ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61f11 |
|---|---|
| Clone Library Name | barley_pub |
>PTSP_BOMMO (P82003) Prothoracicostatic peptide precursor (Bom-PTSP)| Length = 274 Score = 41.2 bits (95), Expect = 0.001 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW 391 + ++S W + GW+ ++S W + W+ + S W + GW+ ++S W Sbjct: 70 QDLNSAWGKRGWQDLNSAWGKRAWQDLNSAWGKRGWQDLNSAW 112 Score = 39.7 bits (91), Expect = 0.003 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 397 + ++S W + W+ ++S W + GW + S W + W+ ++S W WQ Sbjct: 139 QDLNSAWGKRAWQDLNSAWGKRGWNDISSVWGKRAWQDLNSAWGKRAWQ 187 Score = 39.7 bits (91), Expect = 0.003 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = +2 Query: 269 IHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 397 +HS W + W+ + S W + W+ + S W + GW+ ++S W WQ Sbjct: 48 LHSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQDLNSAWGKRAWQ 94 Score = 38.9 bits (89), Expect = 0.005 Identities = 13/48 (27%), Positives = 25/48 (52%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRWWQARP 406 + ++S W + GW + S W + W+ + S W + W+ + S W + P Sbjct: 151 QDLNSAWGKRGWNDISSVWGKRAWQDLNSAWGKRAWQDMSSAWGKRAP 198 Score = 38.1 bits (87), Expect = 0.009 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 397 + + S W + W+ ++S W + GW+ + S W + W+ ++S W WQ Sbjct: 58 QDMSSAWGKRAWQDLNSAWGKRGWQDLNSAWGKRAWQDLNSAWGKRGWQ 106 Score = 37.4 bits (85), Expect = 0.016 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 397 + ++S W + W+ ++S W + W+ + S W + GW I S W WQ Sbjct: 127 QDLNSVWGKRAWQDLNSAWGKRAWQDLNSAWGKRGWNDISSVWGKRAWQ 175 Score = 34.3 bits (77), Expect = 0.13 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +2 Query: 296 WKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 397 W +HS W + W+ + S W + W+ ++S W WQ Sbjct: 45 WSSLHSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQ 82 Score = 32.0 bits (71), Expect = 0.67 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 21/64 (32%) Frame = +2 Query: 263 EQIHSRWWQDGWKRVHSWW-------------WQD--------GWKRVCSRWWQDGWKRI 379 + ++S W + GW+ ++S W WQD W+ + S W + W+ + Sbjct: 94 QDLNSAWGKRGWQDLNSAWGKRDDDEAMEKKSWQDLNSVWGKRAWQDLNSAWGKRAWQDL 153 Query: 380 HSRW 391 +S W Sbjct: 154 NSAW 157
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 37.0 bits (84), Expect = 0.021 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -1 Query: 410 KPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPA-TTCCESVLSETGKTA 240 K +P+T ++ P TD KP+++ PATT+ P T PA T S S T TA Sbjct: 283 KALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTA 340
>PIT1_SHEEP (P79364) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 35.4 bits (80), Expect = 0.061 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAHRIT 192 HP+ +C PVS H H + C + S G A SL PCL++ H ++ Sbjct: 28 HPSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYGVMAGSLTPCLYEFPDHTLS 87
>PIT1_BOVIN (P10036) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 33.9 bits (76), Expect = 0.18 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAHRIT 192 HP+ +C PVS H H + C + S G A SL PCL+ H ++ Sbjct: 28 HPSAAECLPVSNHATNVMSTATGLHYSVPFCHYGNQSSTYGVMAGSLTPCLYKFPDHTLS 87
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = -1 Query: 407 PAWPATIGC-ESVSTHPATTDC---KPVSTHPATTSCEPVSTHPATTC 276 PA P T C + T P TT C KP H TT C T + TC Sbjct: 259 PATPTTTSCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTC 306
