| Clone Name | bast62a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466941.1| Oryza sativa (japonica cultivar-group), mRNA Length = 579 Score = 141 bits (71), Expect = 2e-30 Identities = 184/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| || | |||||||| ||||| ||||||||||||||| Sbjct: 235 gcggtgatgacgctgaacgacttcgaagccggcggcgacggcggcgacccgtcggagtgc 294 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 ||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||| | Sbjct: 295 gacggcaagttccacaagaacacggagcgcgtggtggcgctgtccacggggtggtacgcc 354 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 ||| |||||| ||| ||| | |||||| |||||||||||| ||||||| ||| Sbjct: 355 aacggcaggcgctgcaacaagaacatccggatcaacgccaacggcaggtccgtgctcgcc 414 Query: 424 -aggtcgtcgacgagtgcgacaccct-cacgggtgcgac 460 |||||||||||||||||||| |||| ||||| |||||| Sbjct: 415 aaggtcgtcgacgagtgcgactccctgcacggctgcgac 453 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 133 ccgagcggctcgctccggccgagccggggccactcgtgccaagactgctgcaaggccggg 192 ||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 124 ccgagcggcacgctccgcccgagcaggagccactcgtgccaggactgctgcaaggccggc 183 Query: 193 caggcgtacccgacgtac 210 | | | |||||||||||| Sbjct: 184 cggtcctacccgacgtac 201
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 2e-30 Identities = 184/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| || | |||||||| ||||| ||||||||||||||| Sbjct: 25558209 gcggtgatgacgctgaacgacttcgaagccggcggcgacggcggcgacccgtcggagtgc 25558268 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 ||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||| | Sbjct: 25558269 gacggcaagttccacaagaacacggagcgcgtggtggcgctgtccacggggtggtacgcc 25558328 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 ||| |||||| ||| ||| | |||||| |||||||||||| ||||||| ||| Sbjct: 25558329 aacggcaggcgctgcaacaagaacatccggatcaacgccaacggcaggtccgtgctcgcc 25558388 Query: 424 -aggtcgtcgacgagtgcgacaccct-cacgggtgcgac 460 |||||||||||||||||||| |||| ||||| |||||| Sbjct: 25558389 aaggtcgtcgacgagtgcgactccctgcacggctgcgac 25558427 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 133 ccgagcggctcgctccggccgagccggggccactcgtgccaagactgctgcaaggccggg 192 ||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 25558098 ccgagcggcacgctccgcccgagcaggagccactcgtgccaggactgctgcaaggccggc 25558157 Query: 193 caggcgtacccgacgtac 210 | | | |||||||||||| Sbjct: 25558158 cggtcctacccgacgtac 25558175
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 141 bits (71), Expect = 2e-30 Identities = 184/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| || | |||||||| ||||| ||||||||||||||| Sbjct: 28256 gcggtgatgacgctgaacgacttcgaagccggcggcgacggcggcgacccgtcggagtgc 28315 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 ||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||| | Sbjct: 28316 gacggcaagttccacaagaacacggagcgcgtggtggcgctgtccacggggtggtacgcc 28375 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 ||| |||||| ||| ||| | |||||| |||||||||||| ||||||| ||| Sbjct: 28376 aacggcaggcgctgcaacaagaacatccggatcaacgccaacggcaggtccgtgctcgcc 28435 Query: 424 -aggtcgtcgacgagtgcgacaccct-cacgggtgcgac 460 |||||||||||||||||||| |||| ||||| |||||| Sbjct: 28436 aaggtcgtcgacgagtgcgactccctgcacggctgcgac 28474 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 133 ccgagcggctcgctccggccgagccggggccactcgtgccaagactgctgcaaggccggg 192 ||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 28145 ccgagcggcacgctccgcccgagcaggagccactcgtgccaggactgctgcaaggccggc 28204 Query: 193 caggcgtacccgacgtac 210 | | | |||||||||||| Sbjct: 28205 cggtcctacccgacgtac 28222
