ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 337 2e-89
2gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 289 4e-75
3ref|XM_472441.1| Oryza sativa (japonica cultivar-group), predic... 107 3e-20
4emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 107 3e-20
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
6dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
7dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
8dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
9dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
10emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4,... 107 3e-20
11gb|AY105615.1| Zea mays PCO070046 mRNA sequence 101 2e-18
12ref|NM_193413.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
13gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence 46 0.093
14gb|AY105648.1| Zea mays PCO074907 mRNA sequence 46 0.093
15gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswel... 42 1.5
16gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswel... 42 1.5
17gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Can... 42 1.5
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
22emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-9... 42 1.5
23gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 ... 42 1.5
24gb|U92042.1|CPU92042 Cryphonectria parasitica mating type 1 pher... 42 1.5
25gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 ... 42 1.5
26gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Can... 42 1.5
27emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chro... 42 1.5
28gb|AC160856.2| Homo sapiens chromosome 2 clone WI2-3200G4, compl... 40 5.8
29gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, compl... 40 5.8
30gb|AC100149.12| Mus musculus chromosome 10, clone RP23-43F3, com... 40 5.8
31gb|AC124157.4| Equus caballus clone CH241-37P10, complete sequence 40 5.8
32gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, comp... 40 5.8
33gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide... 40 5.8
34gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosom... 40 5.8
35gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome... 40 5.8
36gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome... 40 5.8
37gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, com... 40 5.8
38gb|AC153809.2| Homo sapiens chromosome 2 clone fa0884, complete ... 40 5.8
39gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cance... 40 5.8
40gb|AC144450.2| Homo sapiens fosmid clone XXFOS-8097D7 from 2, co... 40 5.8
41emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chro... 40 5.8
42dbj|AK129581.1| Homo sapiens cDNA FLJ26070 fis, clone PRS09374 40 5.8
43gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, comp... 40 5.8
44gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 5.8 
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score =  337 bits (170), Expect = 2e-89
 Identities = 179/182 (98%)
 Strand = Plus / Minus

                                                                         
Query: 241   agatggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaaca 300
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 78854 agatggcaacaatgctttctcatggaactccaggcgcatgttcagttcaaatgagaaaca 78795

                                                                         
Query: 301   tctgcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccag 360
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78794 tctgcctccaatatctgacccggaaattgagactgcatttaaggatttgatggctgccag 78735

                                                                         
Query: 361   ctggaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctac 420
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 78734 ctggaatgagcttccgggttctctcgttgaggaagcaaagaaagaagtatctaaagctac 78675

               
Query: 421   tg 422
             ||
Sbjct: 78674 tg 78673



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                         
Query: 165   gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcgcgcctgg 224
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80044 gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcgcgcctgg 79985

                               
Query: 225   gatcctgcgtcacccgag 242
             ||||||||||||||||||
Sbjct: 79984 gatcctgcgtcacccgag 79967



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 167   aggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcg 217
             ||||||||||||| ||| |||| ||||||| |||||||||||||| |||||
Sbjct: 84178 aggtcggcggcggtgggtctggagacgcggatgcccctgcacagcacggcg 84128



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1     agcagcccccaaagccgcaggc 22
             ||||||||||||||||||||||
Sbjct: 80302 agcagcccccaaagccgcaggc 80281
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>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score =  289 bits (146), Expect = 4e-75
 Identities = 173/182 (95%)
 Strand = Plus / Minus

                                                                         
Query: 241   agatggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaaca 300
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 79825 agatggcaacaatgctttctcatggaactccaggcgcatgttcagttcaaatgagaaaca 79766

                                                                         
Query: 301   tctgcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccag 360
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 79765 tctgcctgcaatatctgacccgaaaattgagactgcatttaaggatttgatggctgctag 79706

                                                                         
Query: 361   ctggaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctac 420
             |||||| |||||||| ||||||||||| |||||||||||||||| ||||||||  |||||
Sbjct: 79705 ctggaacgagcttccaggttctcttgtggaggaagcaaagaaagcagtatctatggctac 79646

