ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast61g06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 165 catgatggatcacctgagcctggtgccctacgagggaggcagcggagccgggggcgacgc 224 |||||||||||||||||||||||||||||||||||| ||||||| | |||||| | | Sbjct: 44677 catgatggatcacctgagcctggtgccctacgagggcggcagcgccggcgggggaggagg 44618 Query: 225 cggggccaagtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggcctt 284 || | |||||||||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 44617 tggagggaagtacaaggagtgcatgcggaaccacgcggcggcgatgggcgggcaggcgtt 44558 Query: 285 cgacggctgcggggagtacatgccggcctcgccggactcgctcaagtgcgccgcctgcgg 344 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 44557 cgacgggtgcggggagtacatgccggcgtcgcccgactcgctcaagtgcgccgcgtgcgg 44498 Query: 345 ctgtcaccgcagcttccaccgccgcgc 371 ||| ||||||||||||||||||||||| Sbjct: 44497 ctgccaccgcagcttccaccgccgcgc 44471
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 165 catgatggatcacctgagcctggtgccctacgagggaggcagcggagccgggggcgacgc 224 |||||||||||||||||||||||||||||||||||| ||||||| | |||||| | | Sbjct: 132224 catgatggatcacctgagcctggtgccctacgagggcggcagcgccggcgggggaggagg 132165 Query: 225 cggggccaagtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggcctt 284 || | |||||||||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 132164 tggagggaagtacaaggagtgcatgcggaaccacgcggcggcgatgggcgggcaggcgtt 132105 Query: 285 cgacggctgcggggagtacatgccggcctcgccggactcgctcaagtgcgccgcctgcgg 344 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 132104 cgacgggtgcggggagtacatgccggcgtcgcccgactcgctcaagtgcgccgcgtgcgg 132045 Query: 345 ctgtcaccgcagcttccaccgccgcgc 371 ||| ||||||||||||||||||||||| Sbjct: 132044 ctgccaccgcagcttccaccgccgcgc 132018
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 236 bits (119), Expect = 5e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 165 catgatggatcacctgagcctggtgccctacgagggaggcagcggagccgggggcgacgc 224 |||||||||||||||||||||||||||||||||||| ||||||| | |||||| | | Sbjct: 21610135 catgatggatcacctgagcctggtgccctacgagggcggcagcgccggcgggggaggagg 21610076 Query: 225 cggggccaagtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggcctt 284 || | |||||||||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 21610075 tggagggaagtacaaggagtgcatgcggaaccacgcggcggcgatgggcgggcaggcgtt 21610016 Query: 285 cgacggctgcggggagtacatgccggcctcgccggactcgctcaagtgcgccgcctgcgg 344 |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 21610015 cgacgggtgcggggagtacatgccggcgtcgcccgactcgctcaagtgcgccgcgtgcgg 21609956 Query: 345 ctgtcaccgcagcttccaccgccgcgc 371 ||| ||||||||||||||||||||||| Sbjct: 21609955 ctgccaccgcagcttccaccgccgcgc 21609929
>ref|XM_472571.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 852 Score = 228 bits (115), Expect = 1e-56 Identities = 181/203 (89%) Strand = Plus / Plus Query: 169 atggatcacctgagcctggtgccctacgagggaggcagcggagccgggggcgacgccggg 228 |||||||||||||||||||||||||||||||| ||||||| | |||||| | | || Sbjct: 1 atggatcacctgagcctggtgccctacgagggcggcagcgccggcgggggaggaggtgga 60 Query: 229 gccaagtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgac 288 | |||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 61 gggaagtacaaggagtgcatgcggaaccacgcggcggcgatgggcgggcaggcgttcgac 120 Query: 289 ggctgcggggagtacatgccggcctcgccggactcgctcaagtgcgccgcctgcggctgt 348 || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 121 gggtgcggggagtacatgccggcgtcgcccgactcgctcaagtgcgccgcgtgcggctgc 180 Query: 349 caccgcagcttccaccgccgcgc 371 ||||||||||||||||||||||| Sbjct: 181 caccgcagcttccaccgccgcgc 203
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 6e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 14739361 cgctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 14739404 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||| ||||||||| |||||||| ||||||| |||||||||||| Sbjct: 14758747 tcgctcaggtgcgccgcgtgcggctgccaccgcaacttccaccgccg 14758701 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 253 aaccacgcggctgccatgggcggccaggccttcgacggctgcggggagtacatgccggcc 312 |||||||||| || ||| |||||||| ||| | ||||||||||| |||| |||| ||||| Sbjct: 17650338 aaccacgcggttggcatcggcggccacgccgtggacggctgcggcgagttcatggcggcc 17650279
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 79.8 bits (40), Expect = 6e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24750 cgctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 24793 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||| ||||||||| |||||||| ||||||| |||||||||||| Sbjct: 44136 tcgctcaggtgcgccgcgtgcggctgccaccgcaacttccaccgccg 44090
