ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61e12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase Length = 1565 Score = 733 bits (370), Expect = 0.0 Identities = 370/370 (100%) Strand = Plus / Plus Query: 21 cgcacaccatgccgcccacccccaccacccccgcggctaccggcgccgccgccgcggtga 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcacaccatgccgcccacccccaccacccccgcggctaccggcgccgccgccgcggtga 60 Query: 81 cgccggagcacgcgcgaccgcaccgaatggtccgcttcaacccgcgcagcgaccgcttcc 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgccggagcacgcgcgaccgcaccgaatggtccgcttcaacccgcgcagcgaccgcttcc 120 Query: 141 acacgctctccttccaccacgtcgagttctggtgcgcggacgccgcctccgccgccggcc 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 acacgctctccttccaccacgtcgagttctggtgcgcggacgccgcctccgccgccggcc 180 Query: 201 gcttcgcgttcgcgctcggcgcgccgctcgccgccaggtccgacctctccacggggaact 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcttcgcgttcgcgctcggcgcgccgctcgccgccaggtccgacctctccacggggaact 240 Query: 261 ccgcgcacgcctcccagctgctccgctcgggctccctcgccttcctcttcaccgcgccct 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgcgcacgcctcccagctgctccgctcgggctccctcgccttcctcttcaccgcgccct 300 Query: 321 acgccaacggctgcgacgccgccaccgcctccctgccctccttctccgccgacgccgcgc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgccaacggctgcgacgccgccaccgcctccctgccctccttctccgccgacgccgcgc 360 Query: 381 gccggttctc 390 |||||||||| Sbjct: 361 gccggttctc 370
>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete cds Length = 1588 Score = 640 bits (323), Expect = 0.0 Identities = 370/386 (95%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 11 aagaagcgaacgcacaccatgccgcccacccccaccacccccgcggctaccggcgccg-- 68 ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1 aagaagcgaacacacaccatgccgcccacccccaccacccccgcagccaccggcgccggc 60 Query: 69 ----ccgccgcggtgacgccggagcacgcgcgaccgcaccgaatggtccgcttcaacccg 124 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 61 gctgccgccgcggtgacgccggagcacgcgcggccgcgccgaatggtccgcttcaacccg 120 Query: 125 cgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgcggacgcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgcggacgcc 180 Query: 185 gcctccgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccaggtccgac 244 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 181 gcctccgccgccggccgcttcgccttcgcgctcggcgcgccgctcgccgccaggtccgac 240 Query: 245 ctctccacggggaactccgcgcacgcctcccagctgctccgctcgggctccctcgccttc 304 ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 241 ctctccacggggaactccgtgcacgcctcccagctgctccgctcgggcaacctcgccttc 300 Query: 305 ctcttcaccgcgccctacgccaacggctgcgacgccgccaccgcctccctgccctccttc 364 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctcttcaccgcgccctacgcgaacggctgcgacgccgccaccgcctccctgccctccttc 360 Query: 365 tccgccgacgccgcgcgccggttctc 390 |||||||||||||||||||||||||| Sbjct: 361 tccgccgacgccgcgcgccggttctc 386
>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence Length = 1614 Score = 624 bits (315), Expect = e-176 Identities = 365/381 (95%), Gaps = 3/381 (0%) Strand = Plus / Plus Query: 10 caagaagcgaacgcacaccatgccgcccacccccaccacccccgcggctaccggcgccgc 69 |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 8 caagaagcgaacacacaccatgccgcccacccccaccacccccgcagccaccggcgccgc 67 Query: 70 cgccgcggtgacgccggagcacgcgcgaccgcaccgaatggtccgcttcaacccgcgcag 129 ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 68 cgc---ggtgacgccggagcacgcgcggccgcgccgaatggtccgcttcaacccgcgcag 124 Query: 130 cgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgcggacgccgcctc 189 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cgaccgcttccacacgctcgccttccaccacgtcgagttctggtgcgcggacgccgcctc 184 Query: 190 cgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccaggtccgacctctc 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cgccgccggccgcttcgccttcgcgctcggcgcgccgctcgccgccaggtccgacctctc 244 Query: 250 cacggggaactccgcgcacgcctcccagctgctccgctcgggctccctcgccttcctctt 309 |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 245 cacggggaactccgtgcacgcctcccagctgctccgctcgggcaacctcgccttcctctt 304 Query: 310 caccgcgccctacgccaacggctgcgacgccgccaccgcctccctgccctccttctccgc 369 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 cacggccccctacgccaacggctgcgacgccgccaccgcctccctgccctccttctccgc 364 Query: 370 cgacgccgcgcgccggttctc 390 |||||||||||||| |||||| Sbjct: 365 cgacgccgcgcgccagttctc 385
>ref|XM_464255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1341 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 118 caacccgcgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgc 177 ||||||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||| Sbjct: 111 caacccgcggagcgaccggttccaggcgctcgcgttccaccacgtcgagctctggtgcgc 170 Query: 178 ggacgccgcctccgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccag 237 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 171 cgacgccgcgtccgccgcgggccggttcgccttcgccctgggcgcgccgctcgccgccag 230 Query: 238 gtccgacctctccacggggaactccgcgcacgcctcccagctgctccgctcgggctccct 297 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||| | Sbjct: 231 gtccgacctctccacggggaactccgcgcacgcctccctcctcctccgctccgcctccgt 290 Query: 298 cgccttcctcttcaccgcgccctacg 323 ||| |||||||||||||| ||||||| Sbjct: 291 cgcgttcctcttcaccgccccctacg 316
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Minus Query: 118 caacccgcgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgc 177 ||||||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||| Sbjct: 3679774 caacccgcggagcgaccggttccaggcgctcgcgttccaccacgtcgagctctggtgcgc 3679715 Query: 178 ggacgccgcctccgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccag 237 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 3679714 cgacgccgcgtccgccgcgggccggttcgccttcgccctgggcgcgccgctcgccgccag 3679655 Query: 238 gtccgacctctccacggggaactccgcgcacgcctcccagctgctccgctcgggctccct 297 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||| | Sbjct: 3679654 gtccgacctctccacggggaactccgcgcacgcctccctcctcctccgctccgcctccgt 3679595 Query: 298 cgccttcctcttcaccgcgccctacg 323 ||| |||||||||||||| ||||||| Sbjct: 3679594 cgcgttcctcttcaccgccccctacg 3679569 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gccgcctccgccgccggccgc 202 ||||||||||||||||||||| Sbjct: 18309447 gccgcctccgccgccggccgc 18309467 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gcgcggacgccgcctccgccgccg 197 |||||| ||||||||||||||||| Sbjct: 30905046 gcgcgggcgccgcctccgccgccg 30905069 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 21327542 cccgcggctaccgccgccgccgcc 21327565 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 18309539 cgccgcctccgccgccggcc 18309558 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgcgacgccgccaccgcctc 351 |||||||||||||||||||| Sbjct: 795886 tgcgacgccgccaccgcctc 795905 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 |||||||||||||||||| ||||| Sbjct: 491744 acgccgcctccgccgccgtccgct 491767
