| Clone Name | bast61g03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197190.1| Oryza sativa (japonica cultivar-group) putative microtubule-associated protein (OSJNBa0078O01.4), mRNA Length = 1366 Score = 107 bits (54), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 112 ggagatgtcggtcagcaacatagggatgatggacggcgcctacttcgtggggcggaacga 171 ||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 111 ggagatggcggcgagcaacatcgggatgatggacggggcctacttcgtggggcggaacga 170 Query: 172 gatcctcgcctggatc-acaccacgctgcagctc 204 |||||| || |||||| ||||||| ||||||||| Sbjct: 171 gatcctggcgtggatcaacaccaccctgcagctc 204
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 107 bits (54), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 112 ggagatgtcggtcagcaacatagggatgatggacggcgcctacttcgtggggcggaacga 171 ||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 23225 ggagatggcggcgagcaacatcgggatgatggacggggcctacttcgtggggcggaacga 23166 Query: 172 gatcctcgcctggatc-acaccacgctgcagctc 204 |||||| || |||||| ||||||| ||||||||| Sbjct: 23165 gatcctggcgtggatcaacaccaccctgcagctc 23132
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 107 bits (54), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 112 ggagatgtcggtcagcaacatagggatgatggacggcgcctacttcgtggggcggaacga 171 ||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 18520214 ggagatggcggcgagcaacatcgggatgatggacggggcctacttcgtggggcggaacga 18520155 Query: 172 gatcctcgcctggatc-acaccacgctgcagctc 204 |||||| || |||||| ||||||| ||||||||| Sbjct: 18520154 gatcctggcgtggatcaacaccaccctgcagctc 18520121
>dbj|AK108732.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D04, full insert sequence Length = 1359 Score = 107 bits (54), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 112 ggagatgtcggtcagcaacatagggatgatggacggcgcctacttcgtggggcggaacga 171 ||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 127 ggagatggcggcgagcaacatcgggatgatggacggggcctacttcgtggggcggaacga 186 Query: 172 gatcctcgcctggatc-acaccacgctgcagctc 204 |||||| || |||||| ||||||| ||||||||| Sbjct: 187 gatcctggcgtggatcaacaccaccctgcagctc 220
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 107 bits (54), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 112 ggagatgtcggtcagcaacatagggatgatggacggcgcctacttcgtggggcggaacga 171 ||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 18530267 ggagatggcggcgagcaacatcgggatgatggacggggcctacttcgtggggcggaacga 18530208 Query: 172 gatcctcgcctggatc-acaccacgctgcagctc 204 |||||| || |||||| ||||||| ||||||||| Sbjct: 18530207 gatcctggcgtggatcaacaccaccctgcagctc 18530174
>gb|AY104111.1| Zea mays PCO120399 mRNA sequence Length = 1266 Score = 97.6 bits (49), Expect = 1e-17 Identities = 74/81 (91%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 125 agcaacatagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctgg 184 |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||| ||| Sbjct: 112 agcaacatcgggatgatggacggagcctacttcgtcgggcgcaacgagatcctcgcgtgg 171 Query: 185 atc-acaccacgctgcagctc 204 ||| |||| |||||||||||| Sbjct: 172 atcaacactacgctgcagctc 192
>ref|XM_474072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 27 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 85
>gb|AY020489.1| Oryza sativa microsatellite MRG2814 containing (GA)X20, closest to marker RG169, genomic sequence Length = 240 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 179 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 237
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 78045 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 78103
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 113631 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 113689
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 32718610 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 32718668
>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full insert sequence Length = 2535 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 1437 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 1495
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 46.1 bits (23), Expect = 0.042 Identities = 50/59 (84%) Strand = Plus / Plus Query: 130 catagggatgatggacggcgcctacttcgtggggcggaacgagatcctcgcctggatca 188 |||||||||||||||| |||| |||||||| ||| || ||||||||| |||||||| Sbjct: 50911 catagggatgatggacagcgcgtacttcgtcgggaggggggagatcctcagctggatca 50969
>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence Length = 211411 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 cctccgccccccacctcctcct 58 |||||||||||||||||||||| Sbjct: 63633 cctccgccccccacctcctcct 63612
>gb|AY111012.1| Zea mays CL15444_1 mRNA sequence Length = 1036 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 gggatgatggacggcgcctacttcgt 159 ||||| |||||||||||||||||||| Sbjct: 983 gggatcatggacggcgcctacttcgt 958