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 141 bits (71), Expect = 2e-30 Identities = 184/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| || | |||||||| ||||| ||||||||||||||| Sbjct: 49608 gcggtgatgacgctgaacgacttcgaagccggcggcgacggcggcgacccgtcggagtgc 49667 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 ||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||| | Sbjct: 49668 gacggcaagttccacaagaacacggagcgcgtggtggcgctgtccacggggtggtacgcc 49727 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 ||| |||||| ||| ||| | |||||| |||||||||||| ||||||| ||| Sbjct: 49728 aacggcaggcgctgcaacaagaacatccggatcaacgccaacggcaggtccgtgctcgcc 49787 Query: 424 -aggtcgtcgacgagtgcgacaccct-cacgggtgcgac 460 |||||||||||||||||||| |||| ||||| |||||| Sbjct: 49788 aaggtcgtcgacgagtgcgactccctgcacggctgcgac 49826 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 133 ccgagcggctcgctccggccgagccggggccactcgtgccaagactgctgcaaggccggg 192 ||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 49497 ccgagcggcacgctccgcccgagcaggagccactcgtgccaggactgctgcaaggccggc 49556 Query: 193 caggcgtacccgacgtac 210 | | | |||||||||||| Sbjct: 49557 cggtcctacccgacgtac 49574
>ref|XM_472110.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 121 bits (61), Expect = 2e-24 Identities = 167/201 (83%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| |||| |||||||| ||||| | ||||||||||||| Sbjct: 208 gcggtgatgacgctgaacgacttcgacgccggcggcgacggcggcggcccgtcggagtgc 267 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 |||| | || |||| |||| | |||| ||||||||||||||||||||||||||| | Sbjct: 268 gacgagatgtaccacagcaacacggagctggtggtggcgctgtccacggggtggtacgcc 327 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 || ||| |||||||||||| | ||| |||||| |||||||||||| ||||||| ||| Sbjct: 328 ggcggcagccgctgcggcaagagcgtccggatcaacgccaacggcaggtccgtgctcgcc 387 Query: 424 -aggtcgtcgacgagtgcgac 443 |||| ||||||||||||||| Sbjct: 388 aaggtggtcgacgagtgcgac 408 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 168 gtgccaagactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccg 225 |||||| ||||||||||||||||| || | ||||||||||||| |||||||||||| Sbjct: 129 gtgccaggactgctgcaaggccggccaatcctacccgacgtacacttgctcgccgccg 186
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 2e-24 Identities = 167/201 (83%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| |||| |||||||| ||||| | ||||||||||||| Sbjct: 17571060 gcggtgatgacgctgaacgacttcgacgccggcggcgacggcggcggcccgtcggagtgc 17571119 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 |||| | || |||| |||| | |||| ||||||||||||||||||||||||||| | Sbjct: 17571120 gacgagatgtaccacagcaacacggagctggtggtggcgctgtccacggggtggtacgcc 17571179 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 || ||| |||||||||||| | ||| |||||| |||||||||||| ||||||| ||| Sbjct: 17571180 ggcggcagccgctgcggcaagagcgtccggatcaacgccaacggcaggtccgtgctcgcc 17571239 Query: 424 -aggtcgtcgacgagtgcgac 443 |||| ||||||||||||||| Sbjct: 17571240 aaggtggtcgacgagtgcgac 17571260 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 168 gtgccaagactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccg 225 |||||| ||||||||||||||||| || | ||||||||||||| |||||||||||| Sbjct: 17570981 gtgccaggactgctgcaaggccggccaatcctacccgacgtacacttgctcgccgccg 17571038 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccgcctcctgctgctcgcg 84 |||||||||||||||||||| Sbjct: 29602621 gccgcctcctgctgctcgcg 29602640 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tcgccgccgccggcgctggc 126 |||||||||||||||||||| Sbjct: 21889202 tcgccgccgccggcgctggc 21889183 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 20153798 gctgctcgccgccgccggcg 20153817
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 121 bits (61), Expect = 2e-24 Identities = 167/201 (83%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 244 gcggtcatgacgctcaacaactttgacgagggcggcgaaggcggggacccgtcggagtgc 303 ||||| |||||||| ||| |||| |||| |||||||| ||||| | ||||||||||||| Sbjct: 51800 gcggtgatgacgctgaacgacttcgacgccggcggcgacggcggcggcccgtcggagtgc 51859 Query: 304 gacggcaagttccaccacaactcagagcgcgtggtggcgctgtccacggggtggtacagc 363 |||| | || |||| |||| | |||| ||||||||||||||||||||||||||| | Sbjct: 51860 gacgagatgtaccacagcaacacggagctggtggtggcgctgtccacggggtggtacgcc 51919 Query: 364 gggggctcccgctgcggcaacaacgtacggatccgagccaacggcaggcccgtgcttgcc 423 || ||| |||||||||||| | ||| |||||| |||||||||||| ||||||| ||| Sbjct: 51920 ggcggcagccgctgcggcaagagcgtccggatcaacgccaacggcaggtccgtgctcgcc 51979 Query: 424 -aggtcgtcgacgagtgcgac 443 |||| ||||||||||||||| Sbjct: 51980 aaggtggtcgacgagtgcgac 52000 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 168 gtgccaagactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccg 225 |||||| ||||||||||||||||| || | ||||||||||||| |||||||||||| Sbjct: 51721 gtgccaggactgctgcaaggccggccaatcctacccgacgtacacttgctcgccgccg 51778
