL+ + GVP + I DAL Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGREFEKIEDAL 131
>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P| Length = 142 Score = 79.0 bits (193), Expect = 6e-15 Identities = 46/116 (39%), Positives = 65/116 (56%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKPS 282 +++A +LGRLAS VAK LL G+ VV+V E+ ++G KY + R T P Sbjct: 3 IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62 Query: 283 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 450 GP + + +I+ RTIRGM+P KT RG A RLK Y G+P + + I +A Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEA 118
>RL13_PYRHO (O59300) 50S ribosomal protein L13P| Length = 142 Score = 78.6 bits (192), Expect = 8e-15 Identities = 46/116 (39%), Positives = 65/116 (56%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKPS 282 +++A +LGRLAS VAK LL G+ VV+V E+ ++G KY + R T P Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62 Query: 283 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 450 GP + + +I+ RTIRGM+P KT RG A RLK Y G+P + + I +A Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEA 118
>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P| Length = 155 Score = 72.8 bits (177), Expect = 4e-13 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 2/122 (1%) Frame = +1 Query: 91 AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMN 270 A+ +VVD ++GRLAS+VAK LL G RV VV E+I +SG R ++ R + Sbjct: 8 AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD-PRMVVESYRTTVLGVK 66 Query: 271 TKPSH--GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 444 + SH P R P ++ +RGM+P ARG ALARL+ Y GVP + + P Sbjct: 67 SHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFP 126 Query: 445 DA 450 +A Sbjct: 127 EA 128
>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)| Length = 145 Score = 68.9 bits (167), Expect = 6e-12 Identities = 41/107 (38%), Positives = 62/107 (57%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 V+VDAR ++GR+AS VA++ L+G+ V VV E ++G +E + + KR++ Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITG----REEQIVEKYEKRVDIGN 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 420 +G + + P I RTIRGM+PHK RG A ++ Y G PYD Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYD 110
>RL13_METJA (P54023) 50S ribosomal protein L13P| Length = 137 Score = 66.6 bits (161), Expect = 3e-11 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKPS 282 V+DA +LGRLAS VAK +L G+ +V+V E + ++G Y K+ P Sbjct: 3 VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITGNKDWIIKTYQEEREKKNVANPR 62 Query: 283 H-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 408 GP R P IL RTIR M+P+K +G A R+K Y G P Sbjct: 63 RFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP 105
>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P| Length = 145 Score = 65.9 bits (159), Expect = 5e-11 Identities = 42/107 (39%), Positives = 55/107 (51%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 VVVDAR ++GR+AS VA+ L G RV VV E+ ++G E R R N Sbjct: 10 VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65 Query: 280 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 420 GP + + P I R IRGM+P+K G AL ++ Y G P D Sbjct: 66 DRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDED 112
>RL13_SULSO (P95991) 50S ribosomal protein L13P| Length = 149 Score = 63.9 bits (154), Expect = 2e-10 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYLRFLRKRMNTKP 279 V+++A +LGR+AS V + L G++V++V E+ +SG R Y L + P Sbjct: 10 VIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNP 69 Query: 280 SHGPIHF-RAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 450 I R+P I+ RTIRGM+P K+++G L +K Y GVP ++ + + PD+ Sbjct: 70 YRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS 126
>RL13_SULAC (P39473) 50S ribosomal protein L13P| Length = 148 Score = 62.8 bits (151), Expect = 4e-10 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQEMKY-LRFLRKRMNTK 276 V+VDA + +LGR+++ +AK L +G++V VV E+ +SG R Y L F K M Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67 Query: 277 PSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 450 G R P I+ RT+RGM+P K G+ LKAY G+P + + DA Sbjct: 68 YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELEGKSMIRFDDA 124
