ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.071
2emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4,... 46 0.071
3gb|AC151486.1| Pan troglodytes chromosome X clone PTB-029D14 map... 42 1.1
4gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
6dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.1
7dbj|AK072728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
9gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
10ref|NM_193562.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
11ref|XM_463688.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
12gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
13gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
14gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.4
15ref|XM_866667.1| PREDICTED: Bos taurus similar to nuclear factor... 40 4.4
16gb|AY658399.1| Synthetic construct Peudomonas aeruginosa clone F... 40 4.4
17ref|NM_011365.2| Mus musculus intersectin 2 (Itsn2), mRNA 40 4.4
18gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 4.4
19gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, comple... 40 4.4
20gb|AY993309.1| Uncultured bacterium clone C21_n21 16S ribosomal ... 40 4.4
21gb|AY992962.1| Uncultured bacterium clone C22_l05 16S ribosomal ... 40 4.4
22gb|AY992412.1| Uncultured bacterium clone C23_c14 16S ribosomal ... 40 4.4
23gb|AY990698.1| Uncultured bacterium clone C9_D04 16S ribosomal R... 40 4.4
24gb|AY990549.1| Uncultured bacterium clone C9_K19 16S ribosomal R... 40 4.4
25gb|AY990465.1| Uncultured bacterium clone C3_J16 16S ribosomal R... 40 4.4
26emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 4.4
27gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosom... 40 4.4
28gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.4
29gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, com... 40 4.4
30dbj|AB126310.1| Uncultured bacterium gene for 16S rRNA, partial ... 40 4.4
31gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.4
32ref|XM_689770.1| PREDICTED: Danio rerio similar to tight junctio... 40 4.4
33dbj|AK163807.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.4
34gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84... 40 4.4
35dbj|AK029325.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 4.4
36dbj|AK042449.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 4.4
37dbj|AK076489.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 4.4
38dbj|AK034367.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 4.4
39gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT... 40 4.4
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
41dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
45dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
46gb|AE004498.1| Pseudomonas aeruginosa PAO1, section 59 of 529 of... 40 4.4
47dbj|AP003342.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
48dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
49dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
50dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
51dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
52dbj|AK119412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
53ref|XM_321148.2| Anopheles gambiae str. PEST ENSANGP00000007922 ... 40 4.4
54dbj|AK070666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
55dbj|AK061216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
56emb|CR925820.5| Zebrafish DNA sequence from clone CH211-22E9 in ... 40 4.4
57gb|AC001653.1|AC001653 Drosophila melanogaster, chromosome 3R, r... 40 4.4
58gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11... 40 4.4
59emb|BX248100.9| Zebrafish DNA sequence from clone CH211-222O11 i... 40 4.4
60gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.4
61emb|BX649429.13| Zebrafish DNA sequence from clone DKEY-1H4 in l... 40 4.4
62gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
63gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 4.4
64gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
65emb|X00854.1|DMFTZ1 Drosophila melanogaster ftz gene 40 4.4
66dbj|AB030826.1| Pseudomonas aeruginosa genomic DNA, partial sequ... 40 4.4
67dbj|AB030825.1| Pseudomonas aeruginosa genomic DNA, partial sequ... 40 4.4
68dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 110     cggtgacccggcggcggcggccg 132
               |||||||||||||||||||||||
Sbjct: 6073950 cggtgacccggcggcggcggccg 6073928
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>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13,
             complete sequence
          Length = 137572

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 110   cggtgacccggcggcggcggccg 132
             |||||||||||||||||||||||
Sbjct: 97348 cggtgacccggcggcggcggccg 97326
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>gb|AC151486.1| Pan troglodytes chromosome X clone PTB-029D14 map human ortholog q28,
             complete sequence
          Length = 154019

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 46    gccggaccaccgcatccctcctccc 70
             |||||||| ||||||||||||||||
Sbjct: 82153 gccggacccccgcatccctcctccc 82129
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>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    acggtgacccggcggcggcgg 129
              |||||||||||||||||||||
Sbjct: 134708 acggtgacccggcggcggcgg 134728
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 109      acggtgacccggcggcggcgg 129
                |||||||||||||||||||||
Sbjct: 26455012 acggtgacccggcggcggcgg 26454992
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 12      tcggcgaccgcgtaccgctgc 32
               |||||||||||||||||||||
Sbjct: 1538780 tcggcgaccgcgtaccgctgc 1538760
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>dbj|AK072728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140D21, full
           insert sequence
          Length = 1290

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 189 tgcggcgcctgctaccagctgaggtgcag 217
           |||||||||||||||||| | ||||||||
Sbjct: 301 tgcggcgcctgctaccagttaaggtgcag 329
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 109      acggtgacccggcggcggcgg 129
                |||||||||||||||||||||
Sbjct: 26780276 acggtgacccggcggcggcgg 26780256
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>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14,
              complete sequence
          Length = 159035

