>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 51       atggcggtcggcatcgcgctcctgctcgacct 82
                |||||||||||||||||||| |||||||||||
Sbjct: 18984544 atggcggtcggcatcgcgctgctgctcgacct 18984513



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 55      cggtcggcatcgcgctcctgctcgacct 82
               |||||||||||||||| |||||||||||
Sbjct: 4301488 cggtcggcatcgcgctactgctcgacct 4301515

>dbj|AK067767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119P15, full
           insert sequence
          Length = 1352

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 51  atggcggtcggcatcgcgctcctgctcgacct 82
           |||||||||||||||||||| |||||||||||
Sbjct: 138 atggcggtcggcatcgcgctgctgctcgacct 169

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 51       atggcggtcggcatcgcgctcctgctcgacct 82
                |||||||||||||||||||| |||||||||||
Sbjct: 18910771 atggcggtcggcatcgcgctgctgctcgacct 18910740



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 55      cggtcggcatcgcgctcctgctcgacct 82
               |||||||||||||||| |||||||||||
Sbjct: 4301475 cggtcggcatcgcgctactgctcgacct 4301502

>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 51    atggcggtcggcatcgcgctcctgctcgacct 82
             |||||||||||||||||||| |||||||||||
Sbjct: 80661 atggcggtcggcatcgcgctgctgctcgacct 80630

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 52       tggcggtcggcatcgcgctcctgctcgacct 82
                ||||||||||||||||||| |||||||||||
Sbjct: 11188898 tggcggtcggcatcgcgctgctgctcgacct 11188868

>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042H24
          Length = 186313

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 52    tggcggtcggcatcgcgctcctgctcgacct 82
             ||||||||||||||||||| |||||||||||
Sbjct: 24070 tggcggtcggcatcgcgctgctgctcgacct 24040

>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0004P20
          Length = 160410

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 52     tggcggtcggcatcgcgctcctgctcgacct 82
              ||||||||||||||||||| |||||||||||
Sbjct: 147705 tggcggtcggcatcgcgctgctgctcgacct 147675

>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178147

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 55     cggtcggcatcgcgctcctgctcgacct 82
              |||||||||||||||| |||||||||||
Sbjct: 150223 cggtcggcatcgcgctactgctcgacct 150196

>gb|AY107689.1| Zea mays PCO122240 mRNA sequence
          Length = 630

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 189 ctctccgcgcggcccttctccggttttgcaggattcactgttgctcattgtgatgctgg 247
           ||||||||||| | | ||| |||||||   || || |||||||||||||||||||||||
Sbjct: 215 ctctccgcgcgccacctcttcggttttcatgggtttactgttgctcattgtgatgctgg 273

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 57      gtcggcatcgcgctcctgctcg 78
               ||||||||||||||||||||||
Sbjct: 3118127 gtcggcatcgcgctcctgctcg 3118148

>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 70     tcctgctcgacctggcggcccg 91
              ||||||||||||||||||||||
Sbjct: 608482 tcctgctcgacctggcggcccg 608461

>gb|AE008709.1| Salmonella typhimurium LT2, section 17 of 220 of the complete genome
          Length = 22035

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 49    ccatggcggtcggcatcgcgct 70
             ||||||||||||||||||||||
Sbjct: 11246 ccatggcggtcggcatcgcgct 11225

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 57      gtcggcatcgcgctcctgctcg 78
               ||||||||||||||||||||||
Sbjct: 1296917 gtcggcatcgcgctcctgctcg 1296938

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 57      gtcggcatcgcgctcctgctcg 78
               ||||||||||||||||||||||
Sbjct: 1338492 gtcggcatcgcgctcctgctcg 1338471

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 49      ccatggcggtcggcatcgcgct 70
               ||||||||||||||||||||||
Sbjct: 2538491 ccatggcggtcggcatcgcgct 2538512

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 49     ccatggcggtcggcatcgcgct 70
              ||||||||||||||||||||||
Sbjct: 361938 ccatggcggtcggcatcgcgct 361917