               
Query: 421   tg 422
             ||
Sbjct: 79645 tg 79644



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 165   gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcg 217
             ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||
Sbjct: 81028 gcaggtcggcggcggcgggtctggggacgcggatgcccctccacagcgcggcg 80976
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>ref|XM_472441.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 771

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                       
Query: 244 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 150 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 209

                                                                       
Query: 304 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 210 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 269

                                                                       
Query: 364 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
           || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 270 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 328

                 
Query: 424 atgata 429
           ||||||
Sbjct: 329 atgata 334
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                         
Query: 244   tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
             |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 98090 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 98149

                                                                         
Query: 304   gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
             |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 98150 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 98209

                                                                         
Query: 364   gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
             || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 98210 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 98268

                   
Query: 424   atgata 429
             ||||||
Sbjct: 98269 atgata 98274
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                            
Query: 244      tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
                |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 20663656 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 20663715

                                                                            
Query: 304      gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
                |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 20663716 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 20663775

                                                                            
Query: 364      gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
                || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 20663776 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 20663834

                      
Query: 424      atgata 429
                ||||||
Sbjct: 20663835 atgata 20663840
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>dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F05, full
           insert sequence
          Length = 970

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                       
Query: 244 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 214 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 273

                                                                       
Query: 304 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 274 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 333

                                                                       
Query: 364 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
           || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 334 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 392

                 
Query: 424 atgata 429
           ||||||
Sbjct: 393 atgata 398
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>dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A04, full
           insert sequence
          Length = 1116

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                       
Query: 244 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272

                                                                       
Query: 304 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332

                                                                       
Query: 364 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
           || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 333 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 391

                 
Query: 424 atgata 429
           ||||||
Sbjct: 392 atgata 397
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>dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I07, full
           insert sequence
          Length = 1007

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                       
Query: 244 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 199 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 258

                                                                       
Query: 304 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 259 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 318

                                                                       
Query: 364 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
           || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 319 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 377

                 
Query: 424 atgata 429
           ||||||
Sbjct: 378 atgata 383
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>dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H01, full
           insert sequence
          Length = 1111

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                       
Query: 244 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272

                                                                       
Query: 304 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332

                                                                       
Query: 364 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
           || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 333 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 391

                 
Query: 424 atgata 429
           ||||||
Sbjct: 392 atgata 397
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>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11,
            complete sequence
          Length = 124629

 Score =  107 bits (54), Expect = 3e-20
 Identities = 154/186 (82%), Gaps = 1/186 (0%)
 Strand = Plus / Plus

                                                                        
Query: 244  tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 303
            |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 9807 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 9866

                                                                        
Query: 304  gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 363
            |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 9867 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 9926

                                                                        
Query: 364  gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactgg 423
            || ||  ||||| | |||||||||    |||||||||||||  | ||| |||||||| ||
Sbjct: 9927 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctac-gg 9985

                  
Query: 424  atgata 429
            ||||||
Sbjct: 9986 atgata 9991
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>gb|AY105615.1| Zea mays PCO070046 mRNA sequence
          Length = 1106

 Score =  101 bits (51), Expect = 2e-18
 Identities = 114/135 (84%)
 Strand = Plus / Plus

                                                                       
Query: 283 cagttcaaatgagaaacatctgcctccaatatctgacccgaaaattgagactgcatttaa 342
           |||||||||||| |||||  ||||  |||||||||| ||  |||| ||  ||||||||||
Sbjct: 267 cagttcaaatgaaaaacacttgcccgcaatatctgatccagaaatagaatctgcatttaa 326

                                                                       
Query: 343 ggatttgatggctgccagctggaatgagcttccgggttctcttgttgaggaagcaaagaa 402
           ||||||| ||||||| || |||||||| ||||| | ||||||||| | ||||||||||||
Sbjct: 327 ggatttgttggctgctagttggaatgaacttccagattctcttgtagcggaagcaaagaa 386