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 103530 ccgctcctccgccgcccacctcctc 103506 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 69465 ccgctcctccgccacccacctcctc 69441
>gb|AC151794.1| Ornithorhynchus anatinus chromosome UNK clone OABb-58A1, complete sequence Length = 148132 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 17581 ccgctcctccgccgcccacctcctc 17557
>gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OABb-208A1, complete sequence Length = 145600 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 45615 ccgctcctccgccgcccacctcctc 45591 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 19728 ccgctcctccgccgcccacctcctc 19752
>gb|AC151778.1| Ornithorhynchus anatinus chromosome UNK clone OABb-238A1, complete sequence Length = 168798 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 123176 ccgctcctccgccgcccacctcctc 123200
>gb|AC151775.1| Ornithorhynchus anatinus chromosome UNK clone OABb-307A1, complete sequence Length = 195598 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 3994 ccgctcctccgccgcccacctcctc 4018
>gb|AC151765.1| Ornithorhynchus anatinus chromosome UNK clone OABb-423A1, complete sequence Length = 154417 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 95033 ccgctcctccgccgcccacctcctc 95009
>gb|AC151748.1| Ornithorhynchus anatinus chromosome UNK clone OABb-532A1, complete sequence Length = 114806 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 55903 ccgctcctccgccgcccacctcctc 55927
>gb|AC152563.1| Ornithorhynchus anatinus chromosome UNK clone OABb-291A1, complete sequence Length = 169955 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 65696 ccgctcctccgccgcccacctcctc 65672
>gb|AC151757.1| Ornithorhynchus anatinus chromosome UNK clone OABb-457P24, complete sequence Length = 135835 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 108595 ccgctcctccgccgcccacctcctc 108571 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 106185 ccgctcctccgccacccacctcctc 106209
>gb|AC186172.1| Ornithorhynchus anatinus chromosome UNK clone OABb-43A1, complete sequence Length = 180865 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 21639 ccgctcctccgccgcccacctcctc 21663 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 17286 ccgctcctccgccgcccacctcctc 17310
>gb|AC186168.1| Ornithorhynchus anatinus chromosome UNK clone OABb-35C10, complete sequence Length = 133373 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 114091 ccgctcctccgccgcccacctcctc 114067
>gb|AC186150.1| Ornithorhynchus anatinus chromosome UNK clone OABb-264K6, complete sequence Length = 149168 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 134618 ccgctcctccgccgcccacctcctc 134642
>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence Length = 149919 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 139522 ccgctcctccgccgcccacctcctc 139546
>emb|BX936280.10| Platypus DNA sequence from clone XX-452D13, complete sequence Length = 122600 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 78591 ccgctcctccgccgcccacctcctc 78615
>emb|BX936288.8| Platypus DNA sequence from clone XX-534O22, complete sequence Length = 153564 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 13089 ccgctcctccgccgcccacctcctc 13113
>emb|CR855278.2| Platypus DNA sequence from clone XX-235F6, complete sequence Length = 140510 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 48364 ccgctcctccgccgcccacctcctc 48388 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 39354 ccgctcctccgccgcccacctcctc 39378
>emb|Y09666.1|BJY09666 B.japonicum ragA, ragB and rpoH3 genes Length = 4015 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 gggcggaacgagatcctcgcctgga 185 ||||||| ||||||||||||||||| Sbjct: 2908 gggcggatcgagatcctcgcctgga 2932
>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown, complete sequence Length = 141309 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 11108 ccgctcctccgccgcccacctcctc 11084 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 2994 ccgctcctccgccgcccacctcctc 2970
>gb|AC157604.2| Ornithorhynchus anatinus chromosome UNK clone OABb-185A1, complete sequence Length = 136586 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 72831 ccgctcctccgccgcccacctcctc 72855
>gb|AC144754.3| Ornithorhynchus anatinus clone OA_Bb-265C11, complete sequence Length = 68227 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 50450 ccgctcctccgccgcccacctcctc 50474
>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence Length = 116899 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 33486 ccgctcctccgccgcccacctcctc 33462