>ref|NM_197116.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0051D19.24), mRNA Length = 642 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 388 gtggtggcgctgtccacggggtggt 412
>gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequence, complete sequence Length = 58734 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 55918 gtggtggcgctgtccacggggtggt 55942
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 129343 gtggtggcgctgtccacggggtggt 129319 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 gactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccggt 227 ||||||||| ||| ||| ||||||||||| |||| |||||||||||||||| Sbjct: 106841 gactgctgcgaggacggcaaggcgtacccgcagtaccggtgctcgccgccggt 106893 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 caggtgctcgccgccggtctcctc 233 |||||||||||||||||| ||||| Sbjct: 96603 caggtgctcgccgccggtgtcctc 96626
>gb|AC092211.7| Oryza sativa chromosome 10 P0031G09 genomic sequence, complete sequence Length = 17072 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 gactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccggt 227 ||||||||| ||| ||| ||||||||||| |||| |||||||||||||||| Sbjct: 13059 gactgctgcgaggacggcaaggcgtacccgcagtaccggtgctcgccgccggt 13111 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 |||||||||||||| |||||||||| Sbjct: 13219 gtggtggcgctgtcgacggggtggt 13243
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 175 gactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccggt 227 ||||||||| ||| ||| ||||||||||| |||| |||||||||||||||| Sbjct: 18106287 gactgctgcgaggacggcaaggcgtacccgcagtaccggtgctcgccgccggt 18106235 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 18083785 gtggtggcgctgtccacggggtggt 18083809 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 caggtgctcgccgccggtctcctc 233 |||||||||||||||||| ||||| Sbjct: 18116525 caggtgctcgccgccggtgtcctc 18116502 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 16666253 cctgctgctcgccgccgccg 16666234
>dbj|AK102387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092D15, full insert sequence Length = 831 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 410 gtggtggcgctgtccacggggtggt 434
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 175 gactgctgcaaggccgggcaggcgtacccgacgtacaggtgctcgccgccggt 227 ||||||||| ||| ||| ||||||||||| |||| |||||||||||||||| Sbjct: 18115540 gactgctgcgaggacggcaaggcgtacccgcagtaccggtgctcgccgccggt 18115488 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 ||||||||||||||||||||||||| Sbjct: 18093038 gtggtggcgctgtccacggggtggt 18093062 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 caggtgctcgccgccggtctcctc 233 |||||||||||||||||| ||||| Sbjct: 18125778 caggtgctcgccgccggtgtcctc 18125755 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 16675293 cctgctgctcgccgccgccg 16675274
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 213 gtgctcgccgccggtctcctcct 235 ||||||||||||||||||||||| Sbjct: 1080409 gtgctcgccgccggtctcctcct 1080387
>gb|AE012330.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 238 of 460 of the complete genome Length = 12695 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 tcctgctgctcgcgctggcggcg 93 ||||||||||||||||||||||| Sbjct: 5023 tcctgctgctcgcgctggcggcg 5045
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 tcctgctgctcgcgctggcggcg 93 ||||||||||||||||||||||| Sbjct: 2289219 tcctgctgctcgcgctggcggcg 2289197
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 gcctcctgctgctcgcgctggcg 90 ||||||||||||||||||||||| Sbjct: 6640430 gcctcctgctgctcgcgctggcg 6640408 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 6441507 cctgctgctcgccgccgccg 6441488 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 3304499 gctgctcgccgccgccggcg 3304518
