ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 212 6e-52
2gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 212 6e-52
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 212 6e-52
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
5ref|XM_533188.2| PREDICTED: Canis familiaris similar to solute c... 42 1.4
6emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthet... 42 1.4
7gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
8gb|AY190941.1| Drosophila erecta clone DERF01_12_N08 (D1431) gen... 42 1.4
9dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
10gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete... 42 1.4
11gb|AC154990.1| Homo sapiens chromosome 9 clone fa1066, complete ... 40 5.3
12ref|XM_481490.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
13ref|XM_476120.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
14gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
15gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
16gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.3
17emb|BX649589.3| Human DNA sequence from clone RP5-1175C6 on chro... 40 5.3
18emb|AL050349.27|HSDJ553F4 Human DNA sequence from clone RP4-553F... 40 5.3
19emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.3
20emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.3
21emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 5.3
22dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.3
23gb|AC025426.11| Homo sapiens chromosome 10 clone RP11-242G20, co... 40 5.3
24ref|XM_690543.1| PREDICTED: Danio rerio similar to tripartite mo... 40 5.3
25gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.3
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.3
30dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.3
31dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
32dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
33dbj|AK109150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
34dbj|AK102127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
35gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequ... 40 5.3
36gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.3
37gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.3
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
39emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.3
40dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.3
41dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.3
42dbj|AP004910.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.3
43dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.3
44dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 5.3 
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score =  212 bits (107), Expect = 6e-52
 Identities = 215/251 (85%)
 Strand = Plus / Plus

                                                                          
Query: 149    gggtgggcacgcggggtggtggcgttcgtggcggtggcagtcgcggtgtcagcggggcgg 208
              |||||||| ||||||| ||||||||||| ||||||||| |  |||||| | | |||| ||
Sbjct: 179059 gggtgggcgcgcggggcggtggcgttcgcggcggtggcggcggcggtggcggtggggagg 179118

                                                                          
Query: 209    cggtacagctgggacgtggaggcggcggtcgcggcgttcaggcgcgggaggggctccctg 268
              |||||| | ||||||| |||||||||||| ||||||||| || |  |||||| | | |||
Sbjct: 179119 cggtacgggtgggacggggaggcggcggtggcggcgttccgggggcggagggacgcgctg 179178

                                                                          
Query: 269    gggccctgggcggcacccgcttacgtcgcggcccacgcgctcacgctcgcgctatgccca 328
              || ||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| 
Sbjct: 179179 ggcccctgggcggcgcccgcgtacgtcgcggcgcacgcgctcacgctggcgctgtgcccg 179238

                                                                          
Query: 329    ccctacgccatcttcttcgagggcgccgctgcgctcttcttcgggttcctccctggcgtt 388
              |||||||||||| | |||||||||||||| |||||| ||||||| |||||||| || || 
Sbjct: 179239 ccctacgccatcctgttcgagggcgccgcggcgctcctcttcggcttcctcccgggtgtc 179298

                         
Query: 389    gcctgcgtctt 399
              |||||||||||
Sbjct: 179299 gcctgcgtctt 179309
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score =  212 bits (107), Expect = 6e-52
 Identities = 215/251 (85%)
 Strand = Plus / Plus

                                                                         
Query: 149   gggtgggcacgcggggtggtggcgttcgtggcggtggcagtcgcggtgtcagcggggcgg 208
             |||||||| ||||||| ||||||||||| ||||||||| |  |||||| | | |||| ||
Sbjct: 18414 gggtgggcgcgcggggcggtggcgttcgcggcggtggcggcggcggtggcggtggggagg 18473

                                                                         
Query: 209   cggtacagctgggacgtggaggcggcggtcgcggcgttcaggcgcgggaggggctccctg 268
             |||||| | ||||||| |||||||||||| ||||||||| || |  |||||| | | |||
Sbjct: 18474 cggtacgggtgggacggggaggcggcggtggcggcgttccgggggcggagggacgcgctg 18533

                                                                         
Query: 269   gggccctgggcggcacccgcttacgtcgcggcccacgcgctcacgctcgcgctatgccca 328
             || ||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| 
Sbjct: 18534 ggcccctgggcggcgcccgcgtacgtcgcggcgcacgcgctcacgctggcgctgtgcccg 18593