                          
Query: 403 agaagtatctaaagc 417
           || || |||||||||
Sbjct: 387 agcagcatctaaagc 401
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>ref|NM_193413.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 282

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 158 atcctccgcaggtcggcggcggcgg 182
           |||||||||||||||||||||||||
Sbjct: 124 atcctccgcaggtcggcggcggcgg 148



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 179 gcgggcctggcgacgcgggtgcccctgcacagcgcgg 215
           ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 154 gcggggctggagacgctgatgcccctgcacagcgcgg 190
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>gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence
          Length = 1056

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 338 tttaaggatttgatggctgccagctggaatgagct 372
           |||||||| ||||||||||| |||||| |||||||
Sbjct: 374 tttaaggacttgatggctgcaagctgggatgagct 408
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>gb|AY105648.1| Zea mays PCO074907 mRNA sequence
          Length = 556

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 156 ggatcctccgcaggtcggcggcggcgg 182
           |||||||||||||||||||||| ||||
Sbjct: 174 ggatcctccgcaggtcggcggccgcgg 200
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>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172175

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    ccgagatggcaacaatgcttt 258
              |||||||||||||||||||||
Sbjct: 155462 ccgagatggcaacaatgcttt 155482
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>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 166862

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   ccgagatggcaacaatgcttt 258
             |||||||||||||||||||||
Sbjct: 39292 ccgagatggcaacaatgcttt 39272
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>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 180869

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 284 agttcaaatgagaaacatctg 304
           |||||||||||||||||||||
Sbjct: 837 agttcaaatgagaaacatctg 857
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 179      gcgggcctggcgacgcgggtgcccctgcacagcgcgg 215
                ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 20697028 gcggggctggagacgctgatgcccctgcacagcgcgg 20697064
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>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0066C06
          Length = 162304

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 179   gcgggcctggcgacgcgggtgcccctgcacagcgcgg 215
             ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 39986 gcggggctggagacgctgatgcccctgcacagcgcgg 40022
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0024F24
          Length = 172642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 179    gcgggcctggcgacgcgggtgcccctgcacagcgcgg 215
              ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 159004 gcggggctggagacgctgatgcccctgcacagcgcgg 159040
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 165     gcaggtcggcggcggcgggcc 185
               |||||||||||||||||||||
Sbjct: 1934531 gcaggtcggcggcggcgggcc 1934511



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     ggtcggcggcggcgggcctg 187
               ||||||||||||||||||||
Sbjct: 1076845 ggtcggcggcggcgggcctg 1076864
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>emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-902B17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184260

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 392    gaagcaaagaaagaagtatct 412
              |||||||||||||||||||||
Sbjct: 142978 gaagcaaagaaagaagtatct 142998
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>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
             sequence
          Length = 303191

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   ccgagatggcaacaatgcttt 258
             |||||||||||||||||||||
Sbjct: 30679 ccgagatggcaacaatgcttt 30659
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>gb|U92042.1|CPU92042 Cryphonectria parasitica mating type 1 pheromone precursor (mf1-1)
            gene, complete cds
          Length = 3412

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 171  cggcggcggcgggcctggcgacgcgggtg 199
            ||||||||||||| |||||| ||||||||
Sbjct: 1917 cggcggcggcggggctggcgtcgcgggtg 1889
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>gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 DS05969 (D229)), complete
            sequence
          Length = 63178

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 238  ccgagatggcaacaatgcttt 258
            |||||||||||||||||||||
Sbjct: 2475 ccgagatggcaacaatgcttt 2495
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>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 197906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   agttcaaatgagaaacatctg 304
             |||||||||||||||||||||
Sbjct: 37299 agttcaaatgagaaacatctg 37279
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>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete
             sequence
          Length = 189104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   atgttcagttcaaatgagaaa 298
             |||||||||||||||||||||
Sbjct: 53759 atgttcagttcaaatgagaaa 53779
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>gb|AC160856.2| Homo sapiens chromosome 2 clone WI2-3200G4, complete sequence
          Length = 40756