>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G09 Length = 140067 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Minus Query: 118 caacccgcgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgc 177 ||||||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||| Sbjct: 20091 caacccgcggagcgaccggttccaggcgctcgcgttccaccacgtcgagctctggtgcgc 20032 Query: 178 ggacgccgcctccgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccag 237 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 20031 cgacgccgcgtccgccgcgggccggttcgccttcgccctgggcgcgccgctcgccgccag 19972 Query: 238 gtccgacctctccacggggaactccgcgcacgcctcccagctgctccgctcgggctccct 297 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||| | Sbjct: 19971 gtccgacctctccacggggaactccgcgcacgcctccctcctcctccgctccgcctccgt 19912 Query: 298 cgccttcctcttcaccgcgccctacg 323 ||| |||||||||||||| ||||||| Sbjct: 19911 cgcgttcctcttcaccgccccctacg 19886
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Minus Query: 118 caacccgcgcagcgaccgcttccacacgctctccttccaccacgtcgagttctggtgcgc 177 ||||||||| |||||||| ||||| ||||| | ||||||||||||||| |||||||||| Sbjct: 161064 caacccgcggagcgaccggttccaggcgctcgcgttccaccacgtcgagctctggtgcgc 161005 Query: 178 ggacgccgcctccgccgccggccgcttcgcgttcgcgctcggcgcgccgctcgccgccag 237 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||||| Sbjct: 161004 cgacgccgcgtccgccgcgggccggttcgccttcgccctgggcgcgccgctcgccgccag 160945 Query: 238 gtccgacctctccacggggaactccgcgcacgcctcccagctgctccgctcgggctccct 297 |||||||||||||||||||||||||||||||||||||| || |||||||| | |||| | Sbjct: 160944 gtccgacctctccacggggaactccgcgcacgcctccctcctcctccgctccgcctccgt 160885 Query: 298 cgccttcctcttcaccgcgccctacg 323 ||| |||||||||||||| ||||||| Sbjct: 160884 cgcgttcctcttcaccgccccctacg 160859
>emb|AJ309203.1|CBL309203 Coleus blumei mRNA for 4-hydroxyphenylpyruvate dioxygenase (hppd_SOLSC gene) Length = 1657 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 152 ttccaccacgtcgagttctggtgcgcggacgccgcctccgccgccggccgcttcgcgttc 211 ||||||||||| ||||||||||||| |||||| || | || || | |||||| ||| Sbjct: 287 ttccaccacgtggagttctggtgcggagacgccaccaacacctcccgtcgcttctcgtgg 346 Query: 212 gcgctcggcgcgccgctcgccgccaggtccgacctctccacggggaactccgcgcacgcc 271 | |||||| ||| |||| ||||| |||||||||||||| |||||||| || |||||| Sbjct: 347 ggcctcggcatgcctctcgtcgccaaatccgacctctccaccgggaactctgcccacgcc 406 Query: 272 tcccagctgctccgctc 288 ||| | || |||||||| Sbjct: 407 tcctatctcctccgctc 423
>ref|XM_516824.1| PREDICTED: Pan troglodytes similar to RAP2B, member of RAS oncogene family (LOC460789), mRNA Length = 856 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 ||||||||||||||||||||||||| Sbjct: 119 cgccgccaccgcctccctgccctcc 143
>ref|NM_002886.2| Homo sapiens RAP2B, member of RAS oncogene family (RAP2B), mRNA Length = 6237 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 ||||||||||||||||||||||||| Sbjct: 101 cgccgccaccgcctccctgccctcc 125
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 171 ggtgcgcggacgccgcctccgccgccggc 199 ||||||| ||||||||||||||||||||| Sbjct: 60298 ggtgcgccgacgccgcctccgccgccggc 60326
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 171 ggtgcgcggacgccgcctccgccgccggc 199 ||||||| ||||||||||||||||||||| Sbjct: 24762190 ggtgcgccgacgccgcctccgccgccggc 24762162
>gb|AC117394.10| Homo sapiens 3 BAC RP11-529G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198170 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 337 cgccgccaccgcctccctgccctcc 361 ||||||||||||||||||||||||| Sbjct: 73405 cgccgccaccgcctccctgccctcc 73381
>gb|AY957391.1| Medicago truncatula 4-hydroxyphenylpyruvate dioxygenase (HPD) mRNA, complete cds Length = 1630 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 151 cttccaccacgtcgagttctggtgc 175 ||||||||||||||||||||||||| Sbjct: 141 cttccaccacgtcgagttctggtgc 165
>dbj|AK120284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049N05, full insert sequence Length = 836 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 171 ggtgcgcggacgccgcctccgccgccggc 199 ||||||| ||||||||||||||||||||| Sbjct: 121 ggtgcgccgacgccgcctccgccgccggc 93
>emb|AJ330592.1|HSA330592 Homo sapiens genomic sequence surrounding NotI site, clone NL1-AA13R Length = 718 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 ||||||||||||||||||||||||| Sbjct: 210 cgccgccaccgcctccctgccctcc 234
>dbj|AK062126.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D09, full insert sequence Length = 786 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 171 ggtgcgcggacgccgcctccgccgccggc 199 ||||||| ||||||||||||||||||||| Sbjct: 130 ggtgcgccgacgccgcctccgccgccggc 102
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 171 ggtgcgcggacgccgcctccgccgccggc 199 ||||||| ||||||||||||||||||||| Sbjct: 25073860 ggtgcgccgacgccgcctccgccgccggc 25073832
>gb|BC012362.1| Homo sapiens RAP2B, member of RAS oncogene family, mRNA (cDNA clone MGC:20484 IMAGE:4650072), complete cds Length = 1913 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 ||||||||||||||||||||||||| Sbjct: 71 cgccgccaccgcctccctgccctcc 95
>emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in linkage group 16, complete sequence Length = 189081 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 25 caccatgccgcccacccccaccac 48 |||||||||||||||||||||||| Sbjct: 65755 caccatgccgcccacccccaccac 65732
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 gcggctaccggcgccgccgccgcg 76 |||||||||||||||||||||||| Sbjct: 26732719 gcggctaccggcgccgccgccgcg 26732696 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gctgcgacgccgccaccgcctccc 353 ||||| |||||||||||||||||| Sbjct: 16598944 gctgccacgccgccaccgcctccc 16598967 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ctaccggcgccgccgccgcg 76 |||||||||||||||||||| Sbjct: 6964902 ctaccggcgccgccgccgcg 6964883
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 gcggctaccggcgccgccgccgcg 76 |||||||||||||||||||||||| Sbjct: 90182 gcggctaccggcgccgccgccgcg 90159
>ref|XM_482430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 gcttcgcgttcgcgctcggcgcg 223 ||||||||||||||||||||||| Sbjct: 893 gcttcgcgttcgcgctcggcgcg 915
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 gttcgcgctcggcgcgccgctcgccgc 234 |||||||||||||||||||||| |||| Sbjct: 3928143 gttcgcgctcggcgcgccgctcaccgc 3928169 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgc 234 ||||||||||||| |||||||||| Sbjct: 3111299 cgcgctcggcgcggcgctcgccgc 3111276 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gcgccgccgccgcggtgacg 82 |||||||||||||||||||| Sbjct: 2540548 gcgccgccgccgcggtgacg 2540567 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cgcgttcgcgctcggcgcgc 224 |||||||||||||||||||| Sbjct: 2113228 cgcgttcgcgctcggcgcgc 2113247
>emb|X76076.1|SLRECA S.lividans RecA gene Length = 2085 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 174 gcgcggacgccgcctccgccgcc 196 ||||||||||||||||||||||| Sbjct: 1881 gcgcggacgccgcctccgccgcc 1903
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 gttcgcgctcggcgcgccgctcgccgc 234 |||||||||||||||||||||| |||| Sbjct: 3670006 gttcgcgctcggcgcgccgctcaccgc 3670032 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgc 234 ||||||||||||| |||||||||| Sbjct: 2841389 cgcgctcggcgcggcgctcgccgc 2841366 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgc 224 |||||||||||||||||||| Sbjct: 2260015 cgcgttcgcgctcggcgcgc 2259996 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gcgccgccgccgcggtgacg 82 |||||||||||||||||||| Sbjct: 1841963 gcgccgccgccgcggtgacg 1841944