                                                                         
Query: 329   ccctacgccatcttcttcgagggcgccgctgcgctcttcttcgggttcctccctggcgtt 388
             |||||||||||| | |||||||||||||| |||||| ||||||| |||||||| || || 
Sbjct: 18594 ccctacgccatcctgttcgagggcgccgcggcgctcctcttcggcttcctcccgggtgtc 18653

                        
Query: 389   gcctgcgtctt 399
             |||||||||||
Sbjct: 18654 gcctgcgtctt 18664
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  212 bits (107), Expect = 6e-52
 Identities = 215/251 (85%)
 Strand = Plus / Plus

                                                                            
Query: 149      gggtgggcacgcggggtggtggcgttcgtggcggtggcagtcgcggtgtcagcggggcgg 208
                |||||||| ||||||| ||||||||||| ||||||||| |  |||||| | | |||| ||
Sbjct: 19073865 gggtgggcgcgcggggcggtggcgttcgcggcggtggcggcggcggtggcggtggggagg 19073924

                                                                            
Query: 209      cggtacagctgggacgtggaggcggcggtcgcggcgttcaggcgcgggaggggctccctg 268
                |||||| | ||||||| |||||||||||| ||||||||| || |  |||||| | | |||
Sbjct: 19073925 cggtacgggtgggacggggaggcggcggtggcggcgttccgggggcggagggacgcgctg 19073984

                                                                            
Query: 269      gggccctgggcggcacccgcttacgtcgcggcccacgcgctcacgctcgcgctatgccca 328
                || ||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| 
Sbjct: 19073985 ggcccctgggcggcgcccgcgtacgtcgcggcgcacgcgctcacgctggcgctgtgcccg 19074044

                                                                            
Query: 329      ccctacgccatcttcttcgagggcgccgctgcgctcttcttcgggttcctccctggcgtt 388
                |||||||||||| | |||||||||||||| |||||| ||||||| |||||||| || || 
Sbjct: 19074045 ccctacgccatcctgttcgagggcgccgcggcgctcctcttcggcttcctcccgggtgtc 19074104

                           
Query: 389      gcctgcgtctt 399
                |||||||||||
Sbjct: 19074105 gcctgcgtctt 19074115
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  125 bits (63), Expect = 1e-25
 Identities = 111/127 (87%)
 Strand = Plus / Plus

                                                                            
Query: 273      cctgggcggcacccgcttacgtcgcggcccacgcgctcacgctcgcgctatgcccaccct 332
                |||| ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 18915167 cctgtgcggcgcccgcgtacgtcgcggcgcacgcgctcacgctggcgctgtgcccgccct 18915226

                                                                            
Query: 333      acgccatcttcttcgagggcgccgctgcgctcttcttcgggttcctccctggcgttgcct 392
                |||||||| | ||||| |||||||| |||||| ||||||| |||||||| || || ||||
Sbjct: 18915227 acgccatcctgttcgatggcgccgcggcgctcctcttcggcttcctcccgggtgtcgcct 18915286

                       
Query: 393      gcgtctt 399
                |||||||
Sbjct: 18915287 gcgtctt 18915293



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                            
Query: 149      gggtgggcacgcggggtggtggcgttcgtggcggtggcagtcgcggtgtcagcggggcgg 208
                |||||||| ||||||| ||||||||||| ||||||||| |  |||||| | | |||| ||
Sbjct: 18914692 gggtgggcgcgcggggcggtggcgttcgcggcggtggcggcggcggtggcggtggggagg 18914751

                                                       
Query: 209      cggtacagctgggacgtggaggcggcggtcgcggcgttc 247
                |||||| | ||||||| |||||| ||||| |||||||||
Sbjct: 18914752 cggtacgggtgggacggggaggctgcggtggcggcgttc 18914790
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>ref|XM_533188.2| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc
            transporter), member 13 (LOC475981), mRNA
          Length = 2632

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gggctccctggggccctgggc 279
            |||||||||||||||||||||
Sbjct: 1520 gggctccctggggccctgggc 1500
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>emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthetic gene cluster, strain
             ATCC 11891
          Length = 24720