>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13| Length = 149 Score = 46.6 bits (109), Expect = 3e-05 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 20/141 (14%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M+ V K VVDA +LGRLA+ +AK L+ G V+VV +++ + Sbjct: 12 MIKPEEVERKWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVL 71 Query: 211 SGGLVRQEMKY--------LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARG 366 +G + Q++ Y L+ L R + + P +++W ++ M+P K +G Sbjct: 72 TGKKLDQKVYYWHSGYPGGLKSLTARQMLE--------KHPERLIWLAVKRMLP-KNRKG 122 Query: 367 EAALARLKAYEGVPPPYDRTK 429 L RLK Y P+ K Sbjct: 123 RKMLKRLKVYASPEHPHQAQK 143
>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)| Length = 250 Score = 43.1 bits (100), Expect = 4e-04 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 12/129 (9%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQEM 237 K VVDA +LGR+AS +A K L + G V+VV +++ +SG Q++ Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172 Query: 238 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 R + + + R P +I+ +RGM+P K G LK Y+G P+ Sbjct: 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP-KGRLGRYLFNHLKVYKGAEHPH 231 Query: 418 DRTKRMVIP 444 + + +P Sbjct: 232 QAQQPIDLP 240
>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13| Length = 145 Score = 42.7 bits (99), Expect = 5e-04 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G R +M Y S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKERDKMYYRHSNHPGGIKSISAGELKANNPERLLENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STRCO (Q53874) 50S ribosomal protein L13| Length = 147 Score = 42.7 bits (99), Expect = 5e-04 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 12/117 (10%) Frame = +1 Query: 103 VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQEMKYL 246 V+DA+ +LGRLA+ I A + G V+++ +++ +SG Q+M Y Sbjct: 17 VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAYR 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 + + + P K + + I+GM+P K + G L++LK Y+G P+ Sbjct: 77 HSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLP-KNSLGRQMLSKLKVYKGDQHPH 132
>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13| Length = 174 Score = 42.7 bits (99), Expect = 5e-04 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 14/128 (10%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQEMKY 243 VVVDA LGRLA+++A ++ G VVV+ ++ ++G + ++ Y Sbjct: 42 VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100 Query: 244 LRF--LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 R+ + + T+ + + + P +++ + GM+P K +G A RLK Y G P+ Sbjct: 101 TRYTGYQGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHPH 158 Query: 418 DRTKRMVI 441 K V+ Sbjct: 159 SAQKPQVL 166
>RL13_SYNY3 (P73294) 50S ribosomal protein L13| Length = 151 Score = 41.6 bits (96), Expect = 0.001 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEM 237 K V+DA LGRLA+ VA L G V+++ E+I ++G Q++ Sbjct: 15 KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKL 74 Query: 238 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 R + + + R P +I+ +RGM+P K + G +LK Y G P+ Sbjct: 75 YRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLP-KNSLGRKLFTKLKVYAGPSHPH 133
>RL13_BACSU (P70974) 50S ribosomal protein L13| Length = 145 Score = 41.2 bits (95), Expect = 0.001 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 14/135 (10%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K +VVDA LGRL+S VA L G V+++ E+I + Sbjct: 6 MANASTIERKCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIEL 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRA--PAKILWRTIRGMIPHKTARGEAALAR 384 +G + ++ Y R + K S + R P K+L I+GM+P K + G + Sbjct: 66 TGKKLTDKI-YYRHTQHPGGLK-SRTALEMRTNYPEKMLELAIKGMLP-KGSLGRQMFKK 122 Query: 385 LKAYEGVPPPYDRTK 429 L Y G P++ K Sbjct: 123 LNVYRGSEHPHEAQK 137