>gb|AC144363.3| Ornithorhynchus anatinus clone OA_Bb-161L8, complete sequence Length = 102659 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 35898 ccgctcctccgccgcccacctcctc 35874
>gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, complete sequence Length = 144677 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 54155 ccgctcctccgccgcccacctcctc 54179
>gb|AC129883.3| Ornithorhynchus anatinus clone OA_Bb-305F19, complete sequence Length = 181157 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 144268 ccgctcctccgccgcccacctcctc 144292 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 75293 ccgctcctccgccgcccacctcctc 75269
>gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, complete sequence Length = 161148 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 32588 ccgctcctccgccgcccacctcctc 32564
>gb|AC175465.1| Ornithorhynchus anatinus BAC clone OABb-36D11 from chromosome unknown, complete sequence Length = 128273 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 63839 ccgctcctccgccgcccacctcctc 63815
>gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OABb-263A1, complete sequence Length = 150582 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 67939 ccgctcctccgccgcccacctcctc 67963 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 27691 ccgctcctccgccgcccacctcctc 27715
>gb|AC152942.2| Ornithorhynchus anatinus chromosome UNK clone OABb-193A1, complete sequence Length = 139887 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 86756 ccgctcctccgccgcccacctcctc 86780
>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete sequence Length = 142317 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 14587 ccgctcctccgccgcccacctcctc 14563
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 gggcggaacgagatcctcgcctgga 185 ||||||| ||||||||||||||||| Sbjct: 313081 gggcggatcgagatcctcgcctgga 313057 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ggacgccggagatgtcggtcagca 128 ||||||||| |||||||||||||| Sbjct: 6239072 ggacgccggcgatgtcggtcagca 6239049
>gb|AC164973.4| Ornithorhynchus anatinus BAC clone OABb-265H16 from chromosome unknown, complete sequence Length = 129291 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 2816 ccgctcctccgccgcccacctcctc 2792
>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown, complete sequence Length = 128941 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 50115 ccgctcctccgccgcccacctcctc 50091
>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence Length = 137155 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 96082 ccgctcctccgccgcccacctcctc 96106
>gb|AC152002.2| Ornithorhynchus anatinus chromosome UNK clone OABb-387A1, complete sequence Length = 131214 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 ccgctcctccgccccccacctcctc 56 ||||||||||||| ||||||||||| Sbjct: 93969 ccgctcctccgccgcccacctcctc 93945
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gtctccggcggcggagaagc 98 |||||||||||||||||||| Sbjct: 115547 gtctccggcggcggagaagc 115566
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcggaacgagatcctcgcct 182 |||||||||||||||||||| Sbjct: 673233 gcggaacgagatcctcgcct 673252
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence Length = 131580 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ctcctccgccccccacctcctcct 58 ||||||| |||||||||||||||| Sbjct: 36227 ctcctcctccccccacctcctcct 36204
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gtctccggcggcggagaagc 98 |||||||||||||||||||| Sbjct: 15221801 gtctccggcggcggagaagc 15221782
>gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome 14, complete sequence Length = 237561 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ctccgccccccacctcctcc 57 |||||||||||||||||||| Sbjct: 121117 ctccgccccccacctcctcc 121098
>ref|XM_811538.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505807.200) partial mRNA Length = 1695 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgcggttccggtctccggcg 88 |||||||||||||||||||| Sbjct: 750 cgcggttccggtctccggcg 769
>gb|BC008018.1| Homo sapiens diacylglycerol kinase, zeta 104kDa, mRNA (cDNA clone IMAGE:3534542), partial cds Length = 1778 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 1510 ccccagcccccgctcctgccccaccccacctcctcc 1545
>gb|BC041770.1| Homo sapiens diacylglycerol kinase, zeta 104kDa, transcript variant 2, mRNA (cDNA clone MGC:26405 IMAGE:4811463), complete cds Length = 3488 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3249 ccccagcccccgctcctgccccaccccacctcctcc 3284
>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence Length = 167757 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 146839 ccccagcccccgctcctgccccaccccacctcctcc 146874