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   gggcacgcggggtggtggcgt 173
             |||||||||||||||||||||
Sbjct: 12535 gggcacgcggggtggtggcgt 12515
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 231     cggcggtcgcggcgttcaggcgcgggagg 259
               |||||| ||||||||||| ||||||||||
Sbjct: 4386086 cggcggacgcggcgttcatgcgcgggagg 4386058
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>gb|AY190941.1| Drosophila erecta clone DERF01_12_N08 (D1431) genomic sequence
          Length = 43101

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   ggacgtggaggcggcggtcgcggcg 244
             ||||||||||||||||| |||||||
Sbjct: 28672 ggacgtggaggcggcggccgcggcg 28648
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 62      cgcacgccgccgccgtcaccg 82
               |||||||||||||||||||||
Sbjct: 2965199 cgcacgccgccgccgtcaccg 2965179
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>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence
          Length = 191346

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    gacgtggaggcggcggtcgcg 241
              |||||||||||||||||||||
Sbjct: 138407 gacgtggaggcggcggtcgcg 138387
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>gb|AC154990.1| Homo sapiens chromosome 9 clone fa1066, complete sequence
          Length = 35350

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ggggctccctggggccctgg 277
            ||||||||||||||||||||
Sbjct: 8038 ggggctccctggggccctgg 8019
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>ref|XM_481490.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 66 cgccgccgccgtcaccgaca 85
          ||||||||||||||||||||
Sbjct: 70 cgccgccgccgtcaccgaca 51
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>ref|XM_476120.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 66  cgccgccgccgtcaccgaca 85
           ||||||||||||||||||||
Sbjct: 618 cgccgccgccgtcaccgaca 637
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>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12,
             complete sequence
          Length = 131944

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    cgccgccgccgtcaccgaca 85
             ||||||||||||||||||||
Sbjct: 21461 cgccgccgccgtcaccgaca 21442
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>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12,
             complete sequence
          Length = 172647

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    cgccgccgccgtcaccgaca 85
             ||||||||||||||||||||
Sbjct: 98101 cgccgccgccgtcaccgaca 98120
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     cgtcgcggcccacgcgctca 311
               ||||||||||||||||||||
Sbjct: 1614924 cgtcgcggcccacgcgctca 1614943
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>emb|BX649589.3| Human DNA sequence from clone RP5-1175C6 on chromosome 9, complete
             sequence
          Length = 35831

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   ggggctccctggggccctgg 277
             ||||||||||||||||||||
Sbjct: 29140 ggggctccctggggccctgg 29121
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>emb|AL050349.27|HSDJ553F4 Human DNA sequence from clone RP4-553F4 on chromosome 20q11.21-13.13
             Contains the PXMP4 gene for peroxisomal membrane protein 4
             (24kDa), a novel gene, the ZNF341 gene for zinc finger
             protein 341, the C20orf178 gene encoding a protein similar
             to the Drosophila CG8055 protein, the RPL31P2 gene for
             ribosomal protein L31 pseudogene 2, the 3' end of a novel
             gene and two CpG islands, complete sequence
          Length = 155470

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ggcgcgggaggggctccctg 268
             ||||||||||||||||||||
Sbjct: 26946 ggcgcgggaggggctccctg 26965
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     tggaggcggcggtcgcggcg 244
               ||||||||||||||||||||
Sbjct: 1380003 tggaggcggcggtcgcggcg 1379984
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     cgtcgcggcccacgcgctca 311
               ||||||||||||||||||||
Sbjct: 2950256 cgtcgcggcccacgcgctca 2950275
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    ggaggcggcggtcgcggcgt 245
              ||||||||||||||||||||
Sbjct: 109230 ggaggcggcggtcgcggcgt 109249
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     cggtgtcagcggggcggcgg 211
               ||||||||||||||||||||
Sbjct: 1644107 cggtgtcagcggggcggcgg 1644126
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>gb|AC025426.11| Homo sapiens chromosome 10 clone RP11-242G20, complete sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 267  tggggccctgggcggcaccc 286
            ||||||||||||||||||||
Sbjct: 9903 tggggccctgggcggcaccc 9884
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>ref|XM_690543.1| PREDICTED: Danio rerio similar to tripartite motif protein 39
           (LOC567251), mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 207 ggcggtacagctgggacgtggagg 230
           ||||| ||||||||||||||||||
Sbjct: 677 ggcggcacagctgggacgtggagg 700
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     ggtcgcggcgttcaggcgcg 254
               ||||||||||||||||||||
Sbjct: 2528262 ggtcgcggcgttcaggcgcg 2528243
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      ctcgccgcacgccgccgccg 76
               ||||||||||||||||||||
Sbjct: 9275200 ctcgccgcacgccgccgccg 9275181
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 66       cgccgccgccgtcaccgaca 85
                ||||||||||||||||||||
Sbjct: 13026819 cgccgccgccgtcaccgaca 13026838
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 66      cgccgccgccgtcaccgaca 85
               ||||||||||||||||||||
Sbjct: 6267746 cgccgccgccgtcaccgaca 6267765
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 220     ggacgtggaggcggcggtcgcggc 243
               |||||||||||||||| |||||||
Sbjct: 2788320 ggacgtggaggcggcgctcgcggc 2788297
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     cggggtggtggcgttcgtgg 179
               ||||||||||||||||||||
Sbjct: 1967768 cggggtggtggcgttcgtgg 1967787
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>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone: B1052H09
          Length = 190806

