| Clone Name | bast61e07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 283 gagttcatcccggagccacaggtgagctgcgacttcaacgacacgagatccgactactgc 342 ||||||||||||||||| || || | |||||||||| |||| ||||||||| ||| Sbjct: 29357867 gagttcatcccggagcctcacctgcgatgcgacttcagagacaatagatccgacgtgtgc 29357808 Query: 343 gagatgaccggcgccatccgcatccgcgggagcacgtcggaggtgttc 390 |||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 29357807 gagatggagggcgccatccgcatcctcggccgcacgtcggaggtgttc 29357760 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 178 ctgctgctgctcatcggggcggtccagttcttggtgat 215 ||||| |||||||||| ||| |||||||||||||||| Sbjct: 29358469 ctgctcctgctcatcgtggcaatccagttcttggtgat 29358432 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 17673792 gcgacgtggatcgccgccac 17673811
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 283 gagttcatcccggagccacaggtgagctgcgacttcaacgacacgagatccgactactgc 342 ||||||||||||||||| || || | |||||||||| |||| ||||||||| ||| Sbjct: 68748 gagttcatcccggagcctcacctgcgatgcgacttcagagacaatagatccgacgtgtgc 68689 Query: 343 gagatgaccggcgccatccgcatccgcgggagcacgtcggaggtgttc 390 |||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 68688 gagatggagggcgccatccgcatcctcggccgcacgtcggaggtgttc 68641 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 178 ctgctgctgctcatcggggcggtccagttcttggtgat 215 ||||| |||||||||| ||| |||||||||||||||| Sbjct: 69350 ctgctcctgctcatcgtggcaatccagttcttggtgat 69313
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 283 gagttcatcccggagccacaggtgagctgcgacttcaacgacacgagatccgactactgc 342 ||||||||||||||||| || || | |||||||||| |||| ||||||||| ||| Sbjct: 120665 gagttcatcccggagcctcacctgcgatgcgacttcagagacaatagatccgacgtgtgc 120606 Query: 343 gagatgaccggcgccatccgcatccgcgggagcacgtcggaggtgttc 390 |||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 120605 gagatggagggcgccatccgcatcctcggccgcacgtcggaggtgttc 120558 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 178 ctgctgctgctcatcggggcggtccagttcttggtgat 215 ||||| |||||||||| ||| |||||||||||||||| Sbjct: 121267 ctgctcctgctcatcgtggcaatccagttcttggtgat 121230
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 134003 acgcgacgtggatcgccgccac 134024
>ref|XM_386252.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06076.1) partial mRNA Length = 858 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 catgcagcctccccctgctgct 185 |||||||||||||||||||||| Sbjct: 243 catgcagcctccccctgctgct 264
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 25336 acgcgacgtggatcgccgccac 25315
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 140805 acgcgacgtggatcgccgccac 140784
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 29638116 acgcgacgtggatcgccgccac 29638095 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 25057801 gcgacgtggatcgccgccac 25057820
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 675150 acgcgacgtggatcgccgccac 675171 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23689560 gcgacgtggatcgccgccac 23689579 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23465631 gcgacgtggatcgccgccac 23465650 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 22036071 gcgacgtggatcgccgccac 22036090
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 24066136 acgcgacgtggatcgccgccac 24066157 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gaggagcaagagcttcaagaagagc 153 |||||||||||||| |||||||||| Sbjct: 26301528 gaggagcaagagctccaagaagagc 26301504 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 16382650 gcgacgtggatcgccgccac 16382631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 3219396 gcgacgtggatcgccgccac 3219377
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 16262177 acgcgacgtggatcgccgccac 16262156
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 20145503 acgcgacgtggatcgccgccac 20145482 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 1753554 gcgacgtggatcgccgccac 1753573
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 28245178 acgcgacgtggatcgccgccac 28245199 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 34785898 gcgacgtggatcgccgccac 34785917 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 32910623 gcgacgtggatcgccgccac 32910604 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23202003 gcgacgtggatcgccgccac 23202022
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 78693 acgcgacgtggatcgccgccac 78672
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 11289 acgcgacgtggatcgccgccac 11268
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 92049 acgcgacgtggatcgccgccac 92028
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 36935 acgcgacgtggatcgccgccac 36956
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 24377805 acgcgacgtggatcgccgccac 24377826 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gaggagcaagagcttcaagaagagc 153 |||||||||||||| |||||||||| Sbjct: 26615786 gaggagcaagagctccaagaagagc 26615762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 16472629 gcgacgtggatcgccgccac 16472610 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 3228101 gcgacgtggatcgccgccac 3228082
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 675150 acgcgacgtggatcgccgccac 675171 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23617748 gcgacgtggatcgccgccac 23617767 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23393822 gcgacgtggatcgccgccac 23393841 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 21964416 gcgacgtggatcgccgccac 21964435
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acgcgacgtggatcgccgccac 460 |||||||||||||||||||||| Sbjct: 103984 acgcgacgtggatcgccgccac 103963
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gaggagcaagagcttcaagaagagc 153 |||||||||||||| |||||||||| Sbjct: 3360 gaggagcaagagctccaagaagagc 3336
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gaggagcaagagcttcaagaagagc 153 |||||||||||||| |||||||||| Sbjct: 103177 gaggagcaagagctccaagaagagc 103153
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 tgctgctgctcatcggggcgg 199 ||||||||||||||||||||| Sbjct: 78980 tgctgctgctcatcggggcgg 79000
>gb|AE010399.1| Methanopyrus kandleri AV19 section 98 of 157 of the complete genome Length = 10475 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 tgtagcagctccgcggccctctcc 76 |||| ||||||||||||||||||| Sbjct: 594 tgtatcagctccgcggccctctcc 617
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 95589 gcgacgtggatcgccgccac 95608
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 59468 gcgacgtggatcgccgccac 59487