>dbj|AK058840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D10, full insert sequence Length = 652 Score = 79.8 bits (40), Expect = 6e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 271 cgctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 314
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 325 ctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 43560 ctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 43601 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 241 gagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctgcggggag 300 |||||| ||||||||||||| || || ||||||||||| | | | ||||| ||| ||||| Sbjct: 43467 gagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtggacggatgcagggag 43526 Query: 301 tacatgccg 309 | ||||||| Sbjct: 43527 ttcatgccg 43535
>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 325 ctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 30832 ctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 30873 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 241 gagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctgcggggag 300 |||||| ||||||||||||| || || ||||||||||| | | | ||||| ||| ||||| Sbjct: 30739 gagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtggacggatgcagggag 30798 Query: 301 tacatgccg 309 | ||||||| Sbjct: 30799 ttcatgccg 30807
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 325 ctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 28615768 ctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 28615809 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 241 gagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctgcggggag 300 |||||| ||||||||||||| || || ||||||||||| | | | ||||| ||| ||||| Sbjct: 28615675 gagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtggacggatgcagggag 28615734 Query: 301 tacatgccg 309 | ||||||| Sbjct: 28615735 ttcatgccg 28615743
>dbj|AK111350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G06, full insert sequence Length = 1096 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 325 ctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 321 ctcaagtgcgccgcctgcggctgccaccgcagcttccaccgc 362 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 241 gagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctgcggggag 300 |||||| ||||||||||||| || || ||||||||||| | | | ||||| ||| ||||| Sbjct: 228 gagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtggacggatgcagggag 287 Query: 301 tacatgccg 309 | ||||||| Sbjct: 288 ttcatgccg 296
>dbj|AK069500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H01, full insert sequence Length = 1286 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccgc 369 ||||||| ||||||||| |||||||| ||||||| ||||||||||||| Sbjct: 329 tcgctcaggtgcgccgcgtgcggctgccaccgcaacttccaccgccgc 376
>dbj|AP007251.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa234E14 Length = 34070 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||| ||||||||||| |||||||||||||||||||| Sbjct: 33607 tgcgcggcctgcggctgccaccgcagcttccaccgccg 33570
>ref|XM_467383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1284 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccgcg 370 |||||||| |||||||| ||||| |||||||||||||||| Sbjct: 592 tgcgccgcgtgcggctgccaccgtagcttccaccgccgcg 631
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||| | ||||||||||| ||||||| |||||||||| Sbjct: 74061 cgctcaagtgctcggcctgcggctgccaccgcaacttccaccgc 74018
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccgcg 370 |||||||| |||||||| ||||| |||||||||||||||| Sbjct: 136597 tgcgccgcgtgcggctgccaccgtagcttccaccgccgcg 136636
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||| | ||||||||||| ||||||| |||||||||| Sbjct: 7614975 cgctcaagtgctcggcctgcggctgccaccgcaacttccaccgc 7614932 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| ||||| ||||||||| Sbjct: 1299845 tgcgccgcctgcggctgccaccggagcttccac 1299877 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 1299736 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 1299795 Query: 294 c 294 | Sbjct: 1299796 c 1299796 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggcagcggagccggggg 218 |||||||||||||||||||| Sbjct: 20309078 ggaggcagcggagccggggg 20309059