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cgccgccgccgtcaccgaca 85
              ||||||||||||||||||||
Sbjct: 163799 cgccgccgccgtcaccgaca 163818
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>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone: B1100F03
          Length = 139217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   cgccgccgccgtcaccgaca 85
            ||||||||||||||||||||
Sbjct: 7339 cgccgccgccgtcaccgaca 7358
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>dbj|AK109150.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F09, full
           insert sequence
          Length = 949

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 66  cgccgccgccgtcaccgaca 85
           ||||||||||||||||||||
Sbjct: 667 cgccgccgccgtcaccgaca 686
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>dbj|AK102127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084P13, full
           insert sequence
          Length = 1841

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 57  ctcgccgcacgccgccgccg 76
           ||||||||||||||||||||
Sbjct: 659 ctcgccgcacgccgccgccg 678
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>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence
          Length = 54288

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gcacgccgccgccgtcaccg 82
             ||||||||||||||||||||
Sbjct: 34915 gcacgccgccgccgtcaccg 34934
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     cggtgtcagcggggcggcgg 211
               ||||||||||||||||||||
Sbjct: 1661083 cggtgtcagcggggcggcgg 1661102
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     ccacgcgctcacgctcgcgc 320
               ||||||||||||||||||||
Sbjct: 2376584 ccacgcgctcacgctcgcgc 2376565
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      ctcgccgcacgccgccgccg 76
               ||||||||||||||||||||
Sbjct: 9275085 ctcgccgcacgccgccgccg 9275066
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>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 190718

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     ctcgccgcacgccgccgccg 76
              ||||||||||||||||||||
Sbjct: 163855 ctcgccgcacgccgccgccg 163874
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     cgctcttcttcgggttcctc 379
               ||||||||||||||||||||
Sbjct: 2804321 cgctcttcttcgggttcctc 2804340
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>dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT21K08, TM0191,
             complete sequence
          Length = 76693

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cacaacaaacgctgctccaa 103
             ||||||||||||||||||||
Sbjct: 46874 cacaacaaacgctgctccaa 46893
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>dbj|AP004910.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12O09, TM0067b,
             complete sequence
          Length = 37710

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    cacaacaaacgctgctccaa 103
             ||||||||||||||||||||
Sbjct: 21811 cacaacaaacgctgctccaa 21792



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    cacaacaaacgctgctccaa 103
             ||||||||||||||||||||
Sbjct: 14968 cacaacaaacgctgctccaa 14949
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>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a,
             complete sequence
          Length = 83232

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cacaacaaacgctgctccaa 103
             ||||||||||||||||||||
Sbjct: 39652 cacaacaaacgctgctccaa 39671
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>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014,
              complete sequence
          Length = 129532

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cacaacaaacgctgctccaa 103
              ||||||||||||||||||||
Sbjct: 101676 cacaacaaacgctgctccaa 101695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,088,944
Number of Sequences: 3902068
Number of extensions: 3088944
Number of successful extensions: 75386
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73583
Number of HSP's gapped (non-prelim): 1803
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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