>ref|XM_361068.1| Magnaporthe grisea 70-15 hypothetical protein (MG03611.4) partial mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 gccttcttcaatctcgcagaggag 282 ||||||||| |||||||||||||| Sbjct: 676 gccttcttcgatctcgcagaggag 699
>gb|AY641834.1| Gekko japonicus GekBS013P mRNA, complete cds Length = 1569 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 agcagcaggagggccttctt 266 |||||||||||||||||||| Sbjct: 1102 agcagcaggagggccttctt 1083
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 22224 gcgacgtggatcgccgccac 22205
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tgatcggcaagccttttccg 231 |||||||||||||||||||| Sbjct: 4046521 tgatcggcaagccttttccg 4046502
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 31928090 gcgacgtggatcgccgccac 31928109 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 22082255 gcgacgtggatcgccgccac 22082274
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 123085 gcgacgtggatcgccgccac 123066
>gb|AC010266.9| Homo sapiens chromosome 5 clone CTC-471C19, complete sequence Length = 129071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tgcagcctccccctgctgct 185 |||||||||||||||||||| Sbjct: 72911 tgcagcctccccctgctgct 72930
>gb|AF525283.1| Methylococcus capsulatus MmoC (mmoC) gene, partial cds; and MmoG (mmoG), MmoQ (mmoQ), MmoS (mmoS), and MmoR (mmoR) genes, complete cds Length = 10494 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gatgaccggcgccatccgca 364 |||||||||||||||||||| Sbjct: 8426 gatgaccggcgccatccgca 8407
>emb|BX957251.3| Zebrafish DNA sequence from clone CH211-152L15 in linkage group 23, complete sequence Length = 120410 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 caagagcttcaagaagagca 154 |||||||||||||||||||| Sbjct: 71359 caagagcttcaagaagagca 71378
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 9383 gcgacgtggatcgccgccac 9402
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctgctgctgctcatcggggc 197 |||||||||||||||||||| Sbjct: 110957 ctgctgctgctcatcggggc 110938
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 20042 gcgacgtggatcgccgccac 20061
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 23341069 gcgacgtggatcgccgccac 23341088 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 17800407 gcgacgtggatcgccgccac 17800426
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 4304861 gcgacgtggatcgccgccac 4304880
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 32018603 gcgacgtggatcgccgccac 32018622 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 22075284 gcgacgtggatcgccgccac 22075303
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 39454941 gcgacgtggatcgccgccac 39454960 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 30205783 gcgacgtggatcgccgccac 30205802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 20457467 gcgacgtggatcgccgccac 20457486
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gatgaccggcgccatccgca 364 |||||||||||||||||||| Sbjct: 1267152 gatgaccggcgccatccgca 1267133
>gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete sequence Length = 145138 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tgatggatagcagcaggagg 258 |||||||||||||||||||| Sbjct: 106746 tgatggatagcagcaggagg 106765
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttctacttgaggaatgcgtt 37 |||||||||||||||||||| Sbjct: 176837 ttctacttgaggaatgcgtt 176818
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 66027 gcgacgtggatcgccgccac 66008
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 113582 gcgacgtggatcgccgccac 113601
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 110605 gcgacgtggatcgccgccac 110624
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 29955 gcgacgtggatcgccgccac 29974
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 27399 gcgacgtggatcgccgccac 27418
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 35915 gcgacgtggatcgccgccac 35934
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 22293 gcgacgtggatcgccgccac 22312
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 96327 gcgacgtggatcgccgccac 96346
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 103746 gcgacgtggatcgccgccac 103765
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 65364 gcgacgtggatcgccgccac 65345
>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1288_C01 Length = 111223 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 51690 gcgacgtggatcgccgccac 51709
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 105160 gcgacgtggatcgccgccac 105179
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 7493 gcgacgtggatcgccgccac 7512
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 59234 gcgacgtggatcgccgccac 59253
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ccctgctgctgctcatcggggcgg 199 ||||||||||||||||||| |||| Sbjct: 144616 ccctgctgctgctcatcggcgcgg 144593
>gb|AC162298.4| Mus musculus chromosome 1, clone RP24-285P15, complete sequence Length = 138146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttctacttgaggaatgcgtt 37 |||||||||||||||||||| Sbjct: 7466 ttctacttgaggaatgcgtt 7447
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 16850 gcgacgtggatcgccgccac 16831
>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69648 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 6273 gcgacgtggatcgccgccac 6292
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 66061 gcgacgtggatcgccgccac 66042
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 5228 gcgacgtggatcgccgccac 5247
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 36528 gcgacgtggatcgccgccac 36509
>gb|AC004528.1|AC004528 Homo sapiens chromosome 19, cosmid R32184, complete sequence Length = 47066 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ctccctctgaggagcaagag 140 |||||||||||||||||||| Sbjct: 16821 ctccctctgaggagcaagag 16802
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gcgacgtggatcgccgccac 460 |||||||||||||||||||| Sbjct: 129340 gcgacgtggatcgccgccac 129359
>emb|AL671426.6| Mouse DNA sequence from clone RP23-107F15 on chromosome X, complete sequence Length = 123745 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gagttcatcccggagccaca 302 |||||||||||||||||||| Sbjct: 111501 gagttcatcccggagccaca 111520 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,458,852 Number of Sequences: 3902068 Number of extensions: 3458852 Number of successful extensions: 63120 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62074 Number of HSP's gapped (non-prelim): 1046 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)