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccggcggcggcggccgaagg 136
              ||||||||||||||||||||
Sbjct: 138351 ccggcggcggcggccgaagg 138370
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>ref|NM_193562.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 cggcggcggcggccgaagggggga 141
           ||||||||||||||| ||||||||
Sbjct: 414 cggcggcggcggccggagggggga 437
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>ref|XM_463688.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 61  ccctcctcccttccgacgccggcg 84
           |||||||||| |||||||||||||
Sbjct: 692 ccctcctcccctccgacgccggcg 669
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>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
             complete sequence
          Length = 164709

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   cggcggcggcggccgaagggggga 141
             |||||||||||||||||| |||||
Sbjct: 34165 cggcggcggcggccgaagtgggga 34188
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>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03,
              complete sequence
          Length = 151814

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccggcggcggcggccgaagg 136
              ||||||||||||||||||||
Sbjct: 107203 ccggcggcggcggccgaagg 107222
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>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053F13, from chromosome 5, complete sequence
          Length = 149538

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccggcggcggcggccgaagg 136
             ||||||||||||||||||||
Sbjct: 21781 ccggcggcggcggccgaagg 21800
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>ref|XM_866667.1| PREDICTED: Bos taurus similar to nuclear factor of activated
           T-cells, cytoplasmic, calcineurin-dependent 2
           interacting protein, transcript variant 2 (LOC505998),
           mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 cggcggcggcggccgaaggg 137
           ||||||||||||||||||||
Sbjct: 39  cggcggcggcggccgaaggg 58
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>gb|AY658399.1| Synthetic construct Peudomonas aeruginosa clone FLH031477.01F
           PA0632 gene, partial cds
          Length = 231

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   ggctcctcggcgaccgcgtaccgc 29
           ||||||||| ||||||||||||||
Sbjct: 197 ggctcctcgccgaccgcgtaccgc 220
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>ref|NM_011365.2| Mus musculus intersectin 2 (Itsn2), mRNA
          Length = 6001

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 113 tgacccggcggcggcggccg 132
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>gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section 20 of 121 of the
             complete plasmid sequence
          Length = 12359

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   cccggcggcggcggccgaag 135
             ||||||||||||||||||||
Sbjct: 11054 cccggcggcggcggccgaag 11073
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>gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, complete sequence
          Length = 176398

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    ccaccgcatccctcctcccttccg 75
             ||||||||||| ||||||||||||
Sbjct: 85661 ccaccgcatccttcctcccttccg 85638
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>gb|AY993309.1| Uncultured bacterium clone C21_n21 16S ribosomal RNA gene, partial
           sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 191 ggcggctgggcatgcggcgc 210
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>gb|AY992962.1| Uncultured bacterium clone C22_l05 16S ribosomal RNA gene, partial
           sequence
          Length = 1354

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 205 ggcggctgggcatgcggcgc 224
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>gb|AY992412.1| Uncultured bacterium clone C23_c14 16S ribosomal RNA gene, partial
           sequence
          Length = 1357

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 195 ggcggctgggcatgcggcgc 214
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>gb|AY990698.1| Uncultured bacterium clone C9_D04 16S ribosomal RNA gene, partial
           sequence
          Length = 1294

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 169 ggcggctgggcatgcggcgc 188
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>gb|AY990549.1| Uncultured bacterium clone C9_K19 16S ribosomal RNA gene, partial
           sequence
          Length = 1279

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 169 ggcggctgggcatgcggcgc 188
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>gb|AY990465.1| Uncultured bacterium clone C3_J16 16S ribosomal RNA gene, partial
           sequence
          Length = 721

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 171 ggcggctgggcatgcggcgc 190
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    cggtgacccggcggcggcgg 129
              ||||||||||||||||||||
Sbjct: 215711 cggtgacccggcggcggcgg 215730
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>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence
          Length = 187225

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tgacccggcggcggcggccg 132
              ||||||||||||||||||||
Sbjct: 127168 tgacccggcggcggcggccg 127187
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>gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0082N11, from chromosome 10, complete sequence
          Length = 127525

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   ccggcggcggcggccgaagg 136
             ||||||||||||||||||||
Sbjct: 21200 ccggcggcggcggccgaagg 21181
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>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence
          Length = 166439

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 103   gcgggtacggtgacccggcggcggcggc 130
             |||||||||| ||| |||||||||||||
Sbjct: 27787 gcgggtacggggacgcggcggcggcggc 27760
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>dbj|AB126310.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:96G08
          Length = 529

