ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ILV5_SPIOL (Q01292) Ketol-acid reductoisomerase, chloroplast pre... 92 4e-19
2ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precu... 91 1e-18
3ILV5_ARATH (Q05758) Ketol-acid reductoisomerase, chloroplast pre... 89 6e-18
4LRP1_HHV1F (P17588) Latency-related protein 1 28 7.4

>ILV5_SPIOL (Q01292) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 595

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 40/51 (78%), Positives = 49/51 (96%)
 Frame = +2

Query: 281 SLDFDTAVFNKEKVSLAGHEEHIVRGGRNLFPLLPEAFKGVKQIGVIGWGS 433
           + DFD++VF KEKV+L+GH+E+IVRGGRNLFPLLP+AFKG+KQIGVIGWGS
Sbjct: 85  TFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGS 135



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>ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 581

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 41/51 (80%), Positives = 49/51 (96%)
 Frame = +2

Query: 281 SLDFDTAVFNKEKVSLAGHEEHIVRGGRNLFPLLPEAFKGVKQIGVIGWGS 433
           SLDF+T+VF KE+V+LAGHEE+IVRGGR+LF LLP+AFKG+KQIGVIGWGS
Sbjct: 69  SLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGS 119



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>ILV5_ARATH (Q05758) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 591

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = +2

Query: 281 SLDFDTAVFNKEKVSLAGHEEHIVRGGRNLFPLLPEAFKGVKQIGVIGWGS 433
           SLDF+T+VF KEKVSLAG+EE+IVRGGR+LF  LP+AFKG+KQIGVIGWGS
Sbjct: 79  SLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGIKQIGVIGWGS 129



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>LRP1_HHV1F (P17588) Latency-related protein 1|
          Length = 340

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 322 LPRRPRGAHRQGRAEPLPAAP 384
           LPR P  +H   RA PLP AP
Sbjct: 39  LPRTPTPSHPHSRAPPLPRAP 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.140    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,317,776
Number of Sequences: 219361
Number of extensions: 297999
Number of successful extensions: 1172
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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