| Clone Name | bast61e09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UMP6_ARATH (Q9SX77) Unknown protein At1g47420, mitochondrial pre... | 54 | 2e-07 | 2 | LYAM2_MOUSE (Q00690) E-selectin precursor (Endothelial leukocyte... | 29 | 4.1 | 3 | GPT1_YEAST (P32784) Glycerol-3-phosphate O-acyltransferase 1 (EC... | 29 | 5.4 | 4 | ISTA_PSEAE (P15025) Transposase for insertion sequence element IS21 | 28 | 7.1 |
|---|
>UMP6_ARATH (Q9SX77) Unknown protein At1g47420, mitochondrial precursor| Length = 257 Score = 53.9 bits (128), Expect = 2e-07 Identities = 24/49 (48%), Positives = 33/49 (67%) Frame = +2 Query: 275 RMFSSNEKHLPPISDPKIETAFKDLMAASWNELPGSLVEEAKKEVSKAT 421 R FS + H+P + D + AFKDLMAA W ELP ++V++AK +SK T Sbjct: 87 RRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNT 135
>LYAM2_MOUSE (Q00690) E-selectin precursor (Endothelial leukocyte adhesion| molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD62E antigen) Length = 612 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 427 SSSSFRYFFLCFLNKRTRKLIPAGSHQILKCSLNFRV 317 +SSS Y + + K+ +K +PA S Q L+ N+ V Sbjct: 571 TSSSLLYLLMRYFRKKAKKFVPASSCQSLQSFENYHV 607
>GPT1_YEAST (P32784) Glycerol-3-phosphate O-acyltransferase 1 (EC 2.3.1.15)| (G-3-P acyltransferase 1) (Dihydroxyacetone phosphate acyltransferase 1) (EC 2.3.1.42) (DHAP-AT 1) (Glycerol-3-phosphate / dihydroxyacetone phosphate acyltransferase 1) Length = 759 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +2 Query: 269 SRRMFSSNEKHLPPISDPKIETAFKDLMAAS----WNELPGSLVEEAKKEVSKATG 424 +RRM E + +DPKI KD+MA + LP LVEEAK +K G Sbjct: 382 NRRMVKGYEFYR---NDPKIADLTKDIMAYNAALRHYNLPDHLVEEAKVNFAKNLG 434
>ISTA_PSEAE (P15025) Transposase for insertion sequence element IS21| Length = 390 Score = 28.5 bits (62), Expect = 7.1 Identities = 10/37 (27%), Positives = 20/37 (54%) Frame = +2 Query: 257 FSWNSRRMFSSNEKHLPPISDPKIETAFKDLMAASWN 367 F + F+ ++HL P+ D +T++ D+ SW+ Sbjct: 273 FKETPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSWD 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,361,594 Number of Sequences: 219361 Number of extensions: 575611 Number of successful extensions: 1793 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1778 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1793 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)