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ggcggctgggcatgcggcgc 196
           ||||||||||||||||||||
Sbjct: 225 ggcggctgggcatgcggcgc 244
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>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0082N11, from chromosome 10, complete sequence
          Length = 183345

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    ccggcggcggcggccgaagg 136
              ||||||||||||||||||||
Sbjct: 144545 ccggcggcggcggccgaagg 144526
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>ref|XM_689770.1| PREDICTED: Danio rerio similar to tight junction protein 1 isoform a
            (LOC566500), mRNA
          Length = 3334

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 199  gctaccagctgaggtgcaggggcc 222
            |||||| |||||||||||||||||
Sbjct: 3066 gctacctgctgaggtgcaggggcc 3043
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>dbj|AK163807.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130040M22 product:Intersectin 2 (SH3
           domain-containing protein 1B) (SH3P18) (SH3P18-like WASP
           associated protein) homolog [Homo sapiens], full insert
           sequence
          Length = 2254

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 87  tgacccggcggcggcggccg 106
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>gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84A-84B, BAC clone
             BACR32J03, complete sequence
          Length = 190642

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    accaccgcatccctcctcccttcc 74
             |||||||||||||| |||||||||
Sbjct: 33824 accaccgcatccctgctcccttcc 33847
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>dbj|AK029325.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4832424L08 product:SH3 domain protein 1B,
           full insert sequence
          Length = 2641

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 60  tgacccggcggcggcggccg 79
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>dbj|AK042449.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630092L24 product:SH3 domain protein 1B,
           full insert sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 83  tgacccggcggcggcggccg 102
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>dbj|AK076489.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4833427H02 product:unclassifiable, full
           insert sequence
          Length = 1790

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 598 tgacccggcggcggcggccg 579
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>dbj|AK034367.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330184B19 product:ESE2L PROTEIN
           homolog [Mus musculus], full insert sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgacccggcggcggcggccg 132
           ||||||||||||||||||||
Sbjct: 114 tgacccggcggcggcggccg 133
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>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence
          Length = 429825

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     accaccgcatccctcctcccttcc 74
              |||||||||||||| |||||||||
Sbjct: 189968 accaccgcatccctgctcccttcc 189945
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     ccggcggcggcggccgaagg 136
               ||||||||||||||||||||
Sbjct: 7510681 ccggcggcggcggccgaagg 7510662
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccggcggcggcggccgaagg 136
                ||||||||||||||||||||
Sbjct: 16190693 ccggcggcggcggccgaagg 16190712
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccggcggcggcggccgaagg 136
                ||||||||||||||||||||
Sbjct: 29490326 ccggcggcggcggccgaagg 29490345



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 118      cggcggcggcggccgaagggggga 141
                |||||||||||||||||| |||||
Sbjct: 18866787 cggcggcggcggccgaagtgggga 18866810



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccggcggcggcggccgaagg 136
                ||||||||||||||||||||
Sbjct: 10121687 ccggcggcggcggccgaagg 10121706
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 45      cgccggaccaccgcatccctcctc 68
               |||||| |||||||||||||||||
Sbjct: 3634629 cgccggcccaccgcatccctcctc 3634606
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 61       ccctcctcccttccgacgccggcg 84
                |||||||||| |||||||||||||
Sbjct: 40658696 ccctcctcccctccgacgccggcg 40658673



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 118      cggcggcggcggccgaagggggga 141
                ||||||||||||||| ||||||||
Sbjct: 21622719 cggcggcggcggccggagggggga 21622696
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 61     ccctcctcccttccgacgccggcg 84
              |||||||||| |||||||||||||
Sbjct: 100674 ccctcctcccctccgacgccggcg 100651
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>gb|AE004498.1| Pseudomonas aeruginosa PAO1, section 59 of 529 of the complete genome
          Length = 12555

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ggctcctcggcgaccgcgtaccgc 29
             ||||||||| ||||||||||||||
Sbjct: 12456 ggctcctcgccgaccgcgtaccgc 12479
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>dbj|AP003342.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0049O23
          Length = 121038

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 118    cggcggcggcggccgaagggggga 141
              ||||||||||||||| ||||||||
Sbjct: 116258 cggcggcggcggccggagggggga 116235
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>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0697C12
          Length = 149098

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   cggcggcggcggccgaagggggga 141
             ||||||||||||||| ||||||||
Sbjct: 79272 cggcggcggcggccggagggggga 79249
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1344_B01
          Length = 170912

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  ccggcggcggcggccgaagg 136
            ||||||||||||||||||||
Sbjct: 7209 ccggcggcggcggccgaagg 7228
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556H01
          Length = 149800

