>PAG1_PIG (Q29078) Pregnancy-associated glycoprotein 1 precursor (EC|
           3.4.23.-) (PAG 1)
          Length = 389

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +1

Query: 130 RSKSFKKSRGASCSLPLLLLIGAVQFLVIGKPFPSLLMDSSRRAFFNLAEEEFIPEP 300
           R KS  ++ G S S P+  L  A    V+G  +PSL +  +   F NL ++  IPEP
Sbjct: 155 RFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEP 211

>PDXA_PSEPK (Q88QT5) 4-hydroxythreonine-4-phosphate dehydrogenase (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine
           dehydrogenase)
          Length = 329

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
 Frame = -2

Query: 426 VXRGGAAARGHDEHLRRAPADADGAGHLAVVGSRVVEVAAHLWLRD--ELLLCEIEEGPP 253
           +   G A  GH E L      A     LA  G RV  V  HL LRD  + +  E  E   
Sbjct: 126 INESGIAFSGHTEFLAELTRTAQVVMMLATRGLRVALVTTHLPLRDVADAITAERVERVT 185

Query: 252 AAIHQERRKR 223
             +H + R +
Sbjct: 186 RILHADMRDK 195

>CYLN2_RAT (O55156) Cytoplasmic linker protein 2 (Cytoplasmic linker protein|
           115) (CLIP-115)
          Length = 1046

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 330 SRVVEVAAHLWLR----DELLLCEIEEGPPAAIHQERRKRLADHQELDRPDEQQQGEA 169
           SRV+++   L LR    +EL  C ++ GPP A H E  + L   + L    ++ Q ++
Sbjct: 504 SRVLQLEEELSLRRGEIEELQHCLLQSGPPPADHPEAAETLRLRERLLSASKEHQRDS 561

>CYLN2_MOUSE (Q9Z0H8) Cytoplasmic linker protein 2 (Cytoplasmic linker protein|
           115) (CLIP-115)
          Length = 1047

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 330 SRVVEVAAHLWLR----DELLLCEIEEGPPAAIHQERRKRLADHQELDRPDEQQQGEA 169
           SRV+++   L LR    +EL  C ++ GPP A H E  + L   + L    ++ Q ++
Sbjct: 504 SRVLQLEEELSLRRGEIEELQHCLLQSGPPPADHPEAAETLRLRERLLSASKEHQRDS 561

>LPXD_CHRVO (Q7NVY4) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -2

Query: 432 HDVXRGGAAARGHDEHLRR-APADADGAGHLAVVGS-----RVVEVAAHLWLRDELLLCE 271
           H V + G A RG +  + R AP +  GAG +A V S     +++E AA   +  E L  E
Sbjct: 7   HIVKQLGGALRGPNREVSRLAPLELAGAGEIAFVASAKFRRQMLESAADALIVTEALAAE 66

Query: 270 IEE 262
           + +
Sbjct: 67  LPD 69

>RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2141

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 280  EEFIPEPQVSCDFNDTRSDY 339
            ++F+ E Q  CDFND R++Y
Sbjct: 1694 QKFLEEGQDKCDFNDVRANY 1713

>FKBX_SHIFL (P0AEM3) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase (EC|
           5.2.1.8) (PPIase) (Rotamase)
          Length = 148

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 217 GKPFPSLLMDSSRRAFFNLAEEEFIPEPQVSCDFNDTRSDYCEMTGAIR-IRGSTSEVFV 393
           G P P L+   SRR F +        EP++      T  D  EM G IR I G +  V  
Sbjct: 71  GVPSPDLIQYFSRREFMDAG------EPEIGAIMLFTAMDGSEMPGVIREINGDSITVDF 124

Query: 394 MTPRRGTT 417
             P  G T
Sbjct: 125 NHPLAGQT 132

>FKBX_ECOLI (P0AEM0) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase (EC|
           5.2.1.8) (PPIase) (Rotamase)
          Length = 148

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 217 GKPFPSLLMDSSRRAFFNLAEEEFIPEPQVSCDFNDTRSDYCEMTGAIR-IRGSTSEVFV 393
           G P P L+   SRR F +        EP++      T  D  EM G IR I G +  V  
Sbjct: 71  GVPSPDLIQYFSRREFMDAG------EPEIGAIMLFTAMDGSEMPGVIREINGDSITVDF 124

Query: 394 MTPRRGTT 417
             P  G T
Sbjct: 125 NHPLAGQT 132

>FKBX_ECOL6 (P0AEM1) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase (EC|
           5.2.1.8) (PPIase) (Rotamase)
          Length = 148

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 217 GKPFPSLLMDSSRRAFFNLAEEEFIPEPQVSCDFNDTRSDYCEMTGAIR-IRGSTSEVFV 393
           G P P L+   SRR F +        EP++      T  D  EM G IR I G +  V  
Sbjct: 71  GVPSPDLIQYFSRREFMDAG------EPEIGAIMLFTAMDGSEMPGVIREINGDSITVDF 124

Query: 394 MTPRRGTT 417
             P  G T
Sbjct: 125 NHPLAGQT 132

>FKBX_ECO57 (P0AEM2) FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase (EC|
           5.2.1.8) (PPIase) (Rotamase)
          Length = 148

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 217 GKPFPSLLMDSSRRAFFNLAEEEFIPEPQVSCDFNDTRSDYCEMTGAIR-IRGSTSEVFV 393
           G P P L+   SRR F +        EP++      T  D  EM G IR I G +  V  
Sbjct: 71  GVPSPDLIQYFSRREFMDAG------EPEIGAIMLFTAMDGSEMPGVIREINGDSITVDF 124

Query: 394 MTPRRGTT 417
             P  G T
Sbjct: 125 NHPLAGQT 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,944,843
Number of Sequences: 219361
Number of extensions: 1062197
Number of successful extensions: 3176
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3174
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)