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccgcg 370 |||||||| |||||||| ||||| |||||||||||||||| Sbjct: 29226034 tgcgccgcgtgcggctgccaccgtagcttccaccgccgcg 29225995
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccgcg 370 |||||||| |||||||| ||||| |||||||||||||||| Sbjct: 23379 tgcgccgcgtgcggctgccaccgtagcttccaccgccgcg 23340
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgccgcg 370 |||||||| |||||||| ||||| |||||||||||||||| Sbjct: 116002 tgcgccgcgtgcggctgccaccgtagcttccaccgccgcg 115963
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 323 cgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||| | ||||||||||| ||||||| |||||||||| Sbjct: 7685062 cgctcaagtgctcggcctgcggctgccaccgcaacttccaccgc 7685019 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| ||||| ||||||||| Sbjct: 1297566 tgcgccgcctgcggctgccaccggagcttccac 1297598 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 1297457 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 1297516 Query: 294 c 294 | Sbjct: 1297517 c 1297517 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggcagcggagccggggg 218 |||||||||||||||||||| Sbjct: 20619317 ggaggcagcggagccggggg 20619298
>ref|XM_482591.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 220 tcgctcaagtgcgccgcgtgtgggtgccaccgcaacttccaccgccg 266
>ref|XM_482587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 618 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 330 gtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||| ||||| || |||||||||||||||||||| Sbjct: 118 gtgcgccgcgtgcggatgccaccgcagcttccaccgccg 156
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 |||||||||||||| || ||||| || ||||||| |||||||||||| Sbjct: 71232 tcgctcaagtgcgcggcgtgcgggtgccaccgcaacttccaccgccg 71278
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 21301502 tcgctcaagtgcgccgcgtgtgggtgccaccgcaacttccaccgccg 21301456 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 330 gtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||| ||||| || |||||||||||||||||||| Sbjct: 21273587 gtgcgccgcgtgcggatgccaccgcagcttccaccgccg 21273625 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||| ||||| | |||||||||| Sbjct: 23657753 tgcgccgcctgcggctgccaccgtaacttccaccgc 23657718 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcagcttccaccgccgcgcg 372 |||||||||||||||||||| Sbjct: 20190213 gcagcttccaccgccgcgcg 20190232
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccg 365 ||||||||||||||||| ||||||| ||||||||| Sbjct: 35286 tgcgccgcctgcggctgccaccgcaacttccaccg 35320 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tgcatgcgcaaccacgcggc 263 |||||||||||||||||||| Sbjct: 35193 tgcatgcgcaaccacgcggc 35212
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 127779 tcgctcaagtgcgccgcgtgtgggtgccaccgcaacttccaccgccg 127733 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 330 gtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||| ||||| || |||||||||||||||||||| Sbjct: 99864 gtgcgccgcgtgcggatgccaccgcagcttccaccgccg 99902
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 322 tcgctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||||||||||| || || || ||||||| |||||||||||| Sbjct: 1427 tcgctcaagtgcgccgcgtgtgggtgccaccgcaacttccaccgccg 1381
>emb|Y18578.1|FBI18578 Flaveria bidentis partial mRNA for ZF-HD homeobox protein (hb1 gene), clone FbHB1 Length = 814 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 326 tcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 |||| ||||||||||| ||||| ||||||| |||||||||||| Sbjct: 159 tcaaatgcgccgcctgtggctgccaccgcaacttccaccgccg 201
>emb|Y18577.1|FTR18577 Flaveria trinervia mRNA for ZF-HD homeobox protein (hb1 gene) clone FtHB1 Length = 1364 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 326 tcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 |||| ||||||||||| ||||| ||||||| |||||||||||| Sbjct: 282 tcaaatgcgccgcctgtggctgccaccgcaacttccaccgccg 324
>dbj|AK107904.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F11, full insert sequence Length = 618 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 330 gtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||||||| ||||| || |||||||||||||||||||| Sbjct: 118 gtgcgccgcgtgcggatgccaccgcagcttccaccgccg 156
>ref|XM_469572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggc 263 ||||| |||||||||||||||||||||||| Sbjct: 33 gtacagggagtgcatgcgcaaccacgcggc 62
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggc 263 ||||| |||||||||||||||||||||||| Sbjct: 28797113 gtacagggagtgcatgcgcaaccacgcggc 28797142