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 174 gcgcggacgccgcctccgccgcc 196 ||||||||||||||||||||||| Sbjct: 18675 gcgcggacgccgcctccgccgcc 18697
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 gcttcgcgttcgcgctcggcgcg 223 ||||||||||||||||||||||| Sbjct: 20040210 gcttcgcgttcgcgctcggcgcg 20040232 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ggcgccgccgccgcggtgacg 82 ||||||||||||||||||||| Sbjct: 26154781 ggcgccgccgccgcggtgacg 26154761 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccg 194 |||||||||||||||||||| Sbjct: 20158113 cgcggacgccgcctccgccg 20158132 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 9839385 cgacgccgccaccgcctccc 9839404 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 6311255 cccgcggctaccgccgccgccgcc 6311232
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 gcttcgcgttcgcgctcggcgcg 223 ||||||||||||||||||||||| Sbjct: 112061 gcttcgcgttcgcgctcggcgcg 112083
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 cctcgccttcctcttcaccgcg 316 |||||||||||||||||||||| Sbjct: 80727 cctcgccttcctcttcaccgcg 80706
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 ccccgcggctaccggcgccgccgccg 74 |||||||||| ||||||||||||||| Sbjct: 26868856 ccccgcggcttccggcgccgccgccg 26868881
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggccgc 202 |||||||||||||||||||||| Sbjct: 426892 cgccgcctccgccgccggccgc 426913
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 ccccgcggctaccggcgccgccgccg 74 |||||||||| ||||||||||||||| Sbjct: 47856 ccccgcggcttccggcgccgccgccg 47881
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 ggctgcgacgccgccaccgcct 350 |||||||||||||||||||||| Sbjct: 192181 ggctgcgacgccgccaccgcct 192160
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 205 cgcgttcgcgctcggcgcgccgctcgccgc 234 |||| |||||| |||||||||||||||||| Sbjct: 798073 cgcgctcgcgcgcggcgcgccgctcgccgc 798102 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgccgct 228 ||||||||||| |||||||||||| Sbjct: 3070295 cgcgttcgcgcacggcgcgccgct 3070272 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgccgc 234 |||||||| ||||||||||||||| Sbjct: 800499 cgcgctcgacgcgccgctcgccgc 800522 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgc 234 |||||||||||||| ||||||||| Sbjct: 425859 cgcgctcggcgcgcggctcgccgc 425836
>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22, complete sequence Length = 152676 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 gctaccggcgccgccgccgcgg 77 |||||||||||||||||||||| Sbjct: 32079 gctaccggcgccgccgccgcgg 32058
>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence Length = 189055 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gtgcgcggacgccgcctccgccgccg 197 |||||||||||||||| ||||||||| Sbjct: 62090 gtgcgcggacgccgccgccgccgccg 62065
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 gttcgcgctcggcgcgccgctc 229 |||||||||||||||||||||| Sbjct: 513936 gttcgcgctcggcgcgccgctc 513915 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgccgct 228 ||||||||||| |||||||||||| Sbjct: 2219012 cgcgttcgcgcacggcgcgccgct 2218989
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 gctaccggcgccgccgccgcgg 77 |||||||||||||||||||||| Sbjct: 1511913 gctaccggcgccgccgccgcgg 1511892 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 11455163 cgacgccgccaccgcctccc 11455144
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 cgcccacccccaccacccccgc 54 |||||||||||||||||||||| Sbjct: 8773367 cgcccacccccaccacccccgc 8773346 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 26008890 cctccgccgccggccgcttc 26008871 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cggctaccggcgccgccgccgcgg 77 |||||||||||||||||| ||||| Sbjct: 20889565 cggctaccggcgccgccggcgcgg 20889588 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 7723498 cgacgccgccaccgcctccc 7723517 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 3704064 accacgccggcggccaccggcgccgccgccgc 3704033 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 ||||||||||||||||| |||||| Sbjct: 1748783 acgccgcctccgccgcccgccgct 1748806
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 cctcgccttcctcttcaccgcg 316 |||||||||||||||||||||| Sbjct: 19480015 cctcgccttcctcttcaccgcg 19479994 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcctccgccgccggccgcttcgc 207 |||||| ||||||||||||||||| Sbjct: 23995638 cgcctcagccgccggccgcttcgc 23995661 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 ccgccaccgcctccctgccctccttctccgcc 370 ||||||||||||||| | |||||||| ||||| Sbjct: 16728086 ccgccaccgcctccccgtcctccttcgccgcc 16728055 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 7133672 cccgcggctaccgccgccgccgcc 7133649
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 ccccgcggctaccggcgccgccgccg 74 |||||||||| ||||||||||||||| Sbjct: 26960179 ccccgcggcttccggcgccgccgccg 26960204
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgccaggtc 240 ||||| ||||||||||| |||||||||||| Sbjct: 4578638 cgcgcgcggcgcgccgcccgccgccaggtc 4578609 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gccgcccacccccaccacccc 51 ||||||||||||||||||||| Sbjct: 16310331 gccgcccacccccaccacccc 16310351 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gacgccgcctccgccgccggccgc 202 |||||||||||||||||| ||||| Sbjct: 39414938 gacgccgcctccgccgcccgccgc 39414961 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cgcggctaccggcgccgccgccgc 75 |||||| ||||||||||||||||| Sbjct: 35026504 cgcggcgaccggcgccgccgccgc 35026527 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 24039561 cccgcggctaccgccgccgccgcc 24039584 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 21630976 cctccgccgccggccgcttc 21630957 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctccttctccgccgacgccgcgcgccg 384 |||||| | ||||||||||||||||||| Sbjct: 21064827 cctcctccgccgccgacgccgcgcgccg 21064854 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 cctccttctccgccgacgccgcgcgccg 384 ||||||||||||||| ||||| |||||| Sbjct: 12164274 cctccttctccgccgccgccgggcgccg 12164247 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccgcctccgccgccggccgc 202 |||||||||||||||||||| Sbjct: 7872772 ccgcctccgccgccggccgc 7872791
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccc 358 |||||||||||||||||||||| Sbjct: 5319184 cgccgccaccgcctccctgccc 5319205 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggacgccgcctccgccgccg 197 ||||||||||||||||||||| Sbjct: 7607422 cggacgccgcctccgccgccg 7607442
>gb|AF204401.1|AF204401 Streptomyces chrysomallus actinomycin synthetase III (acmC) gene, complete cds Length = 12744 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 acgccgcctccgccgccggccg 201 |||||||||||||||||||||| Sbjct: 589 acgccgcctccgccgccggccg 568
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039C01 Length = 151054 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 cgcccacccccaccacccccgc 54 |||||||||||||||||||||| Sbjct: 132008 cgcccacccccaccacccccgc 131987
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgccaggtc 240 ||||| ||||||||||| |||||||||||| Sbjct: 113325 cgcgcgcggcgcgccgcccgccgccaggtc 113296
