| Clone Name | bast61h03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR726539.1|CNS0GNJL Tetraodon nigroviridis full-length cDNA Length = 1869 Score = 40.1 bits (20), Expect = 1.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 ctccgcatttcgttgcctgcttggttca 46 |||||||||||||||||| | ||||||| Sbjct: 1346 ctccgcatttcgttgccttcgtggttca 1373
>gb|AY951749.1| Hypoxylon polyporus voucher YMJ 84 beta-tubulin gene, partial sequence Length = 1520 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ggcgaacgacgtcgaggacg 106 |||||||||||||||||||| Sbjct: 775 ggcgaacgacgtcgaggacg 756
>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete sequence Length = 250586 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 catgtgtcattaggcccag 63 ||||||||||||||||||| Sbjct: 174836 catgtgtcattaggcccag 174818
>emb|AL645611.9| Mouse DNA sequence from clone RP23-432O24 on chromosome 11 Contains part of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, complete sequence Length = 69492 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 cccaggtttcatgggggag 77 ||||||||||||||||||| Sbjct: 18807 cccaggtttcatgggggag 18789
>emb|AL663047.15| Mouse DNA sequence from clone RP23-146J17 on chromosome 1 Contains the gene for a dynein cytoplasmic light polypeptide 1 (DNCL1) pseudogene, the gene for a ribosomal protein L18 (RPL18) pseudogene and the Ctla4 gene for cytotoxic T-lymphocyte-associated protein 4, complete sequence Length = 77653 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 catgtgtcattaggcccag 63 ||||||||||||||||||| Sbjct: 55763 catgtgtcattaggcccag 55781
>gb|AC160760.4| Mus musculus BAC clone RP23-449G13 from chromosome 17, complete sequence Length = 174449 Score = 38.2 bits (19), Expect = 4.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 59 cccaggtttcatgggggagcacc 81 ||||||||| ||||||||||||| Sbjct: 114674 cccaggtttgatgggggagcacc 114652
>gb|AC151289.3| Mus musculus BAC clone RP23-364K1 from chromosome 17, complete sequence Length = 172662 Score = 38.2 bits (19), Expect = 4.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 59 cccaggtttcatgggggagcacc 81 ||||||||| ||||||||||||| Sbjct: 131563 cccaggtttgatgggggagcacc 131585
>emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chromosome 1, complete sequence Length = 162143 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 catgtgtcattaggcccag 63 ||||||||||||||||||| Sbjct: 93152 catgtgtcattaggcccag 93170 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 480,716 Number of Sequences: 3902068 Number of extensions: 480716 Number of successful extensions: 29572 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29562 Number of HSP's gapped (non-prelim): 10 length of query: 108 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 87 effective length of database: 17,151,101,840 effective search space: 1492145860080 effective search space used: 1492145860080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)