>ref|NM_001006617.1| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 1, mRNA Length = 3395 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>ref|NM_001006619.1| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 3, mRNA Length = 3254 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>ref|NM_024117.3| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 2, mRNA Length = 3287 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>ref|NM_001006621.1| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 5, mRNA Length = 2977 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>ref|NM_001006620.1| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 4, mRNA Length = 3067 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>ref|NM_001006618.1| Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 6, mRNA Length = 1593 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 88 cctgctgctcgccgccgccggc 67
>gb|AY524432.1| Homo sapiens SAPK-interacting protein 1 gamma isoform mRNA, complete cds, alternatively spliced Length = 3252 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 85 cctgctgctcgccgccgccggc 64
>gb|AY524431.1| Homo sapiens SAPK-interacting protein 1 beta isoform mRNA, complete cds, alternatively spliced Length = 3285 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 85 cctgctgctcgccgccgccggc 64
>gb|AY524430.1| Homo sapiens SAPK-interacting protein 1 alpha isoform mRNA, complete cds, alternatively spliced Length = 1590 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 85 cctgctgctcgccgccgccggc 64
>gb|AY524429.1| Homo sapiens SAPK-interacting protein 1 mRNA, complete cds, alternatively spliced Length = 3393 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 85 cctgctgctcgccgccgccggc 64
>gb|BC003044.1| Homo sapiens mitogen-activated protein kinase associated protein 1, mRNA (cDNA clone MGC:4372 IMAGE:2823015), complete cds Length = 2196 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 57 cctgctgctcgccgccgccggc 36
>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the 5' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, the 5' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3 and three CpG islands, complete sequence Length = 109081 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 25561 cctgctgctcgccgccgccggc 25582
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 acctgctgctcgccgccgccgg 119 |||||||||||||||||||||| Sbjct: 26235 acctgctgctcgccgccgccgg 26214
>emb|CR857789.1| Pongo pygmaeus mRNA; cDNA DKFZp459H0354 (from clone DKFZp459H0354) Length = 3405 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 58 cctgctgctcgccgccgccggc 37
>gb|AY633626.1| Homo sapiens mitogen-activated protein kinase 2-associated protein 1r mRNA, complete cds Length = 2413 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 62 cctgctgctcgccgccgccggc 41
>gb|AY633625.1| Homo sapiens mitogen-activated protein kinase 2-associated protein 1b mRNA, complete cds Length = 2290 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 62 cctgctgctcgccgccgccggc 41
>gb|AY633624.1| Homo sapiens mitogen-activated protein kinase 2-associated protein 1a mRNA, complete cds Length = 2175 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 55 cctgctgctcgccgccgccggc 34
>emb|AL833042.1|HSM804353 Homo sapiens mRNA; cDNA DKFZp666C019 (from clone DKFZp666C019) Length = 3040 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 49 cctgctgctcgccgccgccggc 28
>ref|XM_943332.1| PREDICTED: Homo sapiens hypothetical protein LOC648460 (LOC648460), mRNA Length = 459 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 333 cctgctgctcgccgccgccggc 354
>ref|XM_933243.1| PREDICTED: Homo sapiens hypothetical protein LOC645889 (LOC645889), mRNA Length = 459 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 333 cctgctgctcgccgccgccggc 354