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 219  gcctgggatcctgcgtcacccgag 242
            |||||||||||||| |||||||||
Sbjct: 8098 gcctgggatcctgcatcacccgag 8121
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>gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, complete sequence
          Length = 207515

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    aggaagcaaagaaagaagta 409
              ||||||||||||||||||||
Sbjct: 181529 aggaagcaaagaaagaagta 181510
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>gb|AC100149.12| Mus musculus chromosome 10, clone RP23-43F3, complete sequence
          Length = 184927

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 389   gaggaagcaaagaaagaagtatct 412
             ||||||||||||||||||| ||||
Sbjct: 66658 gaggaagcaaagaaagaagaatct 66635
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>gb|AC124157.4| Equus caballus clone CH241-37P10, complete sequence
          Length = 193986

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 372    ttccgggttctcttgttgaggaag 395
              |||| |||||||||||||||||||
Sbjct: 110971 ttccaggttctcttgttgaggaag 110994
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>gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, complete sequence
          Length = 105166

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 322   gaaaattgagactgcatttaaggatttg 349
             ||||||||||| || |||||||||||||
Sbjct: 44615 gaaaattgagagtgaatttaaggatttg 44588
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>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   tccgcaggtcggcggcggcg 181
             ||||||||||||||||||||
Sbjct: 30707 tccgcaggtcggcggcggcg 30688
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>gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosome 9, complete sequence
          Length = 160241

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   agcaaagaaagaagtatcta 413
             ||||||||||||||||||||
Sbjct: 14456 agcaaagaaagaagtatcta 14475
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>gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome 9, complete sequence
          Length = 157105

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    agcaaagaaagaagtatcta 413
              ||||||||||||||||||||
Sbjct: 146373 agcaaagaaagaagtatcta 146392
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>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence
          Length = 147599

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ttgaggaagcaaagaaagaa 406
             ||||||||||||||||||||
Sbjct: 58602 ttgaggaagcaaagaaagaa 58583
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>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 aggaagcaaagaaagaagta 409
           ||||||||||||||||||||
Sbjct: 819 aggaagcaaagaaagaagta 800
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>gb|AC153809.2| Homo sapiens chromosome 2 clone fa0884, complete sequence
          Length = 20593

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 219   gcctgggatcctgcgtcacccgag 242
             |||||||||||||| |||||||||
Sbjct: 13494 gcctgggatcctgcatcacccgag 13471
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>gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 88326

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 322   gaaaattgagactgcatttaaggatttg 349
             ||||||||||| || |||||||||||||
Sbjct: 64313 gaaaattgagagtgaatttaaggatttg 64340
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>gb|AC144450.2| Homo sapiens fosmid clone XXFOS-8097D7 from 2, complete sequence
          Length = 17376

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 219   gcctgggatcctgcgtcacccgag 242
             |||||||||||||| |||||||||
Sbjct: 10372 gcctgggatcctgcatcacccgag 10395
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>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete
             sequence
          Length = 212406

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   acatctgcctccaatatctg 317
             ||||||||||||||||||||
Sbjct: 95288 acatctgcctccaatatctg 95307
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>dbj|AK129581.1| Homo sapiens cDNA FLJ26070 fis, clone PRS09374
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 219 gcctgggatcctgcgtcacccgag 242
           |||||||||||||| |||||||||
Sbjct: 459 gcctgggatcctgcatcacccgag 482
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>gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, complete sequence
          Length = 155366

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   aggaagcaaagaaagaagta 409
             ||||||||||||||||||||
Sbjct: 82519 aggaagcaaagaaagaagta 82500
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 372    ttccgggttctcttgttgaggaag 395
              |||| |||||||||||||||||||
Sbjct: 943974 ttccaggttctcttgttgaggaag 943997


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,185,575
Number of Sequences: 3902068
Number of extensions: 3185575
Number of successful extensions: 75611
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75234
Number of HSP's gapped (non-prelim): 377
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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