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggc 263 ||||| |||||||||||||||||||||||| Sbjct: 28888437 gtacagggagtgcatgcgcaaccacgcggc 28888466
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggc 263 ||||| |||||||||||||||||||||||| Sbjct: 104094 gtacagggagtgcatgcgcaaccacgcggc 104123
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| ||||| ||||||||| Sbjct: 90770 tgcgccgcctgcggctgccaccggagcttccac 90738 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 90879 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 90820 Query: 294 c 294 | Sbjct: 90819 c 90819
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 1179562 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 1179621 Query: 294 cggggagtacatg 306 | |||||| |||| Sbjct: 1179622 ccgggagttcatg 1179634 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 335 ccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||| ||||||| |||||||||| Sbjct: 5674765 ccgcctgcggctgccaccgcaacttccaccgc 5674796 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| |||| ||||||||| Sbjct: 1179671 tgcgccgcctgcggctgccaccagagcttccac 1179703
>dbj|AK063715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C04, full insert sequence Length = 739 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| ||||| ||||||||| Sbjct: 315 tgcgccgcctgcggctgccaccggagcttccac 347 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 206 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 265 Query: 294 c 294 | Sbjct: 266 c 266
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 1179562 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 1179621 Query: 294 cggggagtacatg 306 | |||||| |||| Sbjct: 1179622 ccgggagttcatg 1179634 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 335 ccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||| ||||||| |||||||||| Sbjct: 5674758 ccgcctgcggctgccaccgcaacttccaccgc 5674789 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| |||| ||||||||| Sbjct: 1179671 tgcgccgcctgcggctgccaccagagcttccac 1179703
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Minus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 113220 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 113161 Query: 294 cggggagtacatg 306 | |||||| |||| Sbjct: 113160 ccgggagttcatg 113148 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| |||| ||||||||| Sbjct: 113111 tgcgccgcctgcggctgccaccagagcttccac 113079
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 234 gtacaaggagtgcatgcgcaaccacgcggctgccatgggcggccaggccttcgacggctg 293 ||||| ||||||| |||||||||||| || ||| |||||||| ||| |||||||||| Sbjct: 118545 gtacagggagtgccagcgcaaccacgccgccagcatcggcggccacgccgtcgacggctg 118604 Query: 294 cggggagtacatg 306 | |||||| |||| Sbjct: 118605 ccgggagttcatg 118617 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccac 363 ||||||||||||||||| |||| ||||||||| Sbjct: 118654 tgcgccgcctgcggctgccaccagagcttccac 118686
>ref|XM_482974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1891 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||| ||||| | |||||||||| Sbjct: 388 tgcgccgcctgcggctgccaccgtaacttccaccgc 423
>ref|XM_450932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Plus Query: 253 aaccacgcggctgccatgggcggccaggccttcgacggctgcggggagtacatgccggcc 312 |||||||||| || ||| |||||||| ||| | ||||||||||| |||| |||| ||||| Sbjct: 257 aaccacgcggttggcatcggcggccacgccgtggacggctgcggcgagttcatggcggcc 316
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||| ||||| | |||||||||| Sbjct: 65349 tgcgccgcctgcggctgccaccgtaacttccaccgc 65314
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 253 aaccacgcggctgccatgggcggccaggccttcgacggctgcggggagtacatgccggcc 312 |||||||||| || ||| |||||||| ||| | ||||||||||| |||| |||| ||||| Sbjct: 99060 aaccacgcggttggcatcggcggccacgccgtggacggctgcggcgagttcatggcggcc 99001
>dbj|AK109528.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C04, full insert sequence Length = 1891 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||||||| ||||| | |||||||||| Sbjct: 388 tgcgccgcctgcggctgccaccgtaacttccaccgc 423
>dbj|AK108246.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-H06, full insert sequence Length = 1169 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Plus Query: 253 aaccacgcggctgccatgggcggccaggccttcgacggctgcggggagtacatgccggcc 312 |||||||||| || ||| |||||||| ||| | ||||||||||| |||| |||| ||||| Sbjct: 257 aaccacgcggttggcatcggcggccacgccgtggacggctgcggcgagttcatggcggcc 316