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccggcggcggcggccgaagg 136
             ||||||||||||||||||||
Sbjct: 95294 ccggcggcggcggccgaagg 95313
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     cgccggaccaccgcatccctcctc 68
              |||||| |||||||||||||||||
Sbjct: 115919 cgccggcccaccgcatccctcctc 115896
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>dbj|AK119412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F10, full
           insert sequence
          Length = 3621

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 cggcggcggcggccgaagggggga 141
           |||||||||||||||||| |||||
Sbjct: 156 cggcggcggcggccgaagtgggga 179
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>ref|XM_321148.2| Anopheles gambiae str. PEST ENSANGP00000007922 (ENSANGG00000005977),
            partial mRNA
          Length = 4434

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  ggtgacccggcggcggcggc 130
            ||||||||||||||||||||
Sbjct: 2576 ggtgacccggcggcggcggc 2557
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>dbj|AK070666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058O09, full
           insert sequence
          Length = 889

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 cggcggcggcggccgaagggggga 141
           ||||||||||||||| ||||||||
Sbjct: 130 cggcggcggcggccggagggggga 153
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>dbj|AK061216.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E05, full
           insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 cggcggcggcggccgaagggggga 141
           ||||||||||||||| ||||||||
Sbjct: 114 cggcggcggcggccggagggggga 137
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>emb|CR925820.5| Zebrafish DNA sequence from clone CH211-22E9 in linkage group 10,
              complete sequence
          Length = 173023

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ccaccgcatccctcctccct 71
              ||||||||||||||||||||
Sbjct: 145990 ccaccgcatccctcctccct 145971
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>gb|AC001653.1|AC001653 Drosophila melanogaster, chromosome 3R, region 84B1-84B2, P1 clone
             DS07876, complete sequence
          Length = 66991

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    accaccgcatccctcctcccttcc 74
             |||||||||||||| |||||||||
Sbjct: 29072 accaccgcatccctgctcccttcc 29095
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>gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11 of 118 of the
             complete sequence
          Length = 308146

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    accaccgcatccctcctcccttcc 74
             |||||||||||||| |||||||||
Sbjct: 88684 accaccgcatccctgctcccttcc 88707
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>emb|BX248100.9| Zebrafish DNA sequence from clone CH211-222O11 in linkage group 7,
             complete sequence
          Length = 223489

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   gctaccagctgaggtgcaggggcc 222
             |||||| |||||||||||||||||
Sbjct: 24668 gctacctgctgaggtgcaggggcc 24691
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 110     cggtgacccggcggcggcgg 129
               ||||||||||||||||||||
Sbjct: 5870607 cggtgacccggcggcggcgg 5870588
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>emb|BX649429.13| Zebrafish DNA sequence from clone DKEY-1H4 in linkage group 7, complete
              sequence
          Length = 268480

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    gctaccagctgaggtgcaggggcc 222
              |||||| |||||||||||||||||
Sbjct: 203956 gctacctgctgaggtgcaggggcc 203933
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     ccggcggcggcggccgaagg 136
               ||||||||||||||||||||
Sbjct: 7514880 ccggcggcggcggccgaagg 7514861
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     cagccggtggcggtggccag 314
               ||||||||||||||||||||
Sbjct: 6172146 cagccggtggcggtggccag 6172127
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0086G17, complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccggcggcggcggccgaagg 136
             ||||||||||||||||||||
Sbjct: 74596 ccggcggcggcggccgaagg 74615
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>emb|X00854.1|DMFTZ1 Drosophila melanogaster ftz gene
          Length = 3554

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 51   accaccgcatccctcctcccttcc 74
            |||||||||||||| |||||||||
Sbjct: 3244 accaccgcatccctgctcccttcc 3267
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>dbj|AB030826.1| Pseudomonas aeruginosa genomic DNA, partial sequence, strain:PML14
          Length = 6744

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 6    ggctcctcggcgaccgcgtaccgc 29
            ||||||||| ||||||||||||||
Sbjct: 5080 ggctcctcgccgaccgcgtaccgc 5103
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>dbj|AB030825.1| Pseudomonas aeruginosa genomic DNA, partial sequence, strain:PAO1
          Length = 23355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ggctcctcggcgaccgcgtaccgc 29
             ||||||||| ||||||||||||||
Sbjct: 19737 ggctcctcgccgaccgcgtaccgc 19760
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0482D04
          Length = 144583

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 61     ccctcctcccttccgacgccggcg 84
              |||||||||| |||||||||||||
Sbjct: 138711 ccctcctcccctccgacgccggcg 138688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,594,801
Number of Sequences: 3902068
Number of extensions: 2594801
Number of successful extensions: 79706
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78127
Number of HSP's gapped (non-prelim): 1579
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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