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccacctgctgctcgccgccgccggcg 121 ||||||||||||||||| |||||||| Sbjct: 563140 ccacctgctgctcgccgacgccggcg 563115 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccg 118 |||||||||||||||||||||| Sbjct: 452121 cacctgctgctcgccgccgccg 452100 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccggcgc 122 ||||||||||| |||||||||||| Sbjct: 3843701 cctgctgctcggcgccgccggcgc 3843724 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctcgcgctggcggcgagcc 97 |||||||||||||||||||| Sbjct: 30205 gctcgcgctggcggcgagcc 30224
>gb|BC002326.2| Homo sapiens mitogen-activated protein kinase associated protein 1, transcript variant 2, mRNA (cDNA clone MGC:2745 IMAGE:2823015), complete cds Length = 2196 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccggc 120 |||||||||||||||||||||| Sbjct: 57 cctgctgctcgccgccgccggc 36
>ref|NM_197114.1| Oryza sativa (japonica cultivar-group) hypothetical protein (P0031G09.2), mRNA Length = 831 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 gtggtggcgctgtccacggggtggt 358 |||||||||||||| |||||||||| Sbjct: 247 gtggtggcgctgtcgacggggtggt 271
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acctgctgctcgccgccgccg 118 ||||||||||||||||||||| Sbjct: 158527 acctgctgctcgccgccgccg 158547
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcgc 122 ||||||||||||||||||||| Sbjct: 395186 gctgctcgccgccgccggcgc 395166
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tgctgctcgccgccgccggcg 121 ||||||||||||||||||||| Sbjct: 155547 tgctgctcgccgccgccggcg 155527
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 gccaggtcgtcgacgagtgcg 441 ||||||||||||||||||||| Sbjct: 2103895 gccaggtcgtcgacgagtgcg 2103875
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tgctgctcgccgccgccggcg 121 ||||||||||||||||||||| Sbjct: 38703 tgctgctcgccgccgccggcg 38683
>gb|AC121976.2| Mus musculus BAC clone RP24-286N17 from 8, complete sequence Length = 161146 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttcacagagatgctgaggtcc 60 ||||||||||||||||||||| Sbjct: 40543 ttcacagagatgctgaggtcc 40563
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 agccacctgctgctcgccgccgccggcgc 122 ||||| ||||||||||||||||| ||||| Sbjct: 161363 agccagctgctgctcgccgccgcgggcgc 161391
>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete sequence Length = 193444 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcgc 122 ||||||||||||||||||||| Sbjct: 12342 gctgctcgccgccgccggcgc 12322
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ctgctgctcgccgccgccggc 120 ||||||||||||||||||||| Sbjct: 51329 ctgctgctcgccgccgccggc 51309
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acctgctgctcgccgccgccg 118 ||||||||||||||||||||| Sbjct: 1013762 acctgctgctcgccgccgccg 1013782
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcgc 122 ||||||||||||||||||||| Sbjct: 53219 gctgctcgccgccgccggcgc 53199
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcgc 122 ||||||||||||||||||||| Sbjct: 53156 gctgctcgccgccgccggcgc 53136
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 cgagggcggcgaaggcgggga 290 ||||||||||||||||||||| Sbjct: 140507 cgagggcggcgaaggcgggga 140487
>ref|NM_205496.1| Gallus gallus golgi apparatus protein 1 (GLG1), mRNA Length = 3546 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 cctcctgctgctcgcgctggcggcg 93 |||||||||||| |||||||||||| Sbjct: 53 cctcctgctgctggcgctggcggcg 77
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ctgctgctcgcgctggcggcg 93 ||||||||||||||||||||| Sbjct: 93909 ctgctgctcgcgctggcggcg 93889
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccgg 119 ||||||||||||||||||||| Sbjct: 1057674 cctgctgctcgccgccgccgg 1057654 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 4788871 cctgctgctcgccgccgccg 4788890 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 4156459 cctgctgctcgccgccgccg 4156478