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 335 ccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||||||||| ||||||| |||||||||| Sbjct: 29288 ccgcctgcggctgccaccgcaacttccaccgc 29319
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 325 ctcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 ||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 9578 ctcaaatgcgccgcctgcggttgccaccgtaacttccaccgccg 9621 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccg 365 ||||||||||| ||||| |||||||| |||||||| Sbjct: 17984 tgcgccgcctgtggctgccaccgcagtttccaccg 17950 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 253 aaccacgcggctgccatgggcggccaggccttcgacggctgcggggagtacatgccg 309 ||||||||||| || || ||||| || || ||||||| |||||||||| ||||||| Sbjct: 9488 aaccacgcggcagcgattggcggtcacgcactcgacggttgcggggagttcatgccg 9544
>emb|Y18581.1|FBI18581 Flaveria bidentis partial mRNA for ZF-HD homeobox protein (hb4 gene), clone FbHB4 Length = 968 Score = 46.1 bits (23), Expect = 0.087 Identities = 38/43 (88%) Strand = Plus / Plus Query: 326 tcaagtgcgccgcctgcggctgtcaccgcagcttccaccgccg 368 |||| ||||| ||||||||||| ||||| | |||||||||||| Sbjct: 45 tcaaatgcgctgcctgcggctgccaccgtaacttccaccgccg 87
>gb|AY695729.1| Glycine max zinc finger homeodomain protein SZF-HD1 mRNA, complete cds Length = 771 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 329 agtgcgccgcctgcggctgtcaccgcagcttccaccgc 366 ||||||| ||||||||||| || |||| |||||||||| Sbjct: 194 agtgcgcagcctgcggctgccatcgcaacttccaccgc 231
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 aaagccttctcttgcttcttct 64 |||||||||||||||||||||| Sbjct: 54360 aaagccttctcttgcttcttct 54339
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 gctgccatgggcggccaggcct 283 |||||||||||||||||||||| Sbjct: 318037 gctgccatgggcggccaggcct 318058
>gb|AY129334.1| Mycobacteriophage Rosebush, complete genome Length = 67480 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 tgggcggccaggccttcgacgg 290 |||||||||||||||||||||| Sbjct: 6240 tgggcggccaggccttcgacgg 6261
>ref|XM_223786.3| PREDICTED: Rattus norvegicus zinc finger protein 503 (predicted) (Zfp503_predicted), mRNA Length = 4210 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 aggcagcggagccgggggcgac 222 |||||||||||||||||||||| Sbjct: 1784 aggcagcggagccgggggcgac 1805
>emb|Z95151.1|MLCB5 Mycobacterium leprae cosmid B5 Length = 38109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gcctgcggctgtcaccgcagc 357 ||||||||||||||||||||| Sbjct: 997 gcctgcggctgtcaccgcagc 977
>emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete genome; segment 8/10 Length = 342300 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gcctgcggctgtcaccgcagc 357 ||||||||||||||||||||| Sbjct: 309845 gcctgcggctgtcaccgcagc 309865
>gb|U15187.1|MLU15187 Mycobacterium leprae cosmid L296 Length = 36138 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gcctgcggctgtcaccgcagc 357 ||||||||||||||||||||| Sbjct: 8267 gcctgcggctgtcaccgcagc 8287
>dbj|AK030967.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830471O09 product:unclassifiable, full insert sequence Length = 2752 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 aaggagtgcatgcgcaaccac 258 ||||||||||||||||||||| Sbjct: 131 aaggagtgcatgcgcaaccac 151
>dbj|AP001077.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-767P20, complete sequence Length = 199652 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggatcacctgagcctggtgcc 191 ||||||||||||||||||||| Sbjct: 80771 ggatcacctgagcctggtgcc 80791
>dbj|AP005482.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-973H7, complete sequence Length = 170560 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggatcacctgagcctggtgcc 191 ||||||||||||||||||||| Sbjct: 130249 ggatcacctgagcctggtgcc 130269
>ref|NM_125939.2| Arabidopsis thaliana transcription factor AT5G65410 mRNA, complete cds Length = 1090 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 |||||||| || ||||||||||| | |||||||||| Sbjct: 416 tgcgccgcttgtggctgtcaccgtaacttccaccgc 451
>ref|NM_188926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcagcttccaccgccgcgcg 372 |||||||||||||||||||| Sbjct: 34 gcagcttccaccgccgcgcg 15
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggcagcggagccggggg 218 |||||||||||||||||||| Sbjct: 153591 ggaggcagcggagccggggg 153572
