ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61h01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 gaccagccaggcgatggcggcga 208 ||||||||||||||||||||||| Sbjct: 264817 gaccagccaggcgatggcggcga 264839
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 gaccagccaggcgatggcggcga 208 ||||||||||||||||||||||| Sbjct: 55856 gaccagccaggcgatggcggcga 55878
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 gaccagccaggcgatggcggcga 208 ||||||||||||||||||||||| Sbjct: 118311 gaccagccaggcgatggcggcga 118333
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcgatcc 310 ||||||||||||||||||||||| Sbjct: 150165 agcggcggcggtggcggcgatcc 150187
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcgatcc 310 ||||||||||||||||||||||| Sbjct: 198969 agcggcggcggtggcggcgatcc 198991
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 291 ggcggcggtggcggcgatccagcccag 317 |||||||| |||||||||||||||||| Sbjct: 2315457 ggcggcggcggcggcgatccagcccag 2315431
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcgatcc 310 ||||||||||||||||||||||| Sbjct: 183757 agcggcggcggtggcggcgatcc 183779
>ref|XM_450390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 204 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 caagcggcggcggtggcggcga 307 |||||||||||||||||||||| Sbjct: 101 caagcggcggcggtggcggcga 122
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 44.1 bits (22), Expect = 0.27 Identities = 46/54 (85%) Strand = Plus / Plus Query: 263 cgccggtgcgcctggcggcgtcacaagcggcggcggtggcggcgatccagccca 316 |||||||||| || |||||| | || |||||| ||| |||||||||||| |||| Sbjct: 71 cgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 124
>ref|XM_506242.1| PREDICTED Oryza sativa (japonica cultivar-group), P0021G06.107 mRNA Length = 1123 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 1 cagtccagtccagtccagcgca 22
>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17, complete sequence Length = 198387 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 104125 cagtccagtccagtccagcgca 104146
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 caagcggcggcggtggcggcga 307 |||||||||||||||||||||| Sbjct: 5118037 caagcggcggcggtggcggcga 5118058 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 15808313 gcggcggcggtggcgccgatgcagccgagctc 15808282 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 13112447 agcggcggcggtggcggcga 13112466
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 8320052 cagtccagtccagtccagcgca 8320073 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 29108445 gcggcggcggtggcgccgatgcagccgagctc 29108414 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccggcggcaagccctcctcc 249 |||||||||||||||||||| Sbjct: 27589272 ccggcggcaagccctcctcc 27589253 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 27524157 gcggcggcggtggcggcgat 27524176
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.27 Identities = 46/54 (85%) Strand = Plus / Minus Query: 263 cgccggtgcgcctggcggcgtcacaagcggcggcggtggcggcgatccagccca 316 |||||||||| || |||||| | || |||||| ||| |||||||||||| |||| Sbjct: 33194673 cgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 33194620 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 tcacaagcggcggcggtggcggcga 307 |||| |||||||||||||||||||| Sbjct: 42282587 tcaccagcggcggcggtggcggcga 42282563 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 40196873 agcggcggcggtggcggcga 40196892 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 27748431 gcggcggcggtggcggcgat 27748450 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 3287779 gcggcggcggtggcggcgat 3287798
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 44.1 bits (22), Expect = 0.27 Identities = 46/54 (85%) Strand = Plus / Minus Query: 263 cgccggtgcgcctggcggcgtcacaagcggcggcggtggcggcgatccagccca 316 |||||||||| || |||||| | || |||||| ||| |||||||||||| |||| Sbjct: 131583 cgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 131530
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 25150 cagtccagtccagtccagcgca 25171
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 caagcggcggcggtggcggcga 307 |||||||||||||||||||||| Sbjct: 120154 caagcggcggcggtggcggcga 120175
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 115164 cagtccagtccagtccagcgca 115185
>dbj|AB106701.1| Heterocapsa triquetra GapC2 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds Length = 922 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 cctcctcatcagtccagtccag 36 |||||||||||||||||||||| Sbjct: 827 cctcctcatcagtccagtccag 806