>gb|U48395.1|GGU48395 Gallus gallus mutant cysteine-rich FGF receptor mRNA, complete cds Length = 3440 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 cctcctgctgctcgcgctggcggcg 93 |||||||||||| |||||||||||| Sbjct: 53 cctcctgctgctggcgctggcggcg 77
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tgctgctcgccgccgccggcg 121 ||||||||||||||||||||| Sbjct: 25548656 tgctgctcgccgccgccggcg 25548636 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 agccacctgctgctcgccgccgccggcgc 122 ||||| ||||||||||||||||| ||||| Sbjct: 21637844 agccagctgctgctcgccgccgcgggcgc 21637872 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 7115892 cctgctgctcgccgccgccg 7115911
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcgccgccggtctcctcctcc 237 ||||||||||||||||||||| Sbjct: 10816550 tcgccgccggtctcctcctcc 10816530 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 39947347 gctgctcgccgccgccggcg 39947366
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcgccgccggtctcctcctcc 237 ||||||||||||||||||||| Sbjct: 3566 tcgccgccggtctcctcctcc 3546
>dbj|AK058631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C10, full insert sequence Length = 1357 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 agccacctgctgctcgccgccgccggcgc 122 ||||| ||||||||||||||||| ||||| Sbjct: 462 agccagctgctgctcgccgccgcgggcgc 490
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcgc 122 ||||||||||||||||||||| Sbjct: 1740668 gctgctcgccgccgccggcgc 1740688 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 ccaccggccgcctcctgctgctcgcgctggcg 90 |||||||| ||| ||||||| ||||||||||| Sbjct: 3607338 ccaccggcggccgcctgctgttcgcgctggcg 3607369 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 370570 gctgctcgccgccgccggcg 370551
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tgctgctcgccgccgccggcg 121 ||||||||||||||||||||| Sbjct: 25867326 tgctgctcgccgccgccggcg 25867306 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 agccacctgctgctcgccgccgccggcgc 122 ||||| ||||||||||||||||| ||||| Sbjct: 21948043 agccagctgctgctcgccgccgcgggcgc 21948071 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 7181863 cctgctgctcgccgccgccg 7181882
>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete sequence Length = 221647 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ttcacagagatgctgaggtcc 60 ||||||||||||||||||||| Sbjct: 73993 ttcacagagatgctgaggtcc 73973
>gb|M95766.1|CHKFGFR Chicken cysteine-rich fibroblast growth factor receptor (CFR) mRNA, complete cds Length = 3546 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 cctcctgctgctcgcgctggcggcg 93 |||||||||||| |||||||||||| Sbjct: 53 cctcctgctgctggcgctggcggcg 77
>ref|NM_197122.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0051D19.14), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 caggtgctcgccgccggtctcctc 233 |||||||||||||||||| ||||| Sbjct: 261 caggtgctcgccgccggtgtcctc 284
>ref|NM_196916.1| Oryza sativa (japonica cultivar-group) putative amylase (OSJNBa0006L06.1), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 445 cctgctgctcgccgccgccg 426
>ref|XM_526816.1| PREDICTED: Pan troglodytes similar to KIAA1909 protein (LOC471435), mRNA Length = 4359 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggccgcctcctgctgctcg 82 |||||||||||||||||||| Sbjct: 120 cggccgcctcctgctgctcg 101
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgctcgccgccgccggcgc 122 |||||||||||||||||||| Sbjct: 1434905 ctgctcgccgccgccggcgc 1434886
>ref|XM_477858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2498 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccggcgctg 124 |||||||||||||||| ||||| ||||| Sbjct: 446 cacctgctgctcgccgacgccgtcgctg 419
>ref|XM_472608.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tcgccgccgccggcgctggc 126 |||||||||||||||||||| Sbjct: 829 tcgccgccgccggcgctggc 848
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 gcgacggcaagttccaccac 321 |||||||||||||||||||| Sbjct: 2169744 gcgacggcaagttccaccac 2169725
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 66663 cctgctgctcgccgccgccg 66644
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 29112 cctgctgctcgccgccgccg 29131