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458G06 Length = 139109 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 cgcccacccccaccacccccgc 54 |||||||||||||||||||||| Sbjct: 3467 cgcccacccccaccacccccgc 3446
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgcttcgcgttcg 212 ||||||||||||||||| |||||| ||||| Sbjct: 163435 ccgcctccgccgccggcggcttcgagttcg 163406
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgcttcgcgttcg 212 ||||||||||||||||| |||||| ||||| Sbjct: 163435 ccgcctccgccgccggcggcttcgagttcg 163406
>gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.112_J_9, complete sequence Length = 179651 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gtgcgcggacgccgcctccgccgccg 197 |||||||||||||||| ||||||||| Sbjct: 146713 gtgcgcggacgccgccgccgccgccg 146688
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gcgctcggcgcgccgctcgccg 233 |||||||||||||||||||||| Sbjct: 3277061 gcgctcggcgcgccgctcgccg 3277040 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 cgcttcgcgttcgcgctcggcgcgc 224 ||||||||| ||||||||||||||| Sbjct: 1662087 cgcttcgcggtcgcgctcggcgcgc 1662063 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 cggcgcgccgctcgccgccag 237 ||||||||||||||||||||| Sbjct: 967838 cggcgcgccgctcgccgccag 967818 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgc 224 |||||||||||||||||||| Sbjct: 2903112 cgcgttcgcgctcggcgcgc 2903093 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgc 234 |||||||||||||||||| ||||| Sbjct: 960510 cgcgctcggcgcgccgcttgccgc 960487
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 tgccctccttctccgccgacgc 375 |||||||||||||||||||||| Sbjct: 69176 tgccctccttctccgccgacgc 69155
>gb|U31202.1|HSU31202 Human noggin (NOGGIN) gene, complete cds Length = 1557 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gtgcgcggacgccgcctccgccgccg 197 |||||||||||||||| ||||||||| Sbjct: 301 gtgcgcggacgccgccgccgccgccg 326
>ref|XM_483426.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ggcgccgccgccgcggtgacg 82 ||||||||||||||||||||| Sbjct: 695 ggcgccgccgccgcggtgacg 675
>ref|XM_465919.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gccgcctccgccgccggccgc 202 ||||||||||||||||||||| Sbjct: 116 gccgcctccgccgccggccgc 96 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 24 cgccgcctccgccgccggcc 5
>ref|NM_197527.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.27), mRNA Length = 816 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 ggacgccgcctccgccgccggccgc 202 |||||||||| |||||||||||||| Sbjct: 84 ggacgccgccgccgccgccggccgc 60
>ref|NM_197511.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.15), mRNA Length = 549 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 291 cggcgccgccgccgcggtgac 311
>ref|NM_197310.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.8), mRNA Length = 1509 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagcac 91 |||||||| |||||||||||||||| Sbjct: 372 cgccgccgtggtgacgccggagcac 396
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgc 231 ||||||||||||||||||||| Sbjct: 3405163 cgcgctcggcgcgccgctcgc 3405183
>ref|NM_184579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gccgcccacccccaccacccc 51 ||||||||||||||||||||| Sbjct: 23 gccgcccacccccaccacccc 3
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgct 203 ||||||||||||||||||||| Sbjct: 102052 ccgcctccgccgccggccgct 102032
>ref|XM_869638.1| PREDICTED: Bos taurus similar to Runt-related transcription factor 3 (Core-binding factor, alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 ... (LOC617389), mRNA Length = 1681 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggccg 201 ||||||||||||||||||||| Sbjct: 1156 cgccgcctccgccgccggccg 1136
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 tcgcgctcggcgcgccgctcgccgc 234 ||||| ||||||||||||||||||| Sbjct: 2435558 tcgcggtcggcgcgccgctcgccgc 2435582
>ref|XM_977082.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1565 cgccgccaccacctccctgccctcc 1589
>ref|XM_977119.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1215 cgccgccaccacctccctgccctcc 1239
>ref|XM_920394.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 4 (Prdm13), mRNA Length = 3476 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1583 cgccgccaccacctccctgccctcc 1607
>ref|XM_907402.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 3 (Prdm13), mRNA Length = 3126 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1233 cgccgccaccacctccctgccctcc 1257
>ref|XM_131309.6| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1565 cgccgccaccacctccctgccctcc 1589
>ref|XM_884367.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1215 cgccgccaccacctccctgccctcc 1239
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagcac 91 |||||||| |||||||||||||||| Sbjct: 21155 cgccgccgtggtgacgccggagcac 21179
>gb|BC017632.1| Mus musculus PR domain containing 13, mRNA (cDNA clone IMAGE:4507465), containing frame-shift errors Length = 3271 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 1565 cgccgccaccacctccctgccctcc 1589
>emb|AL596451.4| Human DNA sequence from clone RP11-75C9 on chromosome 9 Contains 2 novel genes, complete sequence Length = 130513 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gcccacccccaccacccccgc 54 ||||||||||||||||||||| Sbjct: 72399 gcccacccccaccacccccgc 72419
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tccttccaccacgtcgagttc 169 ||||||||||||||||||||| Sbjct: 149026 tccttccaccacgtcgagttc 149046
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgct 203 ||||||||||||||||||||| Sbjct: 336994 ccgcctccgccgccggccgct 336974
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 7847 cggcgccgccgccgcggtgac 7827
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgccgcc 235 ||||||||||| ||||||||||||| Sbjct: 1282171 cgcgctcggcgtgccgctcgccgcc 1282195 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 tcgcgttcgcgctcggcgcgccgctcgc 231 ||||||||||||||| | |||||||||| Sbjct: 2211636 tcgcgttcgcgctcgtctcgccgctcgc 2211663
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cggacgccgcctccgccgccg 197 ||||||||||||||||||||| Sbjct: 24612 cggacgccgcctccgccgccg 24592
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccggccgc 202 |||||||||| |||||||||||||| Sbjct: 146234 ggacgccgccgccgccgccggccgc 146258 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 36379 cggcgccgccgccgcggtgac 36399
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ccgccgcggtgacgccggagc 89 ||||||||||||||||||||| Sbjct: 2326928 ccgccgcggtgacgccggagc 2326908 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 cccccgcggctaccggcgccgccgccgc 75 |||| |||||||||| |||||||||||| Sbjct: 3182117 ccccagcggctaccgccgccgccgccgc 3182144
>emb|AL672159.14| Mouse DNA sequence from clone RP23-145B5 on chromosome 4, complete sequence Length = 101291 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 cgccgccaccgcctccctgccctcc 361 |||||||||| |||||||||||||| Sbjct: 61520 cgccgccaccacctccctgccctcc 61496
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 gccgccgccgcggtgacgccggagc 89 |||||||||||||||||||| |||| Sbjct: 1742645 gccgccgccgcggtgacgcccgagc 1742669 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gcgctcggcgcgccgctcgccgcc 235 |||||| ||||||||||||||||| Sbjct: 1348662 gcgctctgcgcgccgctcgccgcc 1348639