>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13| Length = 145 Score = 39.7 bits (91), Expect = 0.004 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+++ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G + +M Y S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKEQDKMYYRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_MYCLE (P38014) 50S ribosomal protein L13| Length = 147 Score = 38.9 bits (89), Expect = 0.007 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 12/117 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 V+DA +LGRLA++ A L G V+V+ +++ +SG V+ +M Y Sbjct: 17 VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYR 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 K + G + + P +++ + I GM+P K +L+ Y G P+ Sbjct: 77 HSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLP-KNKLSRQIQRKLRVYAGPDHPH 132
>RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13| Length = 143 Score = 37.7 bits (86), Expect = 0.015 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 12/121 (9%) Frame = +1 Query: 94 KRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEM 237 K ++DA LGRLAS AK L+ +V++ ++I ++G + Sbjct: 15 KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74 Query: 238 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 Y + T + + R P +IL + ++G++P K G LK Y G P+ Sbjct: 75 YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHPH 133 Query: 418 D 420 + Sbjct: 134 E 134
>RL13_STAES (Q8CRI9) 50S ribosomal protein L13| Length = 145 Score = 37.7 bits (86), Expect = 0.015 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+++ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G + +M + S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKEQDKMYHRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_AQUAE (O67722) 50S ribosomal protein L13| Length = 144 Score = 37.4 bits (85), Expect = 0.020 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLAS +AK L G V+V+ E+I ++G + Q+ Y Sbjct: 17 VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYW 76 Query: 247 ----------RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 396 R L+ + KP +++ ++ M+P K G L +LK Y Sbjct: 77 HSRYPGGLKERTLKWMLENKPE----------EVIRLAVKRMLP-KNRLGHRMLKKLKVY 125 Query: 397 EGVPPPYDRTK 429 G P+ K Sbjct: 126 RGPEHPHQAQK 136
>RL13_STAAW (Q7A089) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAS (Q6G7A3) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAR (Q6GEL7) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAN (Q7A473) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAM (Q99S51) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.026 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_CHLTR (O84127) 50S ribosomal protein L13| Length = 150 Score = 36.6 bits (83), Expect = 0.034 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 13/113 (11%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEM-KY 243 VV+A LGRL+S VAK L G V+V+ E++ ++G Q++ Y Sbjct: 24 VVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83 Query: 244 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 M P I R PA ++ ++GM+P KT G + L+ +G Sbjct: 84 YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134
>RL13_STACA (Q00990) 50S ribosomal protein L13| Length = 145 Score = 36.6 bits (83), Expect = 0.034 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L +G V+++ +I M Sbjct: 6 MANESNIERKWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEM 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + + P ++L +I+GM+P + GE +L Sbjct: 66 TGKKASDKVYYRHSNYPGGIKSITAGELREKNPERLLEISIKGMLP-SSRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_THET8 (P60488) 50S ribosomal protein L13| Length = 140 Score = 36.2 bits (82), Expect = 0.045 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 23/129 (17%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEMKY 243 V++DA LGRLA+ +A L G VVVV ++I ++G + Q++ Y Sbjct: 14 VLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKI-Y 72 Query: 244 LRF-----------LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 R+ L K + T P ++L ++GM+P K G RLK Sbjct: 73 TRYSGYPGGLKKIPLEKMLATHPE----------RVLEHAVKGMLP-KGPLGRRLFKRLK 121 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 122 VYAGPDHPH 130
>RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13| Length = 150 Score = 36.2 bits (82), Expect = 0.045 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 13/113 (11%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEM-KY 243 V++A LGRL+S VAK L G V+V+ E++ ++G Q++ Y Sbjct: 24 VINAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83 Query: 244 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 M P I R PA ++ ++GM+P KT G + L+ +G Sbjct: 84 YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVVKG 134
>RL13_HELPY (P56038) 50S ribosomal protein L13| Length = 141 Score = 35.8 bits (81), Expect = 0.059 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 13/119 (10%) Frame = +1 Query: 100 VVVDARHHMLGRLASIVAKELLNGQR------------VVVVRCEEICMSGGLVRQEMKY 243 VV+DA+ + GRL + +A L R VVV+ ++ SG + ++ +Y Sbjct: 15 VVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSG-MKLEDKEY 73 Query: 244 LRFLRKRMNTKPSH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 417 +TK + +AP K+ +RGM+P KT G+A + +LK Y P+ Sbjct: 74 FTHSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
>RL13_STAHJ (Q4L881) 50S ribosomal protein L13| Length = 145 Score = 35.4 bits (80), Expect = 0.077 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 210 M + S + K V+DA LGRL+S VA L G V+++ +I + Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIEL 65 Query: 211 SGGLVRQEMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 390 +G ++ Y + G + P ++L +I+GM+P + GE +L Sbjct: 66 TGKKESDKIYYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLP-SSRLGEKQGKKLF 124 Query: 391 AYEGVPPPY 417 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13| Length = 149 Score = 35.4 bits (80), Expect = 0.077 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 13/125 (10%) Frame = +1 Query: 67 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICM 210 +V S VVDA LGRL+S VAK L G V+V+ E++ + Sbjct: 11 IVKSSETTKSWYVVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRL 70 Query: 211 SGGLVRQEM-KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARL 387 +G Q++ +Y M P + R P I+ I+GM+P +T G+ L L Sbjct: 71 TGAKKGQKIYRYYTGYISGMREIPFEN-MMARKPNYIIEHAIKGMMP-RTRLGKKQLKSL 128 Query: 388 KAYEG 402 + +G Sbjct: 129 RIVKG 133
>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)| Length = 154 Score = 35.4 bits (80), Expect = 0.077 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 13/125 (10%) Frame = +1 Query: 85 VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 228 V K V++DA ++GRLA++VA L G V+++ ++ ++G Sbjct: 11 VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70 Query: 229 QEMKYLRF-LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGV 405 ++ Y + + + + R P +++ + I MIP + G + L+ Y G Sbjct: 71 NKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIP-RGPLGRVQMGNLRVYPGA 129 Query: 406 PPPYD 420 P++ Sbjct: 130 EHPHE 134
>RL13_TREPA (O83988) 50S ribosomal protein L13| Length = 142 Score = 35.0 bits (79), Expect = 0.10 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 12/118 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEMKYL 246 ++DA LGR+A+ VA L G VVV+ E++ +SG + +M Y Sbjct: 17 LIDAAGRPLGRVAARVACLLRGKHKASYTPNQEMGDYVVVINAEKVFLSGTKPKDKMYYR 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 420 S + R P + L ++GM+P K G + +K Y G P++ Sbjct: 77 HSGYPGGLKSVSFSALVKRRPVEPLRHAVKGMLP-KGPLGRKLIKNVKIYAGSVHPHE 133