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 44.1 bits (22), Expect = 0.27 Identities = 46/54 (85%) Strand = Plus / Plus Query: 263 cgccggtgcgcctggcggcgtcacaagcggcggcggtggcggcgatccagccca 316 |||||||||| || |||||| | || |||||| ||| |||||||||||| |||| Sbjct: 321 cgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 374
>dbj|AK059902.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G08, full insert sequence Length = 1123 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 1 cagtccagtccagtccagcgca 22
>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17, complete sequence Length = 232846 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 cagtccagtccagtccagcgca 45 |||||||||||||||||||||| Sbjct: 98702 cagtccagtccagtccagcgca 98681
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatc 309 ||||||||||||||||||||| Sbjct: 2784897 gcggcggcggtggcggcgatc 2784877
>ref|XM_466364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1312 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatcc 310 ||||||||||||||||||||| Sbjct: 338 cggcggcggtggcggcgatcc 358
>ref|XM_966336.1| PREDICTED: Tribolium castaneum similar to Mothers against decapentaplegic homolog 4 (SMAD 4) (Mothers against DPP homolog 4) (Smad4) (LOC660074), mRNA Length = 1593 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ggcggcgtcacaagcggcggcggtggcgg 304 ||||||| |||| |||||||||||||||| Sbjct: 1305 ggcggcggcacaggcggcggcggtggcgg 1333
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 caagcggcggcggtggcggcg 306 ||||||||||||||||||||| Sbjct: 29416 caagcggcggcggtggcggcg 29396
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 caagcggcggcggtggcggcg 306 ||||||||||||||||||||| Sbjct: 114043 caagcggcggcggtggcggcg 114023
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 gaccggcggcaagccctcctc 248 ||||||||||||||||||||| Sbjct: 3847878 gaccggcggcaagccctcctc 3847898
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 253 tcgcccccgtcgccggtgcgcctggcggcgtca 285 |||||| || |||||||||||||| |||||||| Sbjct: 2841965 tcgcccgcggcgccggtgcgcctgacggcgtca 2841997
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatcc 310 ||||||||||||||||||||| Sbjct: 21937098 cggcggcggtggcggcgatcc 21937118 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 31779828 gcggcggcggtggcggcgat 31779847 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 18448675 gcggcggcggtggcggcgat 18448694 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 16922988 agcggcggcggtggcggcga 16923007 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 10713354 gcggcggcggtggcggcgat 10713335
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 tcacaagcggcggcggtggcggcga 307 |||| |||||||||||||||||||| Sbjct: 54544 tcaccagcggcggcggtggcggcga 54520
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatcc 310 ||||||||||||||||||||| Sbjct: 120383 cggcggcggtggcggcgatcc 120403
>dbj|AK109591.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C02, full insert sequence Length = 1312 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatcc 310 ||||||||||||||||||||| Sbjct: 338 cggcggcggtggcggcgatcc 358
>gb|AC109145.11| Mus musculus chromosome 1, clone RP23-109O14, complete sequence Length = 186661 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 59110 gagctccacagcagcgttcc 59091
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 105692 aagcggcggcggtggcggcg 105673
>ref|XM_550235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 112 gcggcggcggtggcggcgat 93
>ref|XM_480620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 854 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 441 agcggcggcggtggcggcga 422
>ref|XM_480397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 855 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 245 aagcggcggcggtggcggcg 264
>ref|NM_187466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatc 309 |||||||||||||||||||| Sbjct: 225 cggcggcggtggcggcgatc 244
>ref|XM_467860.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 65 gcggcggcggtggcggcgat 46
>ref|XM_465943.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6774 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 5 gcggcggcggtggcggcgat 24
>ref|XM_463632.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 1033 agcggcggcggtggcggcga 1052
>ref|NM_191998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 560 gcggcggcggtggcggcgat 541
>ref|XM_479594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2730 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 240 gcggcggcggtggcgccgatgcagccgagctc 209
>ref|NM_185973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccggcggcaagccctcctcc 249 |||||||||||||||||||| Sbjct: 773 ccggcggcaagccctcctcc 792