>FLVC2_MOUSE (Q91X85) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 551 Score = 32.7 bits (73), Expect = 0.39 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -1 Query: 398 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSE 255 P+ G SVS HP+ + VS HP+ + VS P+++ S L++ Sbjct: 37 PSVSGHPSVSGHPSVSGHPSVSIHPSVSIDPSVSVRPSSSALPSTLAQ 84 Score = 32.7 bits (73), Expect = 0.39 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = -1 Query: 377 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSETGKTAVSLVPCLHDGAAHR 198 S S HP+ + VS HP+ + VS HP+ + SV +A+ G H Sbjct: 32 SGSIHPSVSGHPSVSGHPSVSGHPSVSIHPSVSIDPSVSVRPSSSALPSTLAQPSGLTHH 91 Query: 197 ITGVRE 180 + VRE Sbjct: 92 SSLVRE 97
>Y2392_ARCFU (O30279) Hypothetical protein AF2392| Length = 86 Score = 32.3 bits (72), Expect = 0.51 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Frame = +2 Query: 281 WWQDGW-KRVHSWWWQ----DGWKRVCSRWWQDGWKRIHSRWWQARPVYMGMLRP 430 WW GW R WW++ GW R RWW G+ R H + P Y LRP Sbjct: 3 WWMPGWGGRGWRWWYRATGLPGWMR--CRWW--GY-RDHPWDYPPYPPYPPALRP 52
>CRBB1_BOVIN (P07318) Beta crystallin B1| Length = 252 Score = 32.0 bits (71), Expect = 0.67 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Frame = +2 Query: 11 RSAAAAAVTTG------SRPPPGLADGDGGEGAWARRPSAPAADLLTGLPPAA 151 +++A AAV G + PPPG A G G A A P+ PA LPP + Sbjct: 6 KASATAAVNPGPDGKGKAGPPPGPAPGSGPAPAPAPAPAQPAPAAKAELPPGS 58
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 31.6 bits (70), Expect = 0.87 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%) Frame = -1 Query: 407 PAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCC-ESVLSETGKTAVSL 231 P A S+ + PA C P+ + + S +P S A E V+ G+ +L Sbjct: 387 PGGAAFSTATSLPSSPAAAACAPLDSGASENSRKPPSASSAPALARECVVCAEGEVMAAL 446 Query: 230 VPCLHD----GAAHRITGVRE 180 VPC H+ A RI G E Sbjct: 447 VPCGHNLFCMDCAVRICGKSE 467
>YQBO_BACSU (P45931) Hypothetical protein yqbO| Length = 1585 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 15/49 (30%) Frame = +2 Query: 278 RWWQDGWKRVHSW---WWQDG---WKRVCS---------RWWQDGWKRI 379 +WW W+ V SW W + WK V S +WW + W+ + Sbjct: 940 KWWSGKWESVKSWSKNKWDNAKSIWKSVKSSISETLFSKKWWSEKWQSV 988 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 15/59 (25%) Frame = +2 Query: 272 HSRWWQDGWKRVHSW---WWQDG---WKRV---------CSRWWQDGWKRIHSRWWQAR 403 +S WW + W V SW W W+ V +WW W+ + S W Q++ Sbjct: 860 NSEWWSEKWSGVKSWAQNKWNSASPVWESVKGKIKSTLFSEKWWSGKWEGVKS-WAQSK 917
>FLVC2_RAT (P60815) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 546 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -1 Query: 377 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSE 255 SVS HP+ + VS HP+ + VS HP+++ S L++ Sbjct: 38 SVSGHPSVSIHPSVSGHPSVSIDPSVSVHPSSSAHPSTLAQ 78
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = -1 Query: 386 GCESVSTHPATTD---CKPVSTHPATTSCEPVSTHPATTCCES 267 GC + S P T C P +T TT+C P + P C ++ Sbjct: 27 GCPTTSPKPCQTTVPTCAPTTTTTTTTTCAPPTRPPPPPCTDA 69
>SSN6_YEAST (P14922) Glucose repression mediator protein| Length = 966 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Frame = -1 Query: 434 LLAAAFPCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEP-VSTHPATT-CCESVL 261 ++ A P + A PA ++ S P+T KP++T P ++S +P VS+ +TT + Sbjct: 794 VIGAQEPPQEASPAEEATKAASVSPST---KPLNTEPESSSVQPTVSSESSTTKANDQST 850 Query: 260 SETGKTAVSLVP 225 +ET + + + VP Sbjct: 851 AETIELSTATVP 862
