ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61h08 |
|---|---|
| Clone Library Name | barley_pub |
>ACM1_RAT (P08482) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.8 bits (68), Expect = 1.3 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET +R RE A ++G+ + G+ +++S+E+ A P++ G CCRCC Sbjct: 214 ETENRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPESPPGRCCRCC 263
>ACM1_MOUSE (P12657) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.8 bits (68), Expect = 1.3 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET +R RE A ++G+ + G+ +++S+E+ A P++ G CCRCC Sbjct: 214 ETENRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPESPPGRCCRCC 263
>ACM1_PONPY (Q5R949) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET SR RE A ++G+ + G+ +++S+E+ A P G CCRCC Sbjct: 214 ETESRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPGTPPGRCCRCC 263
>ACM1_PIG (P04761) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.4 bits (67), Expect = 1.7 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET +R RE A ++G+ + G+ +++S+E+ A P+ G CCRCC Sbjct: 214 ETENRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPETPPGRCCRCC 263
>ACM1_MACMU (P56489) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.4 bits (67), Expect = 1.7 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET +R RE A ++G+ + G+ +++S+E+ A P+ G CCRCC Sbjct: 214 ETENRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPETPPGRCCRCC 263
>ACM1_HUMAN (P11229) Muscarinic acetylcholine receptor M1| Length = 460 Score = 30.4 bits (67), Expect = 1.7 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -1 Query: 409 ETASR-REEAMVKGAASGTLSGRASAAATSTEKVSLSAS-KPKASIGSCCRCC 257 ET +R RE A ++G+ + G+ +++S+E+ A P+ G CCRCC Sbjct: 214 ETENRARELAALQGSET---PGKGGGSSSSSERSQPGAEGSPETPPGRCCRCC 263
>DEOC_SALTY (Q8ZJV8) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET +EEA+++ A+ ++ A TST KV ++A+ A I Sbjct: 140 IETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPESARI 184
>DEOC_SALTI (Q8Z0U3) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET +EEA+++ A+ ++ A TST KV ++A+ A I Sbjct: 140 IETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPESARI 184
>DEOC_SHIFL (Q83P02) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET ++EA+++ A+ ++ A TST KV+++A+ A I Sbjct: 140 IETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARI 184
>DEOC_ECOLI (P0A6L0) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET ++EA+++ A+ ++ A TST KV+++A+ A I Sbjct: 140 IETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARI 184
>DEOC_ECOL6 (P0A6L1) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET ++EA+++ A+ ++ A TST KV+++A+ A I Sbjct: 140 IETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARI 184
>DEOC_ECO57 (Q8XB36) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSASKPKASI 278 +ET ++EA+++ A+ ++ A TST KV+++A+ A I Sbjct: 140 IETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARI 184
>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog| Length = 572 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 373 GAASGTLSGRASAAATSTEKVSLSASKPKASIGSCCRCC 257 GAA+GT+ G S +A + AS SCC CC Sbjct: 135 GAAAGTVGGPGSRSAVGAGGTGTGGA---ASCCSCCCCC 170
>DEOC_VIBVU (Q8DBT2) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 258 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSAS 296 +ET +EEA++K A+ + A TST KV ++A+ Sbjct: 138 IETGELKEEALIKKASQICIEAGADFIKTSTGKVPVNAT 176
>DEOC_VIBPA (Q87M22) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 258 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSAS 296 +ET +EEA++K A+ + A TST KV ++A+ Sbjct: 138 IETGELKEEALIKKASQICIEAGADFIKTSTGKVPVNAT 176
>DEOC2_VIBVY (Q7MI38) Deoxyribose-phosphate aldolase 2 (EC 4.1.2.4)| (Phosphodeoxyriboaldolase 2) (Deoxyriboaldolase 2) (DERA 2) Length = 258 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -1 Query: 412 LETASRREEAMVKGAASGTLSGRASAAATSTEKVSLSAS 296 +ET +EEA++K A+ + A TST KV ++A+ Sbjct: 138 IETGELKEEALIKKASQICIEAGADFIKTSTGKVPVNAT 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,161,403 Number of Sequences: 219361 Number of extensions: 265511 Number of successful extensions: 1309 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1307 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