>RL13_SHIFL (P0AA15) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_SALTY (P0AA13) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_SALTI (P0AA14) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECOLI (P0AA10) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECOL6 (P0AA11) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECO57 (P0AA12) 50S ribosomal protein L13| Length = 142 Score = 34.3 bits (77), Expect = 0.17 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_HAEIN (P44387) 50S ribosomal protein L13| Length = 142 Score = 33.9 bits (76), Expect = 0.22 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Frame = +1 Query: 103 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQEMKYL 246 VVDA LGRLA+ +A+ L G ++V+ +++ ++G ++ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYW 76 Query: 247 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 402 + + + R P ++ ++GM+P K G A +LK Y G Sbjct: 77 HTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois| homeobox protein 4) Length = 485 Score = 33.5 bits (75), Expect = 0.29 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = +3 Query: 282 PRPHPLPRPGQDPLAHHPRYDSAQDRE----GRGRACQAQGVRGCAAAV 416 P PHPLP G P A P +A++ E R R C C AA+ Sbjct: 279 PHPHPLPGGGPPPRAAEPPAAAAEEEEEEAAERARGCLKPAAEECEAAL 327
>IF2_METCA (Q609C0) Translation initiation factor IF-2| Length = 868 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +3 Query: 279 IPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQ 428 IPRP P PRP P A P+ ++ + R +A+G + A R+D+ Sbjct: 195 IPRPAPEPRPPARPSAGKPKAEAPRAHPAE-RETEARGDKRSAGLSRKDE 243
>CAPU_DROME (Q24120) Protein cappuccino| Length = 1059 Score = 30.0 bits (66), Expect = 3.2 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 3 PPPPPELQTLVAAPPP 50 PPPPP L VA PPP Sbjct: 488 PPPPPPLHAFVAPPPP 503
>RL13_BUCBP (Q89AE6) 50S ribosomal protein L13| Length = 144 Score = 30.0 bits (66), Expect = 3.2 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 12/109 (11%) Frame = +1 Query: 106 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEMKYLR 249 +DA +LGRLA+ +A L G ++V+ + I ++G + Y Sbjct: 20 IDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHH 79 Query: 250 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 396 K + + R P +I+ +RGM+P K G + +LK Y Sbjct: 80 TGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLP-KGPLGRSMFKKLKVY 127
>VGLC_EHV1D (P68325) Glycoprotein C precursor (Glycoprotein 13)| Length = 468 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 239 FISWRTRPPDMQISSQRTTTTRCPLSSSLATIDARRP 129 F+SW + SQ TT CP S L + +RRP Sbjct: 351 FVSWSVNDHLPGVPSQDMTTGVCPSHSGLVNMQSRRP 387
>VGLC_EHV1B (Q6S6Q5) Glycoprotein C precursor (Glycoprotein 13)| Length = 468 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 239 FISWRTRPPDMQISSQRTTTTRCPLSSSLATIDARRP 129 F+SW + SQ TT CP S L + +RRP Sbjct: 351 FVSWSVNDHLPGVPSQDMTTGVCPSHSGLVNMQSRRP 387
>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion| 2 protein) Length = 314 Score = 29.6 bits (65), Expect = 4.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 Query: 3 PPPPPELQTLVAAPPP 50 PPPPP Q+L A+PPP Sbjct: 270 PPPPPLPQSLTASPPP 285
>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 367 Score = 29.3 bits (64), Expect = 5.5 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 3 PPPPPELQTLVAAPPP 50 PPPPP L AAPPP Sbjct: 52 PPPPPPLPLAAAAPPP 67
>VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymerase accessory| protein) (PAP) (ICP36 protein) Length = 433 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -3 Query: 49 GGGAATRVWSSGGGGG 2 GGG+ TR SSGGGGG Sbjct: 345 GGGSGTRKMSSGGGGG 360
>PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 424 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -2 Query: 221 RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTT 102 +PP+ ++S TTTT +SSS + I P+ W +TT Sbjct: 371 KPPETTLNSTTTTTTTTKVSSSTSKIPF-TPAPWANTTTT 409
>VP6_BTVBZ (P23066) VP6 protein (Minor inner core protein VP6)| Length = 329 Score = 28.9 bits (63), Expect = 7.2 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Frame = -1 Query: 474 QAAASEPERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPKDLGRGAEV 295 Q+ + + E G + V RR HT V G +G R + DG K G G + Sbjct: 61 QSESGQKEEGGKETKDADVDRRIHTAVGSGSGTKGSGERANENANRGDG--KVGGGGGDA 118 Query: 294 DGAVGWLGVH-----PLTEE 250 D VG G + LTEE Sbjct: 119 DAGVGATGTNGGRWVVLTEE 138