>ref|XM_479391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 347 gcggcggcggtggcggcgat 366
>gb|AC147514.12| Mus musculus chromosome 1, clone RP23-442A6, complete sequence Length = 187725 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 80172 gagctccacagcagcgttcc 80191
>gb|AE000665.1|MMAE000665 Mus musculus TCR beta locus from bases 501860 to 700960 (section 3 of 3) of the complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 95753 gagctccacagcagcgttcc 95734
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 91235 ccctcctccccctcgccccc 91254
>gb|AY022851.1| Oryza sativa microsatellite MRG5176 containing (CGG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 115 gcggcggcggtggcggcgat 134
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 130817 aagcggcggcggtggcggcg 130798
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 6960 aagcggcggcggtggcggcg 6941
>gb|AC161598.4| Mus musculus BAC clone RP23-360G8 from chromosome 7, complete sequence Length = 216748 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 135710 gagctccacagcagcgttcc 135691
>gb|AY644643.1| Oryza sativa (indica cultivar-group) hypothetical protein (RP2) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 375 gcggcggcggtggcggcgat 394
>gb|AC134573.5| Mus musculus BAC clone RP23-460N10 from chromosome 7, complete sequence Length = 177808 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 173029 gagctccacagcagcgttcc 173048
>gb|BC053007.1| Mus musculus basic helix-loop-helix domain containing, class B5, mRNA (cDNA clone MGC:62191 IMAGE:5686844), complete cds Length = 3207 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 1060 aagcggcggcggtggcggcg 1079
>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence Length = 221263 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tcagtccagtccagtccagc 42 |||||||||||||||||||| Sbjct: 207661 tcagtccagtccagtccagc 207642
>ref|NM_018028.2| Homo sapiens sterile alpha motif domain containing 4B (SAMD4B), mRNA Length = 4543 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 79 agcggcggcggtggcggcga 98
>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence Length = 183819 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 90757 gagctccacagcagcgttcc 90776
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 30712548 ccctcctccccctcgccccc 30712529 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatc 309 |||||||||||||||||||| Sbjct: 8779907 cggcggcggtggcggcgatc 8779926 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 8125381 gcggcggcggtggcggcgat 8125400
>gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosome 7, complete sequence Length = 202119 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 136651 gagctccacagcagcgttcc 136670
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 2278474 gcggcggcggtggcggcgat 2278455
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence Length = 159158 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 88586 gagctccacagcagcgttcc 88605
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 49842 ccctcctccccctcgccccc 49861
>gb|AC127576.3| Mus musculus BAC clone RP24-242F12 from chromosome 7, complete sequence Length = 169210 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 94276 gagctccacagcagcgttcc 94295
>gb|AC127675.4| Mus musculus BAC clone RP24-553O5 from chromosome 7, complete sequence Length = 155097 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 153439 gagctccacagcagcgttcc 153420
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 129327 gagctccacagcagcgttcc 129308
>gb|AC164645.4| Mus musculus BAC clone RP24-478G6 from chromosome 7, complete sequence Length = 211510 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 143176 gagctccacagcagcgttcc 143195
>gb|BC054518.1| Homo sapiens sterile alpha motif domain containing 4B, mRNA (cDNA clone MGC:60296 IMAGE:6501489), complete cds Length = 4543 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 79 agcggcggcggtggcggcga 98
>gb|BC080641.1| Homo sapiens sterile alpha motif domain containing 4B, mRNA (cDNA clone MGC:99832 IMAGE:6645022), complete cds Length = 2842 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 48 agcggcggcggtggcggcga 67
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 484230 aagcggcggcggtggcggcg 484249
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 21249 ccctcctccccctcgccccc 21230
>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence Length = 204130 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cagttccagttcctcctcat 23 |||||||||||||||||||| Sbjct: 8744 cagttccagttcctcctcat 8725
