| Clone Name | bast61g05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VACHT_RAT (Q62666) Vesicular acetylcholine transporter (VAChT) (... | 28 | 4.1 | 2 | VACHT_MOUSE (O35304) Vesicular acetylcholine transporter (VAChT)... | 28 | 5.4 | 3 | SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP... | 27 | 9.2 |
|---|
>VACHT_RAT (Q62666) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) (rVAT) Length = 530 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 121 VRRTWRPTCGAPSLA--VAYLATSSAPLKG*IGAAAMMRPR 237 V W PT P+LA AYLA +SA A +++RPR Sbjct: 74 VSEVWEPTLPPPTLANASAYLANTSASPTAAGSARSILRPR 114
>VACHT_MOUSE (O35304) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) Length = 530 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 121 VRRTWRPTCGAPSLA--VAYLATSSAPLKG*IGAAAMMRPR 237 + W PT P+LA AYLA +SA A +++RPR Sbjct: 74 ISEVWEPTLPPPTLANASAYLANTSASPTAAGSARSILRPR 114
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 210 DSALQRRGAGG*VGNGERWSATSGA-PRSAH 121 DS RGAGG G G+ S T A PR AH Sbjct: 16 DSHTSSRGAGGGGGGGDPRSPTKAASPRGAH 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,794,220 Number of Sequences: 219361 Number of extensions: 427594 Number of successful extensions: 1039 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1013 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1039 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)