>PERT_BORPE (P14283) Pertactin precursor (P.93) [Contains: Outer membrane| protein P.69] Length = 910 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 8/75 (10%) Frame = +3 Query: 273 QAIPRPHPLPRPG-QDPLAHHPRYDSAQDREGRGRACQA-------QGVRGCAAAVRQDQ 428 +A P P P P+PG Q P P+ ++ + GR A G G A+ + + Sbjct: 570 KAPPAPKPAPQPGPQPPQPPQPQPEAPAPQPPAGRELSAAANAAVNTGGVGLASTLWYAE 629 Query: 429 AHGHSRRAQVLRLQP 473 ++ S+R LRL P Sbjct: 630 SNALSKRLGELRLNP 644
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +3 Query: 270 HQAIPRPHPLPRPGQDPLAHHPRYDSA 350 H P P P P P Q P HHP A Sbjct: 330 HAPPPAPPPPPAPAQHPHQHHPHLPGA 356
>VP6_BTV17 (P32935) VP6 protein (Minor inner core protein VP6)| Length = 325 Score = 28.9 bits (63), Expect = 7.2 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Frame = -1 Query: 474 QAAASEPERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTAD-GAPKDLGRGAE 298 Q+ + + E G + V RR HT V +GL R N AD G K G G + Sbjct: 57 QSESGQKEEGGKETKDADVDRRIHTAVGSGSSTKGLGERA---NENADRGDGKVGGGGGD 113 Query: 297 VDGAVGWLGVH-----PLTEE 250 D VG G + LTEE Sbjct: 114 ADAGVGATGTNGRRWVVLTEE 134
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.9 bits (63), Expect = 7.2 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = -2 Query: 224 TRPPDMQISSQRTTTTRCPLSSSLATID-ARRPSMWWRASTTTRLAHTPEPDTISPLT 54 T PP S TTTT P + + T PS +TT TP P T +P+T Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = -2 Query: 224 TRPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHTPEPDTISPLT 54 T PP S TT P +S+ PS +TT TP P T +P+T Sbjct: 1492 TTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1548
>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD| protein) Length = 3119 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 273 QAIPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRAC 380 Q P P PLP P ++PL H P+ + + ++ R C Sbjct: 48 QPPPPPPPLPGPAEEPL-HRPKKELSATKKDRVNHC 82
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 270 HQAIPRPHPLPRPGQDPLAHHP 335 HQ +P HP P Q P AHHP Sbjct: 281 HQTLPPHHPYPHQHQHP-AHHP 301
>RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13| Length = 142 Score = 28.5 bits (62), Expect = 9.4 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 12/109 (11%) Frame = +1 Query: 106 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQEMKYLR 249 VDA + +LGR AS ++ L G ++V+ +I ++G ++ Y Sbjct: 18 VDATNKILGRFASAISIRLRGKHKIEYTPHLDTGDYIIVLNASKILVTGQKKINKVYYHH 77 Query: 250 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 396 + I + PAK++ ++GM+P K + G + +LK + Sbjct: 78 TGYIGGIKQLRFEEIMLKNPAKVIEIAVKGMLP-KGSLGRSMFKKLKVF 125
>IF2_RHIME (Q92SW4) Translation initiation factor IF-2| Length = 889 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 13/73 (17%) Frame = +3 Query: 288 PHPLPRPGQDPLAHHPRYD-------------SAQDREGRGRACQAQGVRGCAAAVRQDQ 428 P P RP P H PR + SA + E R RA +R A R+ + Sbjct: 80 PQPSGRPAPQPQPHQPRQEQNRPRGGVVLNDLSAGEMEARRRALAEAQIRDAEEAKRRAE 139 Query: 429 AHGHSRRAQVLRL 467 RR + RL Sbjct: 140 DEVRRRREEEERL 152
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 282 PRPHPLPRPGQDPLAHHP 335 P PHP PRP Q P A P Sbjct: 335 PHPHPHPRPPQPPAAQAP 352
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 270 HQAIPRPHPLPRPGQDPLAHHP 335 HQ +P HP P Q P AHHP Sbjct: 126 HQTLPPHHPYPHQHQHP-AHHP 146
>RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)| Length = 15 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +1 Query: 70 VSGSGVCAKRVVVDA 114 VSGSG+ AKRVVVDA Sbjct: 1 VSGSGIMAKRVVVDA 15 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,244,230 Number of Sequences: 219361 Number of extensions: 1160603 Number of successful extensions: 6180 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 4670 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6013 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