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccggccgc 202 |||||||||| |||||||||||||| Sbjct: 20268499 ggacgccgccgccgccgccggccgc 20268523 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 20158644 cggcgccgccgccgcggtgac 20158664 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagcac 91 |||||||| |||||||||||||||| Sbjct: 19168811 cgccgccgtggtgacgccggagcac 19168835 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgct 203 ||||||||||||||||||||| Sbjct: 336994 ccgcctccgccgccggccgct 336974
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 tgcgcggacgccgcctccgccgccg 197 ||||| ||||||||||||||||||| Sbjct: 22306636 tgcgccgacgccgcctccgccgccg 22306612 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccg 197 |||||||||||||||||||| Sbjct: 15528551 ggacgccgcctccgccgccg 15528570
>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide mycinamicin, partial and comeplete cds Length = 58343 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 ccctcgccttcctcttcaccg 314 ||||||||||||||||||||| Sbjct: 15727 ccctcgccttcctcttcaccg 15747
>gb|AC156453.2| Volvox carteri clone JGIAOBO-9A1, complete sequence Length = 34624 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgccg 74 ||||| ||||||||||||||||||| Sbjct: 33982 cccgccgctaccggcgccgccgccg 33958
>gb|AY204463.1| Myxococcus xanthus clone C1143 hypothetical protein gene, partial cds; adventurous gliding motility protein D (agmD), and hypothetical protein genes, complete cds; and integrase gene, partial cds Length = 4891 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 gcgccgctcgccgccaggtcc 241 ||||||||||||||||||||| Sbjct: 3631 gcgccgctcgccgccaggtcc 3611
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgc 231 ||||||||||||||||||||| Sbjct: 3358860 cgcgctcggcgcgccgctcgc 3358880 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 gcgccgctcgccgccaggtcc 241 ||||||||||||||||||||| Sbjct: 3176754 gcgccgctcgccgccaggtcc 3176734 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 4810003 cgcgctcggcgcgccgctcg 4809984 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tcggcgcgccgctcgccgcc 235 |||||||||||||||||||| Sbjct: 4278672 tcggcgcgccgctcgccgcc 4278691 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gtgcgcggacgccgcctccgccgc 195 |||||||| ||||||||||||||| Sbjct: 3400286 gtgcgcgggcgccgcctccgccgc 3400263 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 1917248 cgccgcctccgccgccggcc 1917267 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tcgcgctcggcgcgccgctcgccg 233 ||||||||||||||| |||||||| Sbjct: 1095875 tcgcgctcggcgcgctgctcgccg 1095852
>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence Length = 169741 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ccatgccgcccacccccaccacccc 51 ||||||||||||||||| ||||||| Sbjct: 76657 ccatgccgcccaccccccccacccc 76681
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 tgcgcggacgccgcctccgccgccg 197 ||||| ||||||||||||||||||| Sbjct: 126534 tgcgccgacgccgcctccgccgccg 126510
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 cgccgccggccgcttcgcgttcgcg 214 ||||||||||||||||||| ||||| Sbjct: 132694 cgccgccggccgcttcgcggtcgcg 132718
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gccgcccacccccaccacccc 51 ||||||||||||||||||||| Sbjct: 72408 gccgcccacccccaccacccc 72428
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 tgcgcggacgccgcctccgccgccg 197 ||||| ||||||||||||||||||| Sbjct: 68644 tgcgccgacgccgcctccgccgccg 68620
>gb|AY823511.1| Ichthyomyzon gagei peptide YY (PYY) mRNA, complete cds Length = 929 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 cctcgccttcctcttcaccgc 315 ||||||||||||||||||||| Sbjct: 406 cctcgccttcctcttcaccgc 426
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gccgcctccgccgccggccgc 202 ||||||||||||||||||||| Sbjct: 110660 gccgcctccgccgccggccgc 110680 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 110752 cgccgcctccgccgccggcc 110771
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ggcgccgccgccgcggtgacg 82 ||||||||||||||||||||| Sbjct: 98712 ggcgccgccgccgcggtgacg 98692
>dbj|AK122080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120J20, full insert sequence Length = 1830 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ccgcctccgccgccggccgct 203 ||||||||||||||||||||| Sbjct: 29 ccgcctccgccgccggccgct 49
>dbj|AK106313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D07, full insert sequence Length = 1346 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 922 cggcgccgccgccgcggtgac 942
>dbj|AK105216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B04, full insert sequence Length = 1145 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 ggacgccgcctccgccgccggccgc 202 |||||||||| |||||||||||||| Sbjct: 170 ggacgccgccgccgccgccggccgc 146
>dbj|AK073197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B10, full insert sequence Length = 2075 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagcac 91 |||||||| |||||||||||||||| Sbjct: 408 cgccgccgtggtgacgccggagcac 432
>dbj|AB091438.1| Burkholderia multivorans genes for hypothetical proteins, putative transmembrane protein, argininosuccinate synthase, partial and complete cds Length = 5408 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgc 231 ||||||||||||||||||||| Sbjct: 627 cgcgctcggcgcgccgctcgc 647
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 cgcacaccatgccgcccaccc 41 ||||||||||||||||||||| Sbjct: 4672916 cgcacaccatgccgcccaccc 4672936 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgccgcggtgacgccggagca 90 ||||||||||||||||||||| Sbjct: 4383851 cgccgcggtgacgccggagca 4383871 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgacgccgcgcgccggttct 389 |||||||||||||||||||| Sbjct: 4111330 cgacgccgcgcgccggttct 4111349 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ccgcctccctgccctccttc 364 |||||||||||||||||||| Sbjct: 931437 ccgcctccctgccctccttc 931456
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccggccgc 202 |||||||||| |||||||||||||| Sbjct: 20279775 ggacgccgccgccgccgccggccgc 20279799 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cggcgccgccgccgcggtgac 81 ||||||||||||||||||||| Sbjct: 20169920 cggcgccgccgccgcggtgac 20169940 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagcac 91 |||||||| |||||||||||||||| Sbjct: 19180087 cgccgccgtggtgacgccggagcac 19180111 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgcctccgccgccggccgct 203 ||||||||||||||||||||| Sbjct: 336991 ccgcctccgccgccggccgct 336971
>emb|AJ488721.1|TGR488721 Tectarius grandinatus partial 18S rRNA gene, specimen voucher TECT.TON.1 Length = 963 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 ccaggtccgacctctccacggggaa 258 |||| |||||||||||||||||||| Sbjct: 136 ccagctccgacctctccacggggaa 160
>dbj|D49835.1| Homo sapiens mRNA for DNA-binding protein, complete cds Length = 5817 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggccgcttc 205 ||||||| ||||||||||||||||| Sbjct: 89 cgccgccgccgccgccggccgcttc 113