>ref|XM_425147.1| PREDICTED: Gallus gallus similar to PHD finger protein 7 (LOC427574), mRNA Length = 2787 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggctgtcaccgcagcttcca 362 |||||||||||||||||||| Sbjct: 1870 ggctgtcaccgcagcttcca 1889
>ref|XM_414278.1| PREDICTED: Gallus gallus similar to PHD finger protein 7 isoform 1 (LOC415934), mRNA Length = 7719 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggctgtcaccgcagcttcca 362 |||||||||||||||||||| Sbjct: 4114 ggctgtcaccgcagcttcca 4133
>ref|XM_414267.1| PREDICTED: Gallus gallus similar to ring finger protein 123 (LOC415923), mRNA Length = 7740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggctgtcaccgcagcttcca 362 |||||||||||||||||||| Sbjct: 1477 ggctgtcaccgcagcttcca 1496
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcacctgagcctggtgccct 193 |||||||||||||||||||| Sbjct: 4224618 tcacctgagcctggtgccct 4224599
>emb|AL160286.16| Human DNA sequence from clone RP11-545A16 on chromosome 1q25.1-31.1 Contains the 3' end of a novel gene, a novel gene, the NPHS2 gene for idiopathic steroid-resistant nephrosis 2 protein (podocin), a centaurin gamma 2 (CENTG2) pseudogene and the 5' end of a novel gene, complete sequence Length = 155416 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gatggatcacctgagcctgg 187 |||||||||||||||||||| Sbjct: 22564 gatggatcacctgagcctgg 22583
>emb|Z25774.2|LDMOFA Leptothrix discophora mof operon and flanking genes Length = 9413 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 gcggctgccatgggcggccaggcc 282 ||||||||||| |||||||||||| Sbjct: 7662 gcggctgccatcggcggccaggcc 7639
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aggccttcgacggctgcggg 297 |||||||||||||||||||| Sbjct: 212115 aggccttcgacggctgcggg 212134
>gb|AC091271.8| Homo sapiens chromosome 17, clone RP11-758H9, complete sequence Length = 135784 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gatggatcacctgagcctgg 187 |||||||||||||||||||| Sbjct: 84610 gatggatcacctgagcctgg 84591
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggcggccaggccttcgacgg 290 |||||||||||||||||||| Sbjct: 2248381 ggcggccaggccttcgacgg 2248400
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ggaggcagcggagccggggg 218 |||||||||||||||||||| Sbjct: 127124 ggaggcagcggagccggggg 127143
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ggaggcagcggagccggggg 218 |||||||||||||||||||| Sbjct: 127124 ggaggcagcggagccggggg 127143
>gb|BT006304.1| Arabidopsis thaliana At5g65410 mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 |||||||| || ||||||||||| | |||||||||| Sbjct: 331 tgcgccgcttgtggctgtcaccgtaacttccaccgc 366
>gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183354 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcacctgagcctggtgccct 193 |||||||||||||||||||| Sbjct: 104396 tcacctgagcctggtgccct 104377
>gb|AC125605.4| Homo sapiens 12 BAC RP11-251H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 45834 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gatggatcacctgagcctgg 187 |||||||||||||||||||| Sbjct: 34484 gatggatcacctgagcctgg 34503
>gb|BT002385.1| Arabidopsis thaliana putative protein (At5g65410) mRNA, complete cds Length = 1090 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 |||||||| || ||||||||||| | |||||||||| Sbjct: 416 tgcgccgcttgtggctgtcaccgtaacttccaccgc 451
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcagcttccaccgccgcgcg 372 |||||||||||||||||||| Sbjct: 55999 gcagcttccaccgccgcgcg 56018
>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Length = 88356 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 tgcgccgcctgcggctgtcaccgcagcttccaccgc 366 |||||||| || ||||||||||| | |||||||||| Sbjct: 48408 tgcgccgcttgtggctgtcaccgtaacttccaccgc 48443
>gb|AF090926.1|AF090926 Homo sapiens clone HQ0456 PRO0456 mRNA, complete cds Length = 1784 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gatggatcacctgagcctgg 187 |||||||||||||||||||| Sbjct: 1672 gatggatcacctgagcctgg 1691
>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 226035 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gatggatcacctgagcctgg 187 |||||||||||||||||||| Sbjct: 98115 gatggatcacctgagcctgg 98134 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,328,436 Number of Sequences: 3902068 Number of extensions: 2328436 Number of successful extensions: 65974 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65352 Number of HSP's gapped (non-prelim): 619 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