>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3 Length = 1979 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cagtccagtccagtccagcg 43 |||||||||||||||||||| Sbjct: 4 cagtccagtccagtccagcg 23
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atcagtccagtccagtccag 41 |||||||||||||||||||| Sbjct: 80488 atcagtccagtccagtccag 80507
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccagccaggcgatggcggcg 207 |||||||||||||||||||| Sbjct: 206994 ccagccaggcgatggcggcg 207013
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccagccaggcgatggcggcg 207 |||||||||||||||||||| Sbjct: 119020 ccagccaggcgatggcggcg 119039
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccagccaggcgatggcggcg 207 |||||||||||||||||||| Sbjct: 40332 ccagccaggcgatggcggcg 40351
>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence Length = 177420 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 108471 gagctccacagcagcgttcc 108490
>emb|AJ313422.1|PST313422 Pseudomonas stutzeri dctBDPMQ region, strain A15101 Length = 9408 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 8443 aagcggcggcggtggcggcg 8462
>gb|AC153854.7| Mus musculus 10 BAC RP23-203H5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181264 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 130396 gagctccacagcagcgttcc 130377
>gb|AC087588.10| Homo sapiens 12 BAC RP11-8P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146167 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 agttccagttcctcctcatc 24 |||||||||||||||||||| Sbjct: 17061 agttccagttcctcctcatc 17080
>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster A47934, complete sequence Length = 69301 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caaaaccctcgatctcgtcc 104 |||||||||||||||||||| Sbjct: 35281 caaaaccctcgatctcgtcc 35300
>dbj|AK001073.1| Homo sapiens cDNA FLJ10211 fis, clone HEMBA1006377 Length = 1693 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 105 agcggcggcggtggcggcga 124
>dbj|AB018442.1| Oryza sativa (japonica cultivar-group) mRNA for phytochrome C, complete cds Length = 3980 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 289 ccctcctccccctcgccccc 270
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 589546 gcggcggcggtggcggcgat 589565
>dbj|AK156310.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830016C15 product:hypothetical Retroviral nucleocapsid protein Gag/Retrovirus capsid, N-terminal core/Retrovirus capsid, C-terminal/Retroviral matrix protein containing protein, full insert sequence Length = 3144 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 118 gagctccacagcagcgttcc 99
>dbj|AB168284.1| Macaca fascicularis testis cDNA clone: QtsA-10976, similar to human protein tyrosine phosphatase type IVA, member 2(PTP4A2), transcript variant 1, mRNA, RefSeq: NM_003479.2 Length = 1899 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 95 agcggcggcggtggcggcga 76
>dbj|AK047201.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930035F16 product:basic helix-loop-helix domain containing, class B5, full insert sequence Length = 2596 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 794 aagcggcggcggtggcggcg 813
>gb|AC152449.4| Mus musculus BAC clone RP24-560O24 from chromosome 7, complete sequence Length = 166134 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 164217 gagctccacagcagcgttcc 164198
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatc 309 |||||||||||||||||||| Sbjct: 23060 cggcggcggtggcggcgatc 23079
>gb|AY224470.1| Oryza sativa (japonica cultivar-group) isolate 26645 disulfide isomerase-like protein mRNA, complete cds Length = 936 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 65 gcggcggcggtggcggcgat 46
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 174182 aagcggcggcggtggcggcg 174163
>dbj|AK076228.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401N01 product:BETA3 [Mus musculus], full insert sequence Length = 3108 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 984 aagcggcggcggtggcggcg 1003
>ref|NM_021560.2| Mus musculus basic helix-loop-helix domain containing, class B5 (Bhlhb5), mRNA Length = 3108 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 984 aagcggcggcggtggcggcg 1003
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 2354818 aagcggcggcggtggcggcg 2354799
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 6245451 agcggcggcggtggcggcga 6245432 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 5587521 gcggcggcggtggcggcgat 5587502 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 4876472 aagcggcggcggtggcggcg 4876453