>dbj|AB017641.1| Micromonospora griseorubida gene for polyketide synthase, complete cds Length = 17101 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 ccctcgccttcctcttcaccg 314 ||||||||||||||||||||| Sbjct: 9341 ccctcgccttcctcttcaccg 9361
>ref|XM_482451.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccg 194 |||||||||||||||||||| Sbjct: 321 cgcggacgccgcctccgccg 340
>ref|XM_481097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 252 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 229 cgacgccgccaccgcctccc 210
>ref|XM_480632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 414 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 170 cccgcggctaccgccgccgccgcc 147
>ref|XM_463866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tgcgacgccgccaccgcctc 351 |||||||||||||||||||| Sbjct: 395 tgcgacgccgccaccgcctc 376
>ref|NM_183770.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 405 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 cctccttctccgccgacgccgcgcgccg 384 ||||||||||||||| ||||| |||||| Sbjct: 379 cctccttctccgccgccgccgggcgccg 352
>ref|NM_190356.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cgcggctaccggcgccgccgccgc 75 |||||| ||||||||||||||||| Sbjct: 918 cgcggcgaccggcgccgccgccgc 895
>ref|NM_192723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 530 cccgcggctaccgccgccgccgcc 507
>ref|NM_193565.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 754 cctccgccgccggccgcttc 735
>ref|NM_193472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1578 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctccttctccgccgacgccgcgcgccg 384 |||||| | ||||||||||||||||||| Sbjct: 399 cctcctccgccgccgacgccgcgcgccg 426
>ref|NM_193060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 437 cctccgccgccggccgcttc 456
>ref|XM_478539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cggctaccggcgccgccgccgcgg 77 |||||||||||||||||| ||||| Sbjct: 167 cggctaccggcgccgccggcgcgg 190
>ref|XM_477209.1| Oryza sativa (japonica cultivar-group), mRNA Length = 423 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 337 cgacgccgccaccgcctccc 318
>ref|XM_476739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 1800 accacgccggcggccaccggcgccgccgccgc 1769
>ref|XM_506182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0050F10.9 mRNA Length = 2205 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 1861 accacgccggcggccaccggcgccgccgccgc 1830
>ref|NM_186238.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 ||||||||||||||||| |||||| Sbjct: 772 acgccgcctccgccgcccgccgct 795
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 ccgccaccgcctccctgccctccttctccgcc 370 ||||||||||||||| | |||||||| ||||| Sbjct: 52196 ccgccaccgcctccccgtcctccttcgccgcc 52165
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cttccacacgctctccttcc 155 |||||||||||||||||||| Sbjct: 2157639 cttccacacgctctccttcc 2157658
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 193 cgccggccgcttcgcgttcgcgctcggcgcgc 224 |||| ||||||||||| ||||||||| ||||| Sbjct: 2918330 cgcctgccgcttcgcgctcgcgctcgccgcgc 2918361 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgc 224 |||||||||||||||||||| Sbjct: 1346716 cgcgttcgcgctcggcgcgc 1346697 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gcgccgccgccgcggtgacg 82 |||||||||||||||||||| Sbjct: 1025140 gcgccgccgccgcggtgacg 1025121 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgccgc 234 ||||||||||||| |||||||||| Sbjct: 663741 cgcgctcggcgcggcgctcgccgc 663764
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcctccgccgccggccgcttcgc 207 |||||| ||||||||||||||||| Sbjct: 64127 cgcctcagccgccggccgcttcgc 64150
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 88521 cccgcggctaccgccgccgccgcc 88498
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcgccgc 234 |||||||| ||||||||||||||| Sbjct: 2620505 cgcgctcgacgcgccgctcgccgc 2620528 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcgccgc 234 |||||||||||||| ||||||||| Sbjct: 2264487 cgcgctcggcgcgcggctcgccgc 2264464 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 cgcgttcgcgctcggcgcgccgct 228 ||||||||||| |||||||||||| Sbjct: 1735418 cgcgttcgcgcacggcgcgccgct 1735395
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 48380 cgcgctcggcgcgccgctcg 48361
>ref|NM_198513.1| Homo sapiens PHD finger protein 20-like 1 (PHF20L1), transcript variant 3, mRNA Length = 3256 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 56 cgccgcctccgccgccggcc 37
>ref|NM_016018.3| Homo sapiens PHD finger protein 20-like 1 (PHF20L1), transcript variant 1, mRNA Length = 5454 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 56 cgccgcctccgccgccggcc 37
>ref|NM_032205.2| Homo sapiens PHD finger protein 20-like 1 (PHF20L1), transcript variant 2, mRNA Length = 2281 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 56 cgccgcctccgccgccggcc 37
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcctccgccgccggccgcttcgc 207 |||||| ||||||||||||||||| Sbjct: 16769 cgcctcagccgccggccgcttcgc 16746
>gb|AC122407.4| Mus musculus BAC clone RP24-129G24 from chromosome 12, complete sequence Length = 137860 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccacccccaccacccccgc 54 |||||||||||||||||||| Sbjct: 39565 cccacccccaccacccccgc 39546
>emb|CR727067.2|CNS0GNY9 Tetraodon nigroviridis full-length cDNA Length = 1414 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cctccctgccctccttctcc 367 |||||||||||||||||||| Sbjct: 865 cctccctgccctccttctcc 846
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 accggcgccgccgccgcggt 78 |||||||||||||||||||| Sbjct: 440533 accggcgccgccgccgcggt 440514
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggcgcgccgctcgccgcca 236 |||||||||||||||||||| Sbjct: 1845251 cggcgcgccgctcgccgcca 1845232 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccttccaccacgtcgagttc 169 |||||||||||||||||||| Sbjct: 1641154 ccttccaccacgtcgagttc 1641173
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gctcggcgcgccgctcgccg 233 |||||||||||||||||||| Sbjct: 1317197 gctcggcgcgccgctcgccg 1317216
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 2549815 cgcgctcggcgcgccgctcg 2549834 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 2054830 cgcgctcggcgcgccgctcg 2054811
>emb|AL023807.6|HS525L6 Human DNA sequence from clone RP3-525L6 on chromosome 6p22.3-23 Contains the 5' end of a gene for a kinesin-like protein (RBKIN) protein, a ribosomal protein S12 (RPS12) pseudogene and a CpG Island, complete sequence Length = 168111 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcgcggacgccgcctccgcc 193 |||||||||||||||||||| Sbjct: 28880 gcgcggacgccgcctccgcc 28861
>gb|DQ115822.1| Cyanobacteria phage AS-1 contig_15 genomic sequence Length = 1643 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 accggcgccgccgccgcggt 78 |||||||||||||||||||| Sbjct: 917 accggcgccgccgccgcggt 898
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 216204 cgcgctcggcgcgccgctcg 216223
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 135360 cgcgctcggcgcgccgctcg 135379
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 214252 cgcgctcggcgcgccgctcg 214271
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 ccgcggctaccggcgccgccgccgcggt 78 ||||||| ||||||||||||||||||| Sbjct: 7593 ccgcggccgccggcgccgccgccgcggt 7620