>KRA3A_SHEEP (P02443) Keratin, high-sulfur matrix protein, IIIA3A| Length = 130 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -1 Query: 413 CKPAWPATIGCESVSTHP---ATTDCKPVSTHPATTSCEPVS--THPATTC 276 C+P C++V P ATT C+PVS C P S + P TTC Sbjct: 73 CRPITCCPTSCQAVVCRPCCWATTCCQPVSVQ--CPCCRPTSCPSAPRTTC 121
>PIT1_HUMAN (P28069) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAHRIT 192 H + +C PVS H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>CHSX_USTMA (Q99126) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) Length = 760 Score = 30.0 bits (66), Expect = 2.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 317 WWQDGWKRVCSRWWQDGWKRIHSR 388 W +DGWK+V DG K+IH R Sbjct: 340 WGKDGWKKVVVAIISDGRKKIHPR 363
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 341 PVSTHPATTSCEPVSTHPATTCCESVLSETGKTAVSLVP 225 P S P+T+ P S+ P +T S LSE A +P Sbjct: 1541 PPSKEPSTSLSSPHSSEPCSTLARSELSEVSSNAAPSIP 1579
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 413 CKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCE 270 C PA + C+ P CKPV P C PV + +T+CC+ Sbjct: 169 CHPACCTSSPCQQACCVPVR--CKPVCCKPIC--CVPVCSGASTSCCQ 212
>SLAP_BACST (P35825) S-layer protein precursor (Surface layer protein)| Length = 1228 Score = 29.6 bits (65), Expect = 3.3 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +1 Query: 226 GTRLTAVFPVSLRTDSQQVVAGWVETGSQLVVAGWVETGLQSVVAGWVETDSQPMV 393 G + T F L+T S +V G V T +L GWV+ G + V+ +TD+ V Sbjct: 780 GQKFTIQFSEELKTSSGSLVGGKV-TVEKLTNNGWVDAGTGTTVSVAPKTDANGKV 834
>SDC3_CHICK (P26261) Syndecan-3 precursor| Length = 405 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = -1 Query: 416 PCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATT 279 P P+W T + S P+TT + TT+ +ST AT+ Sbjct: 127 PVIPSWKTTTASTTASDSPSTTSTTTTTAATTTTTTTTISTTVATS 172
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/49 (28%), Positives = 23/49 (46%) Frame = -1 Query: 398 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSET 252 P T ++ +T P TT P +T T+ P +T TT ++ + T Sbjct: 474 PTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTTTTTTTTKATTTTT 522 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -1 Query: 392 TIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATT 279 T ++ +T P TT P +T TT+ + +T P TT Sbjct: 416 TTTTKATTTTPTTTTTTPTTTTTTTTTTKATTTTPTTT 453
>KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3| Length = 131 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -1 Query: 422 AFPCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCC 273 A C+P AT C+ VS C+P S PA S T + CC Sbjct: 84 AVVCRPCCWATTCCQPVSVQCPC--CRPTSCQPAPCSRTTCRTFRTSPCC 131
>PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early development| regulatory protein 2) (p36) Length = 850 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 Query: 17 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLP 142 A+ T+G+ G GG G RP+AP + +G+P Sbjct: 14 ASVTTNTSGTNSSSGCISSSGGGGGSGGRPTAPQISVYSGIP 55
>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)| Length = 132 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -1 Query: 422 AFPCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCC 273 A C+P AT C+ VS C+P S PA S T + CC Sbjct: 85 AVVCRPCCWATTCCQPVSVQCPC--CRPTSCQPAPCSRTTCRTFRTSPCC 132