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 19645102 agcggcggcggtggcggcga 19645121 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 4623205 gcggcggcggtggcggcgat 4623224
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 30803972 ccctcctccccctcgccccc 30803953 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cggcggcggtggcggcgatc 309 |||||||||||||||||||| Sbjct: 8777742 cggcggcggtggcggcgatc 8777761 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 8123216 gcggcggcggtggcggcgat 8123235
>gb|AC079777.5| Homo sapiens BAC clone RP11-317J9 from 2, complete sequence Length = 123997 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 catcagtccagtccagtcca 40 |||||||||||||||||||| Sbjct: 97124 catcagtccagtccagtcca 97143
>gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, complete cds Length = 6755 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ccctcctccccctcgccccc 260 |||||||||||||||||||| Sbjct: 1025 ccctcctccccctcgccccc 1006
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 56811 gcggcggcggtggcggcgat 56830
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 139957 agcggcggcggtggcggcga 139976
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 62651 agcggcggcggtggcggcga 62670
>gb|AC011445.6|AC011445 Homo sapiens chromosome 19 clone CTC-246B18, complete sequence Length = 138538 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 123648 agcggcggcggtggcggcga 123667
>gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, complete sequence Length = 172833 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cagttccagttcctcctcat 23 |||||||||||||||||||| Sbjct: 2502 cagttccagttcctcctcat 2521
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccggcggcaagccctcctcc 249 |||||||||||||||||||| Sbjct: 46265 ccggcggcaagccctcctcc 46246
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 88128 gcggcggcggtggcggcgat 88147
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 40486 gcggcggcggtggcggcgat 40505
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 156997 gcggcggcggtggcggcgat 157016
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 105408 gcggcggcggtggcggcgat 105427
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 320297 gcggcggcggtggcggcgat 320278
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 126834 agcggcggcggtggcggcga 126853
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 29558 agcggcggcggtggcggcga 29577
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 110569 gcggcggcggtggcggcgat 110588
>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1089_A02 Length = 117908 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 65093 agcggcggcggtggcggcga 65112
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 124045 agcggcggcggtggcggcga 124064
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 93499 gcggcggcggtggcgccgatgcagccgagctc 93468
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 43563 gcggcggcggtggcgccgatgcagccgagctc 43532
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgatccagcccagctc 320 ||||||||||||||| |||| ||||| ||||| Sbjct: 56402 gcggcggcggtggcgccgatgcagccgagctc 56371
>gb|AY566195.1| Plodia interpunctella transcription factor E75B mRNA, complete cds Length = 2541 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 2158 gcggcggcggtggcggcgat 2139
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 34537 agcggcggcggtggcggcga 34556
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 111599 gcggcggcggtggcggcgat 111618
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 131044 gcggcggcggtggcggcgat 131025
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 52835 gcggcggcggtggcggcgat 52816
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 75626 gcggcggcggtggcggcgat 75645
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 35726 aagcggcggcggtggcggcg 35707
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 81266 aagcggcggcggtggcggcg 81247
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1734_E04 Length = 101439 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 31588 agcggcggcggtggcggcga 31569
>emb|BX544880.3| Mouse DNA sequence from clone RP23-119F1 on chromosome X, complete sequence Length = 208959 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 85409 gagctccacagcagcgttcc 85390
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 108844 agcggcggcggtggcggcga 108825
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 42897 gcggcggcggtggcggcgat 42878