>ref|NM_197738.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0042H09.9), mRNA
          Length = 1150

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  ccgcgcccatggcggtcggca 63
           |||||||||||||||||||||
Sbjct: 332 ccgcgcccatggcggtcggca 352

>ref|XM_391464.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein
            (FG11288.1) partial mRNA
          Length = 2484

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 263  gaatgatagccctgatcttgt 283
            |||||||||||||||||||||
Sbjct: 2298 gaatgatagccctgatcttgt 2318

>gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 166696

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    tgatgctggttcaacttatgg 259
              |||||||||||||||||||||
Sbjct: 147523 tgatgctggttcaacttatgg 147543

>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    ccgcgcccatggcggtcggca 63
             |||||||||||||||||||||
Sbjct: 57755 ccgcgcccatggcggtcggca 57775

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 43       ccgcgcccatggcggtcggca 63
                |||||||||||||||||||||
Sbjct: 21552302 ccgcgcccatggcggtcggca 21552282

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     tcgcgctcctgctcgacctgg 84
              |||||||||||||||||||||
Sbjct: 672886 tcgcgctcctgctcgacctgg 672906

>gb|AF177379.1| Cynodon dactylon acidic Cyn d 1 isoallergen isoform 3 precursor,
           mRNA, complete cds
          Length = 789

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 tcttgtcagtgatcttaatga 298
           |||||||||||||||||||||
Sbjct: 343 tcttgtcagtgatcttaatga 323

>dbj|AK109732.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C03, full
           insert sequence
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  ccgcgcccatggcggtcggca 63
           |||||||||||||||||||||
Sbjct: 570 ccgcgcccatggcggtcggca 590

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 43       ccgcgcccatggcggtcggca 63
                |||||||||||||||||||||
Sbjct: 21563965 ccgcgcccatggcggtcggca 21563945

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 43      ccgcgcccatggcggtcggc 62
               ||||||||||||||||||||
Sbjct: 1928769 ccgcgcccatggcggtcggc 1928788



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ccgcgcccatggcggtcggc 62
              ||||||||||||||||||||
Sbjct: 970257 ccgcgcccatggcggtcggc 970238

>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     ccatggcggtcggcatcgcg 68
              ||||||||||||||||||||
Sbjct: 388535 ccatggcggtcggcatcgcg 388516

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     gacctggcggcccgcgcgcc 97
              ||||||||||||||||||||
Sbjct: 786973 gacctggcggcccgcgcgcc 786954

>ref|XM_842954.1| Leishmania major strain Friedlin isovaleryl-coA dehydrogenase
           (LMJ_0350) partial mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  ccatggcggtcggcatcgcg 68
           ||||||||||||||||||||
Sbjct: 827 ccatggcggtcggcatcgcg 846

>ref|XM_386201.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06025.1)
           partial mRNA
          Length = 1977

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  gcatcgcgctcctgctcgac 80
           ||||||||||||||||||||
Sbjct: 653 gcatcgcgctcctgctcgac 634

>gb|AY029400.1| Campoletis sonorensis ichnovirus segment Z, complete sequence
          Length = 19557

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gtgatgctggttcaacttat 257
             ||||||||||||||||||||
Sbjct: 13155 gtgatgctggttcaacttat 13136

>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    cgacctggcggcccgcgcgcccca 100
             |||||||| |||||||||||||||
Sbjct: 11041 cgacctggtggcccgcgcgcccca 11064

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     tcggcatcgcgctcctgctcgacc 81
              |||||||||||| |||||||||||
Sbjct: 223162 tcggcatcgcgcacctgctcgacc 223185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,257,839
Number of Sequences: 3902068
Number of extensions: 1257839
Number of successful extensions: 26020
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25509
Number of HSP's gapped (non-prelim): 507
length of query: 308
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 286
effective length of database: 17,147,199,772
effective search space: 4904099134792
effective search space used: 4904099134792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)