| Clone Name | bast61h01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | BAB1_DROME (Q9W0K7) Protein bric-a-brac 1 | 28 | 5.8 | 2 | TRPA_SYNPX (Q7TTU8) Tryptophan synthase alpha chain (EC 4.2.1.20) | 28 | 7.5 |
|---|
>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1| Length = 977 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 Query: 157 PHSDPAAEGRTSQAMAATHHPASPTG 234 PH + SQ + HHPASP G Sbjct: 403 PHHHASPAPHPSQTAGSAHHPASPAG 428
>TRPA_SYNPX (Q7TTU8) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 269 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 154 VPHSDPAAEGRTSQAMAATHHPASPTGGK 240 +P+SDP A+G QA AA A T GK Sbjct: 57 MPYSDPLADGPVIQAAAARALAAGTTPGK 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.122 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,719,152 Number of Sequences: 219361 Number of extensions: 342735 Number of successful extensions: 797 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 787 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 797 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)