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 113749 gcggcggcggtggcggcgat 113730
>dbj|AK110728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E07, full insert sequence Length = 854 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 agcggcggcggtggcggcga 307 |||||||||||||||||||| Sbjct: 441 agcggcggcggtggcggcga 422
>gb|AF218865.1|AF218865 Mus musculus BETA3 mRNA, complete cds Length = 2827 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 682 aagcggcggcggtggcggcg 701
>dbj|AK073349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026I12, full insert sequence Length = 1835 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 129 gcggcggcggtggcggcgat 148
>emb|AL645789.14| Zebrafish DNA sequence from clone RP71-11B17 in linkage group 22, complete sequence Length = 167635 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atcagtccagtccagtccag 41 |||||||||||||||||||| Sbjct: 120763 atcagtccagtccagtccag 120744
>gb|AC154489.2| Mus musculus BAC clone RP23-205G15 from chromosome 14, complete sequence Length = 210483 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 7332 gagctccacagcagcgttcc 7313
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 catcagtccagtccagtcca 40 |||||||||||||||||||| Sbjct: 8324 catcagtccagtccagtcca 8305
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atcagtccagtccagtccag 41 |||||||||||||||||||| Sbjct: 288311 atcagtccagtccagtccag 288330
>gb|AF107342.1|AF107342 Mus musculus Balb/c trypsinogen 16 gene, complete cds Length = 42794 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 26984 gagctccacagcagcgttcc 26965
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccagccaggcgatggcggcg 207 |||||||||||||||||||| Sbjct: 3765108 ccagccaggcgatggcggcg 3765089
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 aagcggcggcggtggcggcg 306 |||||||||||||||||||| Sbjct: 2362599 aagcggcggcggtggcggcg 2362580
>gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complete sequence Length = 184253 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 112110 gagctccacagcagcgttcc 112091
>gb|AC127420.4| Mus musculus BAC clone RP24-244P2 from 7, complete sequence Length = 158392 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 17329 gagctccacagcagcgttcc 17348
>gb|AC140226.6| Mus musculus BAC clone RP24-487E24 from 3, complete sequence Length = 206882 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 196585 gagctccacagcagcgttcc 196566
>gb|AC149279.3| Mus musculus BAC clone RP24-89F23 from 7, complete sequence Length = 210311 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 63125 gagctccacagcagcgttcc 63144
>gb|AC142273.3| Mus musculus BAC clone RP23-236A6 from 10, complete sequence Length = 130802 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 41695 gagctccacagcagcgttcc 41676
>gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complete sequence Length = 209929 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tcagtccagtccagtccagc 42 |||||||||||||||||||| Sbjct: 14716 tcagtccagtccagtccagc 14697
>gb|AC159253.3| Mus musculus BAC clone RP24-110K11 from chromosome 3, complete sequence Length = 197735 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gagctccacagcagcgttcc 158 |||||||||||||||||||| Sbjct: 133774 gagctccacagcagcgttcc 133793
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 catcagtccagtccagtcca 40 |||||||||||||||||||| Sbjct: 22752 catcagtccagtccagtcca 22771
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 cccgccctccttccccgacccccc 126 ||||||||||||||||| |||||| Sbjct: 53736 cccgccctccttccccgccccccc 53713
>gb|M63477.1|PSUAFA02 P.americanus antifreeze protein pseudogene, exon 2 and complete cds Length = 1046 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gcggcggcggtggcggcgat 308 |||||||||||||||||||| Sbjct: 492 gcggcggcggtggcggcgat 473
>gb|J03956.1|NEUVMA2A N.crassa vacuolar ATPase 57-Kd subunit (vma-2) gene, complete cds Length = 3519 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atcagtccagtccagtccag 41 |||||||||||||||||||| Sbjct: 762 atcagtccagtccagtccag 781 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,566,345 Number of Sequences: 3902068 Number of extensions: 2566345 Number of successful extensions: 107373 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103207 Number of HSP's gapped (non-prelim): 4166 length of query: 320 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 298 effective length of database: 17,147,199,772 effective search space: 5109865532056 effective search space used: 5109865532056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