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 393 HHRL*IRFHPSCHHRLQTRFHPSCHHQL*TRFHPSCHH 280 HH+ +FH HH+ Q +FH HH +FH HH Sbjct: 185 HHQQKQQFHD--HHQQQQQFHDHHHHHQEQQFHD--HH 218
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 29.3 bits (64), Expect = 4.3 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +2 Query: 17 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPPAA 151 A+AAA +G PPGLA G G G AP L+ G AA Sbjct: 93 ASAAAPASGPPAPPGLAAGPGPAG------GAPTPALVAGSSAAA 131
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -1 Query: 398 PATIGCESVSTHPATTDCKPVSTH---PATTSCEPVSTHPATTCCESVLSETGKTAVSLV 228 P T S ++ P TT +P ST P TT ++ P TT + + T + + Sbjct: 26 PGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTATQPTXTSTQTPGTTQL 85 Query: 227 P 225 P Sbjct: 86 P 86 Score = 28.1 bits (61), Expect = 9.7 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -1 Query: 398 PATIGCESVSTH---PATTDCKPVSTHPATTSCEPVSTH---PATTCCESVLSETGKTA 240 P T + ST P TT ++ P TT+ +P ST P TT S S TA Sbjct: 11 PTTTATQPTSTSTQTPGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTA 69
>ZAN_RABIT (P57999) Zonadhesin (Fragment)| Length = 2282 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/65 (27%), Positives = 26/65 (40%) Frame = -1 Query: 416 PCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSETGKTAV 237 P P T+ E T P P + TS EP + P+T+ + LS T + Sbjct: 438 PTVPTEEPTVATEK-PTVPTEETTPPTTARSTLTSLEPTTHTPSTSLTSTTLSTTTTPSP 496 Query: 236 SLVPC 222 + V C Sbjct: 497 TTVSC 501
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 29.3 bits (64), Expect = 4.3 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Frame = -1 Query: 413 CKPAWPATIGCESVSTHPA---TTDCKPVSTHPATTSCEPVSTHPATTCCE 270 C+PA + C+ P T CKPV C PV P+++CC+ Sbjct: 90 CQPACCTSSPCQQACCVPVCCKTVCCKPVC-------CMPVCCGPSSSCCQ 133
>FIRA_PLAFF (P06916) 300 kDa antigen AG231 (Fragment)| Length = 310 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -1 Query: 398 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSETG 249 P TI E V+T T +PV+T T+ EPV+T T E + + G Sbjct: 64 PVTIE-EPVTTQEPVTTQEPVTTQEPVTTQEPVTTQEPVTVEEHIDEKKG 112 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -1 Query: 398 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSE 255 P TI E V+T T +PV+T T+ EPV+T T E V ++ Sbjct: 52 PVTIE-EPVTTQEPVTIEEPVTTQEPVTTQEPVTTQEPVTTQEPVTTQ 98
>VL2_HPV35 (P27234) Minor capsid protein L2| Length = 469 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = -1 Query: 407 PAWPATIG---CESVSTHPATTDCKPVSTHPATTSCEPVSTHPAT 282 P P T G S T PA D +STH T +P HP T Sbjct: 128 PRVPPTTGFTITTSTDTTPAILDVTSISTHDNPTFTDPSVLHPPT 172
>PIT1_PIG (Q04788) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAHRIT 192 H + +C P S H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>PIT1_MOUSE (Q00286) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAHRIT 192 H + +C P S H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>ALYS_STRPN (P06653) Autolysin (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine| amidase) (Murein hydrolase) (Mucopeptide aminohydrolase) (Cell wall hydrolase) Length = 318 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 26/70 (37%) Frame = +2 Query: 263 EQIHSRWWQ---------DGWKRVH--SWWWQD-------GWKRVCSRWW--------QD 364 E+I+ W+ D W++ +W+W D GWK++ +W+ + Sbjct: 200 EKINGTWYYFDSSGYMLADRWRKHTDGNWYWFDNSGEMATGWKKIADKWYYFNEEGAMKT 259 Query: 365 GWKRIHSRWW 394 GW + W+ Sbjct: 260 GWVKYKDTWY 269