>dbj|AK124693.1| Homo sapiens cDNA FLJ42703 fis, clone BRAMY3005932, moderately similar to Diacylglycerol kinase, zeta (EC 2.7.1.107) Length = 3679 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3456 ccccagcccccgctcctgccccaccccacctcctcc 3491
>dbj|AK124594.1| Homo sapiens cDNA FLJ42603 fis, clone BRACE3011421, highly similar to Diacylglycerol kinase, zeta (EC 2.7.1.107) Length = 3813 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3590 ccccagcccccgctcctgccccaccccacctcctcc 3625
>dbj|AK126970.1| Homo sapiens cDNA FLJ45023 fis, clone BRAWH3017180, highly similar to Diacylglycerol kinase, zeta (EC 2.7.1.107) Length = 3531 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3306 ccccagcccccgctcctgccccaccccacctcctcc 3341
>dbj|AK097960.1| Homo sapiens cDNA FLJ40641 fis, clone THYMU2016968, highly similar to DIACYLGLYCEROL KINASE, ZETA (EC 2.7.1.107) Length = 1999 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 1776 ccccagcccccgctcctgccccaccccacctcctcc 1811
>ref|NM_201532.1| Homo sapiens diacylglycerol kinase, zeta 104kDa (DGKZ), transcript variant 1, mRNA Length = 3551 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3306 ccccagcccccgctcctgccccaccccacctcctcc 3341
>ref|NM_003646.2| Homo sapiens diacylglycerol kinase, zeta 104kDa (DGKZ), transcript variant 2, mRNA Length = 3607 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3362 ccccagcccccgctcctgccccaccccacctcctcc 3397
>ref|NM_201533.1| Homo sapiens diacylglycerol kinase, zeta 104kDa (DGKZ), transcript variant 3, mRNA Length = 3404 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3159 ccccagcccccgctcctgccccaccccacctcctcc 3194
>emb|CR389839.1| Gallus gallus finished cDNA, clone ChEST271o1 Length = 883 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cctccgccccccacctcctc 56 |||||||||||||||||||| Sbjct: 37 cctccgccccccacctcctc 18
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ggtcagcaacatagggatga 140 |||||||||||||||||||| Sbjct: 689323 ggtcagcaacatagggatga 689304
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 86 gcggcggagaagcaagggaggacgccgg 113 ||||||||||||||| ||| |||||||| Sbjct: 88266 gcggcggagaagcaacggacgacgccgg 88293
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gtctccggcggcggagaagc 98 |||||||||||||||||||| Sbjct: 15216335 gtctccggcggcggagaagc 15216316
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ctcctccgccccccacctcctcct 58 ||||||| |||||||||||||||| Sbjct: 124227 ctcctcctccccccacctcctcct 124204
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cagcccccgctcctccgccc 45 |||||||||||||||||||| Sbjct: 6218890 cagcccccgctcctccgccc 6218871
>dbj|AP006059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0023E08 Length = 127560 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 86 gcggcggagaagcaagggaggacgccgg 113 ||||||||||||||| ||| |||||||| Sbjct: 88266 gcggcggagaagcaacggacgacgccgg 88293
>emb|BX648433.1|HSM808581 Homo sapiens mRNA; cDNA DKFZp686G19253 (from clone DKFZp686G19253) Length = 3534 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3287 ccccagcccccgctcctgccccaccccacctcctcc 3322
>emb|BX649190.1|HSM806906 Homo sapiens mRNA; cDNA DKFZp686J21237 (from clone DKFZp686J21237) Length = 1737 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 1504 ccccagcccccgctcctgccccaccccacctcctcc 1539
>dbj|AK106316.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E01, full insert sequence Length = 1513 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gtctccggcggcggagaagc 98 |||||||||||||||||||| Sbjct: 855 gtctccggcggcggagaagc 836
>gb|U51477.1|HSU51477 Human diacylglycerol kinase zeta mRNA, complete cds Length = 3490 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3256 ccccagcccccgctcctgccccaccccacctcctcc 3291
>gb|U94905.1|HSU94905 Human diacylglycerol kinase zeta mRNA, alternatively spliced, complete cds Length = 4094 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 3860 ccccagcccccgctcctgccccaccccacctcctcc 3895
>dbj|AB209635.1| Homo sapiens mRNA for diacylglycerol kinase, zeta 104kDa isoform 3 variant protein Length = 5735 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 5510 ccccagcccccgctcctgccccaccccacctcctcc 5545
>dbj|D10604.1|HUMMK Human midkine gene, complete cds Length = 4638 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 23 ccccagcccccgctcct-ccgccccccacctcctcc 57 ||||||||||||||||| || | ||||||||||||| Sbjct: 907 ccccagcccccgctcctgccccaccccacctcctcc 942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,448,815 Number of Sequences: 3902068 Number of extensions: 1448815 Number of successful extensions: 107620 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 106585 Number of HSP's gapped (non-prelim): 1032 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)