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ccaccacccccgcggctacc 61 |||||||||||||||||||| Sbjct: 85311 ccaccacccccgcggctacc 85330
>gb|AY505110.1| Equus caballus CHORI-241 BAC 93G22 glycogen branching enzyme (GBE1) gene, partial cds Length = 609 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 gcggacgccgcctccgccgccggccgct 203 |||| |||||||||| |||||||||||| Sbjct: 286 gcgggcgccgcctcctccgccggccgct 313
>gb|AF228727.4| Homo sapiens chromosome 8 clone CTC-215C12 map 8q24.3, complete sequence Length = 121358 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 72670 cgccgcctccgccgccggcc 72651
>gb|AE012101.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 9 of 460 of the complete genome Length = 10710 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cgccgccgccgcggtgacgc 83 |||||||||||||||||||| Sbjct: 7221 cgccgccgccgcggtgacgc 7240
>gb|DQ406744.1| Volvox carteri f. nagariensis Met1 (met1) gene, complete cds Length = 29854 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccccaccacccccgcg 55 |||||||||||||||||||| Sbjct: 21149 ccacccccaccacccccgcg 21168
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gctaccggcgccgccgccgc 75 |||||||||||||||||||| Sbjct: 1617515 gctaccggcgccgccgccgc 1617534
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 accggcgccgccgccgcggtgacgccgg 86 |||||| ||||||||| ||||||||||| Sbjct: 597828 accggcaccgccgccgaggtgacgccgg 597855
>gb|AC009622.9| Homo sapiens chromosome , clone RP11-207A4, complete sequence Length = 183687 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 51785 cgccgcctccgccgccggcc 51804
>gb|AC152059.4| Mus musculus BAC clone RP24-283B23 from chromosome 12, complete sequence Length = 180085 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccacccccaccacccccgc 54 |||||||||||||||||||| Sbjct: 54333 cccacccccaccacccccgc 54352
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cgccgccgccgcggtgacgc 83 |||||||||||||||||||| Sbjct: 92772 cgccgccgccgcggtgacgc 92791
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gctcggcgcgccgctcgccg 233 |||||||||||||||||||| Sbjct: 1203500 gctcggcgcgccgctcgccg 1203519
>dbj|AP006229.1| Chirocentrus dorab mitochondrial DNA, almost complete genome Length = 15989 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gcccacccccaccacccccg 53 |||||||||||||||||||| Sbjct: 4158 gcccacccccaccacccccg 4177
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ctgccctccttctccgccgacgcc 376 |||||||||| ||||||||||||| Sbjct: 148 ctgccctcctcctccgccgacgcc 171
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagca 90 ||||||||||| |||||||||||| Sbjct: 2783543 cgccgccgcggcgacgccggagca 2783566
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctccttctccgccgacgccgcgcgccg 384 |||||| | ||||||||||||||||||| Sbjct: 32372 cctcctccgccgccgacgccgcgcgccg 32399
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 15383 cccgcggctaccgccgccgccgcc 15406
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctccttctccgccgacgccgcgcgccg 384 |||||| | ||||||||||||||||||| Sbjct: 128029 cctcctccgccgccgacgccgcgcgccg 128056
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccgcctccgccgccggccgc 202 |||||||||||||||||||| Sbjct: 67718 ccgcctccgccgccggccgc 67737
>dbj|AP006839.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa108M02 Length = 38208 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gacgccgcctccgccgccggccgc 202 |||||||||||||||||| ||||| Sbjct: 25462 gacgccgcctccgccgcccgccgc 25485
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 85902 cctccgccgccggccgcttc 85883
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cggctaccggcgccgccgccgcgg 77 |||||||||||||||||| ||||| Sbjct: 100355 cggctaccggcgccgccggcgcgg 100378
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 42452 cctccgccgccggccgcttc 42433
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cgcggctaccggcgccgccgccgc 75 |||||| ||||||||||||||||| Sbjct: 33654 cgcggcgaccggcgccgccgccgc 33677
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cgcggctaccggcgccgccgccgc 75 |||||| ||||||||||||||||| Sbjct: 70732 cgcggcgaccggcgccgccgccgc 70755
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gctgcgacgccgccaccgcctccc 353 ||||| |||||||||||||||||| Sbjct: 94924 gctgccacgccgccaccgcctccc 94947
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgcgacgccgccaccgcctc 351 |||||||||||||||||||| Sbjct: 5094 tgcgacgccgccaccgcctc 5113
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgcgacgccgccaccgcctc 351 |||||||||||||||||||| Sbjct: 74017 tgcgacgccgccaccgcctc 74036
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 |||||||||||||||||| ||||| Sbjct: 87985 acgccgcctccgccgccgtccgct 88008
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 cctccttctccgccgacgccgcgcgccg 384 ||||||||||||||| ||||| |||||| Sbjct: 131214 cctccttctccgccgccgccgggcgccg 131187
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 87529 cctccgccgccggccgcttc 87510
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ctaccggcgccgccgccgcg 76 |||||||||||||||||||| Sbjct: 24329 ctaccggcgccgccgccgcg 24310
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccg 197 |||||||||||||||||||| Sbjct: 49406 ggacgccgcctccgccgccg 49425
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 ||||||||||||||||| |||||| Sbjct: 90983 acgccgcctccgccgcccgccgct 91006
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 48415 accacgccggcggccaccggcgccgccgccgc 48384
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 acgccgcctccgccgccggccgct 203 ||||||||||||||||| |||||| Sbjct: 1002 acgccgcctccgccgcccgccgct 1025
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 67587 cgacgccgccaccgcctccc 67606
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cggctaccggcgccgccgccgcgg 77 |||||||||||||||||| ||||| Sbjct: 17480 cggctaccggcgccgccggcgcgg 17503
>dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0435E12 Length = 143188 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 110077 cccgcggctaccgccgccgccgcc 110100
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gcgcggacgccgcctccgccgccg 197 |||||| ||||||||||||||||| Sbjct: 88623 gcgcgggcgccgcctccgccgccg 88646
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1734_E04 Length = 101439 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cccgcggctaccggcgccgccgcc 73 ||||||||||||| |||||||||| Sbjct: 97392 cccgcggctaccgccgccgccgcc 97369
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccg 194 |||||||||||||||||||| Sbjct: 23899 cgcggacgccgcctccgccg 23918
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccg 194 |||||||||||||||||||| Sbjct: 104659 cgcggacgccgcctccgccg 104678
>dbj|AK111564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N09, full insert sequence Length = 2343 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 525 cctccgccgccggccgcttc 544
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 103317 cgacgccgccaccgcctccc 103336
>dbj|AK107516.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F04, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cctccgccgccggccgcttc 205 |||||||||||||||||||| Sbjct: 897 cctccgccgccggccgcttc 878