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cggccgcctcctgctgctcgcgct 86 |||||||||||| ||||||||||| Sbjct: 1272790 cggccgcctcctcctgctcgcgct 1272813
>ref|XM_369398.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06066.4) partial mRNA Length = 3126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cgccgccggtctcctcctcc 237 |||||||||||||||||||| Sbjct: 154 cgccgccggtctcctcctcc 135
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cacctgctgctcgccgccgc 116 |||||||||||||||||||| Sbjct: 2019138 cacctgctgctcgccgccgc 2019157
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccgcctcctgctgctcgcg 84 |||||||||||||||||||| Sbjct: 76794 gccgcctcctgctgctcgcg 76813
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cggccgcctcctgctgctcgcgct 86 |||||||||||| ||||||||||| Sbjct: 2182353 cggccgcctcctcctgctcgcgct 2182330
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ccacctgctgctcgccgccg 115 |||||||||||||||||||| Sbjct: 5723918 ccacctgctgctcgccgccg 5723937
>ref|XM_848126.1| PREDICTED: Canis familiaris similar to S100 calcium binding protein, zeta (LOC610592), mRNA Length = 966 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cgggggctcccgctgcggca 382 |||||||||||||||||||| Sbjct: 696 cgggggctcccgctgcggca 677
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgaaggcggggacccgtcgg 298 |||||||||||||||||||| Sbjct: 181879 cgaaggcggggacccgtcgg 181860
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tgctcgcgctggcggcgagccacc 100 ||||||||| |||||||||||||| Sbjct: 2908355 tgctcgcgcaggcggcgagccacc 2908332 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 1028499 cctgctgctcgccgccgccg 1028518
>emb|Z79692.1|RMEXPGNS R.meliloti exp gene cluster Length = 31638 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgacgagggcggcgaaggcg 286 |||||||||||||||||||| Sbjct: 7628 tgacgagggcggcgaaggcg 7609
>emb|Y11548.1|SPSNBCDE S.pristinaespiralis snbC gene & snbDE gene Length = 22449 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 gctcgccgccgccggcgctggctgcgag 132 |||||||||||||||||| ||| ||||| Sbjct: 4746 gctcgccgccgccggcgccggccgcgag 4773
>emb|X98690.1|SPSNBCGEN S.pristinaespiralis snbC and snbDE genes Length = 22449 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 gctcgccgccgccggcgctggctgcgag 132 |||||||||||||||||| ||| ||||| Sbjct: 4746 gctcgccgccgccggcgccggccgcgag 4773
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cggccgcctcctgctgctcgcgct 86 |||||||||||| ||||||||||| Sbjct: 2192372 cggccgcctcctcctgctcgcgct 2192395
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgctcgccgccggtctcctc 233 |||||||||||||||||||| Sbjct: 135743 tgctcgccgccggtctcctc 135762
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 caccggccgcctcctgctgctcgc 83 |||||||||||| ||||||||||| Sbjct: 152957 caccggccgcctgctgctgctcgc 152980
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccgcctcctgctgctcgcg 84 |||||||||||||||||||| Sbjct: 105310 gccgcctcctgctgctcgcg 105329
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgacgagggcggcgaaggcg 286 |||||||||||||||||||| Sbjct: 974623 tgacgagggcggcgaaggcg 974604
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 10770 cctgctgctcgccgccgccg 10751
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tcctgctgctcgcgctggcg 90 |||||||||||||||||||| Sbjct: 1965555 tcctgctgctcgcgctggcg 1965536
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccacctgctgctcgccgccg 115 |||||||||||||||||||| Sbjct: 107253 ccacctgctgctcgccgccg 107234
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ctcgccgccgccggcgctgg 125 |||||||||||||||||||| Sbjct: 879097 ctcgccgccgccggcgctgg 879078
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 18402306 gctgctcgccgccgccggcg 18402287
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccggcgctg 124 |||||||||||||||| ||||| ||||| Sbjct: 14862907 cacctgctgctcgccgacgccgtcgctg 14862880
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccgcctcctgctgctcgcg 84 |||||||||||||||||||| Sbjct: 28441870 gccgcctcctgctgctcgcg 28441889