>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (230 kDa) (PY230) Length = 1772 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -1 Query: 425 AAFPCKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVST 294 A P + A P+T E + P T + +P +TT +PV T Sbjct: 760 APAPAEAASPSTEASEETTIPPTTQETQPSQAASSTTPAKPVMT 803
>BOWEL_DROME (Q9VQU9) Protein bowel (Brother of odd with entrails limited)| Length = 744 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 2 KFNRSAAAAAVTTGSRPPPGLADGDGGEG 88 +F S AAAA G PG AD +GG G Sbjct: 28 QFMNSMAAAAAAVGGGGLPGAADRNGGSG 56
>IF2_LACSS (Q38W81) Translation initiation factor IF-2| Length = 937 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 371 STHPATTDCKPVSTHPATTSCEPVS 297 S P TT+ +P ++ PATT PVS Sbjct: 248 SARPNTTNNRPTNSRPATTPSRPVS 272
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = -1 Query: 380 ESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSETGKTAVSLVP 225 +S S+ + P ++ P T+S P STH ++ S S + S P Sbjct: 40 QSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAP 91
>SMD3_DROME (O44437) Small nuclear ribonucleoprotein SM D3 (snRNP core protein| D3) (SM-D3) Length = 151 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 41 GSRPPPGLADGDGGEGAWARRPS 109 G+ PPG G GG GAW P+ Sbjct: 121 GTGGPPGAPGGSGGRGAWQGGPT 143
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = -1 Query: 380 ESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSETGKTAVSLVP 225 +S S+ + P ++ P T+S P STH ++ S S + S P Sbjct: 40 QSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAP 91
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = -1 Query: 413 CKPAWPATIGCESVST-----HPATTDCKPVSTHPATTSCEPVSTHPATTCC-ESVLSET 252 C+PA T C S+ HP C+ P ++ C P S+ ++ CC S +S Sbjct: 221 CQPACCTTSCCRPSSSVSLLCHPV---CRSTCCVPVSSCCAPTSSCQSSCCCPASCVSLL 277 Query: 251 GKTAVSLVPC 222 + A S + C Sbjct: 278 CRPASSRLAC 287
>PIT1_CANFA (Q9TTI7) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.5 bits (62), Expect = 7.4 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 2/57 (3%) Frame = -1 Query: 365 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSETGKTAVSLVPCLHDGAAH 201 HP +C P S H H + C + S G A L PCL+ H Sbjct: 28 HPGAAECLPGSNHATNVVSTATGLHYSVPSCHYGNQPSTYGVMAGGLTPCLYKFPEH 84
>FLVC2_HUMAN (Q9UPI3) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 526 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -1 Query: 377 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSE 255 SVS HP+ VS HP+ + VS HP+++ S L++ Sbjct: 26 SVSVHPS------VSVHPSVSINPSVSVHPSSSAHPSALAQ 60
>CHSA_EMENI (P30584) Chitin synthase A (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase A) (Class-II chitin synthase A) Length = 1013 Score = 28.5 bits (62), Expect = 7.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 317 WWQDGWKRVCSRWWQDGWKRIHSR 388 W +DGWK++ DG K++H R Sbjct: 329 WGKDGWKKIVVCIISDGRKKVHPR 352
>SORC2_HUMAN (Q96PQ0) VPS10 domain-containing receptor SorCS2 precursor| Length = 1159 Score = 23.9 bits (50), Expect(2) = 8.6 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 3/20 (15%) Frame = +3 Query: 6 SIGLPPP---PRSRPDLVLL 56 S G PPP PRSRP L+LL Sbjct: 21 SPGAPPPPRSPRSRPLLLLL 40 Score = 22.7 bits (47), Expect(2) = 8.6 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Frame = +2 Query: 50 PPPGLADGDGGEGAWAR--RPSAP 115 PP G A+ GGE AR P AP Sbjct: 71 PPAGRAEPGGGEDRQARGTEPGAP 94