>gb|AC006445.11|AC006445 Homo sapiens chromosome 4 clone C0367I21, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ccgcggctaccggcgccgccgccg 74 |||||||||||| ||||||||||| Sbjct: 107938 ccgcggctaccgccgccgccgccg 107961
>dbj|AK107049.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C12, full insert sequence Length = 1677 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctccttctccgccgacgccgcgcgccg 384 |||||| | ||||||||||||||||||| Sbjct: 211 cctcctccgccgccgacgccgcgcgccg 238
>dbj|AK105668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H12, full insert sequence Length = 2008 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 1800 accacgccggcggccaccggcgccgccgccgc 1769
>dbj|AK100970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B18, full insert sequence Length = 1416 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggacgccgcctccgccgccg 197 |||||||||||||||||||| Sbjct: 10 ggacgccgcctccgccgccg 29
>dbj|AK071229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K16, full insert sequence Length = 1381 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcctccgccgccggccgcttcgc 207 |||||| ||||||||||||||||| Sbjct: 26 cgcctcagccgccggccgcttcgc 3
>dbj|AK068637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L19, full insert sequence Length = 1476 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcctccgccgccggccgcttcgc 207 |||||| ||||||||||||||||| Sbjct: 174 cgcctcagccgccggccgcttcgc 151
>dbj|AK068262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149M23, full insert sequence Length = 2205 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 accacccccgcggctaccggcgccgccgccgc 75 ||||| || ||||| ||||||||||||||||| Sbjct: 1861 accacgccggcggccaccggcgccgccgccgc 1830
>gb|AF191543.1|AF191543 Mycobacterium avium subsp. paratuberculosis PurN (purN) and PurH (purH) genes, complete cds Length = 2750 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ccgcctccctgccctccttc 364 |||||||||||||||||||| Sbjct: 391 ccgcctccctgccctccttc 410
>gb|AY105328.1| Zea mays PCO087722 mRNA sequence Length = 1078 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccacccccaccacccccgc 54 |||||||||||||||||||| Sbjct: 501 cccacccccaccacccccgc 520
>tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for collagen, type VI, alpha 3 and mlph gene for melanophilin Length = 212696 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccacccccaccacccccgc 54 |||||||||||||||||||| Sbjct: 37145 cccacccccaccacccccgc 37126
>emb|CT824639.4| Human DNA sequence from clone XX-HCC1954_10I14, complete sequence Length = 114515 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggcc 200 |||||||||||||||||||| Sbjct: 52799 cgccgcctccgccgccggcc 52818
>gb|U12423.1|AEU12423 Alcaligenes eutrophus H16 megaplasmid pHG1, cbb CO2 fixation operon, glyceraldehyde-3-phosphate dehydrogenase (cbbGp), 3-phosphoglycerate kinase (cbbKp) and fructose-1,6-bisphosphate aldolase (cbbAp) genes, complete cds Length = 3534 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 accggcgccgccgccgcggt 78 |||||||||||||||||||| Sbjct: 696 accggcgccgccgccgcggt 715
>gb|AF005260.1|AF005260 Homo sapiens homeodomain-containing protein BAPX1 gene, complete cds Length = 4449 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ccgcggctaccggcgccgccgccg 74 |||||||||||| ||||||||||| Sbjct: 339 ccgcggctaccgccgccgccgccg 362
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cgcccacccccaccaccccc 52 |||||||||||||||||||| Sbjct: 16177 cgcccacccccaccaccccc 16158
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 cgccgccgcggtgacgccggagca 90 ||||||||||| |||||||||||| Sbjct: 2783487 cgccgccgcggcgacgccggagca 2783510
>emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed Doberman Length = 197532 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccacccccaccacccccgc 54 |||||||||||||||||||| Sbjct: 37195 cccacccccaccacccccgc 37176
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cgccgccgcggtgacgccggagca 90 ||||||||||| |||||||||||| Sbjct: 86904 cgccgccgcggcgacgccggagca 86881
>emb|AL606602.2|OSJN00067 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0056F09, complete sequence Length = 148191 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgacgccgccaccgcctccc 353 |||||||||||||||||||| Sbjct: 80776 cgacgccgccaccgcctccc 80757
>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence Length = 212626 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 caccgcctccctgccctcct 362 |||||||||||||||||||| Sbjct: 87547 caccgcctccctgccctcct 87528
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cgcgctcggcgcgccgctcg 230 |||||||||||||||||||| Sbjct: 48298 cgcgctcggcgcgccgctcg 48279
>gb|AF009802.1|AF009802 Homo sapiens homeodomain protein (BAPX1) gene, complete cds Length = 4750 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ccgcggctaccggcgccgccgccg 74 |||||||||||| ||||||||||| Sbjct: 129 ccgcggctaccgccgccgccgccg 152
>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules 1-7, (tylG) gene, complete cds Length = 43280 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccccaccacccccgcg 55 |||||||||||||||||||| Sbjct: 34011 ccacccccaccacccccgcg 34030 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccccaccacccccgcg 55 |||||||||||||||||||| Sbjct: 22807 ccacccccaccacccccgcg 22826 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccccaccacccccgcg 55 |||||||||||||||||||| Sbjct: 6667 ccacccccaccacccccgcg 6686
>gb|M62893.1|WHTEMGCF13 Triticum aestivum DNA binding protein (EmBP-1b) mRNA, complete cds Length = 1400 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccgccgg 198 ||||| |||||||||||||||||| Sbjct: 211 cgcggccgccgcctccgccgccgg 234
>gb|AC010625.6| Homo sapiens chromosome 5 clone CTD-2128F4, complete sequence Length = 139409 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 cgccgcctccgccgccggccgcttcgcgttcg 212 ||||||| | |||||| ||||||||||||||| Sbjct: 55521 cgccgccacagccgccagccgcttcgcgttcg 55552
>gb|U10467.1|TAU10467 Triticum aestivum Chinese spring bZIP protein (EmBP-1a) mRNA, partial cds Length = 945 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccgccgg 198 ||||| |||||||||||||||||| Sbjct: 270 cgcggccgccgcctccgccgccgg 293
>gb|U07933.1|TAU07933 Triticum aestivum Chinese spring DNA-Binding protein (EmBP-1a) mRNA, complete cds Length = 1499 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 cgcggacgccgcctccgccgccgg 198 ||||| |||||||||||||||||| Sbjct: 286 cgcggccgccgcctccgccgccgg 309 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,554,037 Number of Sequences: 3902068 Number of extensions: 3554037 Number of successful extensions: 144886 Number of sequences better than 10.0: 215 Number of HSP's better than 10.0 without gapping: 238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126871 Number of HSP's gapped (non-prelim): 18014 length of query: 390 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 368 effective length of database: 17,147,199,772 effective search space: 6310169516096 effective search space used: 6310169516096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