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ccacctgctgctcgccgccg 115 |||||||||||||||||||| Sbjct: 5723131 ccacctgctgctcgccgccg 5723150
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tcgccgccgccggcgctggc 126 |||||||||||||||||||| Sbjct: 73803 tcgccgccgccggcgctggc 73784
>gb|AC010443.8| Homo sapiens chromosome 5 clone CTD-2231H16, complete sequence Length = 59396 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggccgcctcctgctgctcg 82 |||||||||||||||||||| Sbjct: 11578 cggccgcctcctgctgctcg 11597
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 38798 gctgctcgccgccgccggcg 38817
>gb|AE004832.1| Pseudomonas aeruginosa PAO1, section 393 of 529 of the complete genome Length = 10505 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ctgctgctcgcgctggcggc 92 |||||||||||||||||||| Sbjct: 7606 ctgctgctcgcgctggcggc 7625
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 128055 gctgctcgccgccgccggcg 128074
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgtacaggtgctcgccgccg 225 |||||||||||||||||||| Sbjct: 588051 cgtacaggtgctcgccgccg 588032
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccggcgctg 124 |||||||||||||||| ||||| ||||| Sbjct: 3077 cacctgctgctcgccgacgccgtcgctg 3050
>dbj|AP005447.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0035G02 Length = 159802 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccggcgctg 124 |||||||||||||||| ||||| ||||| Sbjct: 102512 cacctgctgctcgccgacgccgtcgctg 102485
>dbj|AK111138.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-D11, full insert sequence Length = 560 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccacctgctgctcgccgccg 115 |||||||||||||||||||| Sbjct: 277 ccacctgctgctcgccgccg 258
>dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D03, full insert sequence Length = 2846 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tcgccgccgccggcgctggc 126 |||||||||||||||||||| Sbjct: 926 tcgccgccgccggcgctggc 945
>dbj|AK100802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K14, full insert sequence Length = 2509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 2021 cctgctgctcgccgccgccg 2002
>dbj|AK068559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152M20, full insert sequence Length = 2498 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 97 cacctgctgctcgccgccgccggcgctg 124 |||||||||||||||| ||||| ||||| Sbjct: 445 cacctgctgctcgccgacgccgtcgctg 418
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctgctgctcgccgccgccggcgc 122 ||||||||||||||||||| |||| Sbjct: 593250 cctgctgctcgccgccgcctgcgc 593273
>dbj|AK067249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098M02, full insert sequence Length = 2168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 461 cctgctgctcgccgccgccg 442
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cggccgcctcctgctgctcgcgct 86 |||||||||||| ||||||||||| Sbjct: 2837933 cggccgcctcctcctgctcgcgct 2837956
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctgctgctcgccgccgccg 118 |||||||||||||||||||| Sbjct: 2046199 cctgctgctcgccgccgccg 2046180
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 18328532 gctgctcgccgccgccggcg 18328513
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gctgctcgccgccgccggcg 121 |||||||||||||||||||| Sbjct: 54205 gctgctcgccgccgccggcg 54186
>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete sequence Length = 214210 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggccatcaaaacttcacaga 47 |||||||||||||||||||| Sbjct: 48291 ggccatcaaaacttcacaga 48272
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 cttcacagagatgctgaggtccac 62 ||||||||||| |||||||||||| Sbjct: 104631 cttcacagagaggctgaggtccac 104654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,577,662 Number of Sequences: 3902068 Number of extensions: 3577662 Number of successful extensions: 88882 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81702 Number of HSP's gapped (non-prelim): 7170 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)