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = +2 Query: 11 RSAAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLP 142 RSA A PP L GG G W+RR S +D G P Sbjct: 285 RSAPGAFGGPPRAPPADLPLPVGGPGGWSRRASPAPSDSSPGEP 328
>CTPD_MYCTU (P63685) Probable cation-transporting P-type ATPase D (EC 3.6.3.-)| Length = 657 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 17 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPP 145 AA AA+T PP L GD G AW +A D+ L P Sbjct: 482 AAMAALTAA---PPVLLTGDNGRAAWRVARNAGITDVRAALLP 521
>CTPD_MYCBO (P63686) Probable cation-transporting P-type ATPase D (EC 3.6.3.-)| Length = 657 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 17 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPP 145 AA AA+T PP L GD G AW +A D+ L P Sbjct: 482 AAMAALTAA---PPVLLTGDNGRAAWRVARNAGITDVRAALLP 521
>CDH_PHACH (Q01738) Cellobiose dehydrogenase precursor (EC 1.1.99.18) (CDH)| (Cellobiose-quinone oxidoreductase) Length = 773 Score = 28.1 bits (61), Expect = 9.7 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Frame = -1 Query: 371 STHPATTDCKPVSTHPATTSCEPVS----------THPATTCCESVLSETGKTAVSLVPC 222 S +P TT KP ST + T+ VS P LSE GK + L Sbjct: 207 SGNPTTTSTKPTSTSSSVTTGPTVSATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLE-- 264 Query: 221 LHDGAAHRITGVREALQWALVSG 153 G + + TG WA SG Sbjct: 265 -RGGPSTKQTGGTYVAPWATSSG 286
>MTMR1_HUMAN (Q13613) Myotubularin-related protein 1 (EC 3.1.3.-)| Length = 665 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Frame = +2 Query: 14 SAAAAAVTTGSRPPPGLADG------DGGEGAWARRPSAPAADLLTG 136 +AAAA G P PG A G GG A +R+PS D TG Sbjct: 6 AAAAAGCEGGGGPNPGPAGGRRPPRAAGGATAGSRQPSVETLDSPTG 52
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -1 Query: 407 PAWPATIGCESVSTHP--ATTDCKPVSTHPATTSC-EPVSTHPATTCCESVLSETGKTAV 237 P +T + ST P +TT P ++ +TTS +ST P T+ S S + +A Sbjct: 249 PTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASAS 308 Query: 236 SLV 228 S++ Sbjct: 309 SVI 311
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -1 Query: 413 CKPAWPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTC----CESVL 261 C+P+ ++ C + C+P P ++ C P S++ A+ C C S+L Sbjct: 215 CRPSSSVSLLCRPI--------CRPACCVPISSCCAPASSYQASCCRPASCVSLL 261
>CHS2_ASPNG (P30582) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) (Fragment) Length = 189 Score = 28.1 bits (61), Expect = 9.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 317 WWQDGWKRVCSRWWQDGWKRIHSR 388 W +DGWK++ DG K++H R Sbjct: 27 WGKDGWKKIVVCIIADGRKKVHPR 50
>PCDGM_PANTR (Q5DRA2) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 59 GLADGDGGEGAWARRPSAPAAD 124 G ADGDGG G RR +P+ D Sbjct: 719 GNADGDGGGGQCCRRQDSPSPD 740
>PCDGM_HUMAN (Q9Y5F6) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 59 GLADGDGGEGAWARRPSAPAAD 124 G ADGDGG G RR +P+ D Sbjct: 719 GNADGDGGGGQCCRRQDSPSPD 740 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,998,486 Number of Sequences: 219361 Number of extensions: 1194043 Number of successful extensions: 5842 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 4911 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5762 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
