>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related|
           transcription factor A) (MRTF-A) (Megakaryoblastic
           leukemia 1 protein) (Megacaryocytic acute leukemia
           protein)
          Length = 931

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = +1

Query: 91  NKHTDTRAGSS-HPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVA 267
           NK+ D+   SS  P  PS    + APAP+A  +L H   PL     S       +L    
Sbjct: 673 NKNADSPGLSSGSPQQPSSQPGSPAPAPSAQMDLEHPLQPLFGTPTS-------LLKKEP 725

Query: 268 PGLDTSTGVQSKDVDLGAYSARL 336
           PG + +   Q K  + G+ S ++
Sbjct: 726 PGYEEAMSQQPKQQENGSSSQQM 748

>CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclear protein|
           NP94)
          Length = 898

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 41  RNKYTATPISSGDPTQRTNTQTQEPAPLTPRP 136
           RN  TA   SSG P  + NTQ + P+ +T RP
Sbjct: 853 RNALTALFTSSGRPPSQPNTQDKTPSKVTARP 884

>MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Modulator of|
           transcription protein 3) (Hypoxic gene repressor protein
           7)
          Length = 490

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
 Frame = +1

Query: 121 SHPPAP----SIMASNTAPAPAADDELLHE 198
           +HPPAP    + +ASN  PAP++D + +H+
Sbjct: 318 NHPPAPVPSSNPVASNLVPAPSSDHKYIHQ 347

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 85   PANKHTDTRAGSSHPPAPSIMASNTAPAPAADDELLHEFGPL 210
            P  K      G +  PAP++++S+++ + + DD L    GP+
Sbjct: 937  PRRKRRSLGLGPAPDPAPALVSSSSSSSSSEDDRLRRPLGPM 978

>2A5D_HUMAN (Q14738) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
           subunit delta isoform (PP2A, B subunit, B' delta
           isoform) (PP2A, B subunit, B56 delta isoform) (PP2A, B
           subunit, PR61 delta isoform) (PP2A, B subunit, R5 delta
           isoform)
          Length = 602

 Score = 26.2 bits (56), Expect(2) = 2.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 26  PPEIPRNKYTATPISSGDPTQRTNTQTQEPAPL-TPRPRA 142
           PP++   K TA P SSG      NT+  +P P   P+P+A
Sbjct: 11  PPKVA--KCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQA 48



 Score = 22.3 bits (46), Expect(2) = 2.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 121 SHPPAPSIMASNTAPAPAADDELLHEFGP 207
           S PP+ +   SN+ P P    ++ +  GP
Sbjct: 50  SQPPSSNKRPSNSTPPPTQLSKIKYSGGP 78

>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
 Frame = +3

Query: 6   RSRDAFSLRRSQETNTPRRLFHPEI-------PPSEQTHRHKSRLLSPPGP 137
           RSR   S  RS  + +P R   P          P+ +  RH S  ++PPGP
Sbjct: 290 RSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAHRPRRHSSSRVNPPGP 340

>VTP3_TTV1V (P19275) Viral protein TPX|
          Length = 474

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = +2

Query: 8   FARCLFPPEIPRNKYTATPISSGDPTQRTNTQTQEPAPLTPRP 136
           +A  +  P  P  + T TPISS  PT  T T T  P P TP P
Sbjct: 254 YANFIVLPYEPDPQVTVTPISSPSPTP-TPTPTPTPTP-TPTP 294

>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein|
            kinase with no lysine 1) (Protein kinase,
            lysine-deficient 1)
          Length = 2126

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
 Frame = +1

Query: 124  HPPAPSIMASNTAPAPAADD---------ELLHEFGPLLRVYKSGRLERPLVLPPVAPGL 276
            H   P + A   + AP  DD          L  E       + S  LE PLV+  V PG+
Sbjct: 1375 HTHCPEMDADTQSKAPGIDDIKTLEEKLRSLFSEHSSSGTQHASVSLETPLVVETVTPGI 1434

Query: 277  DTSTGVQSK 303
             T+    SK
Sbjct: 1435 PTTAVAPSK 1443

>MYOD1_HUMAN (P15172) Myoblast determination protein 1 (Myogenic factor 3)|
           (Myf-3)
          Length = 319

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +2

Query: 38  PRNKYTATPI---SSGDPTQRTNTQTQEPAPLTPRP 136
           PR +  A P    SSGDPTQ  +   Q PA   P P
Sbjct: 279 PRRQEAAAPSEGESSGDPTQSPDAAPQCPAGANPNP 314

>BORG4_MOUSE (Q9JM96) Cdc42 effector protein 4 (Binder of Rho GTPases 4)|
          Length = 349

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
 Frame = +1

Query: 13  AMPFPSGDPKKQIHRDAYFIRRSHPAN--KHTDTRAGSSHPPAPSIMASNTAPAPAADDE 186
           AM  P  + K+   +D+  + +S  ++  K  D R G    P       N A  P + D 
Sbjct: 114 AMSLPQLNEKEAAEKDSSKLPKSLSSSPVKKADARDGGPKSPH-----RNGATGPHSPDP 168

Query: 187 LLHE--FGPLLRVYKSGRLERPLVLPPVAPGLDTSTGVQSKDVDLG 318
           LL E  FG L+ +          ++P V+ GL  +  + S  +DLG
Sbjct: 169 LLDEQAFGDLMDLP---------IMPKVSYGLKHAESILSFHIDLG 205

>YBES_ECOLI (P77381) Hypothetical J-domain protein ybeS|
          Length = 475

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +1

Query: 109 RAGSSHPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTST 288
           R  SSHP   ++  +        DD  LH    LLR Y +GRL+ P +L       +T  
Sbjct: 191 RIWSSHPQWLTLYLAQHRAVIIPDDAKLHR--NLLRWYSAGRLDIPELLDYAQSWRETEP 248

Query: 289 GVQSKDVDLGAYSARLY 339
              ++D     Y+ R+Y
Sbjct: 249 --DNEDAPYYEYAQRVY 263

>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 707

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = +1

Query: 82  HPANKHTDT-RAGSSHPPAPSIMASNTAPAPAADD-------ELLHEFGPLLRVYKSGRL 237
           HP    T    AG + PP  S  A+ TA    A+D       + + E G  L V+K GR 
Sbjct: 480 HPTTSPTGAPSAGPTGPPTASPSAAPTASLDPAEDVCNVNVFDAIAEIGNKLHVFKDGRY 539

Query: 238 ER 243
            R
Sbjct: 540 WR 541

>ANC1_HUMAN (Q9H1A4) Anaphase-promoting complex subunit 1 (APC1) (Cyclosome|
           subunit 1) (Protein Tsg24) (Mitotic checkpoint
           regulator)
          Length = 1944

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +1

Query: 130 PAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTS 285
           PAPS+  SNT P P+   + +    PL ++   G L+  ++L PV    D+S
Sbjct: 515 PAPSLTMSNTMPRPSTPLDGVSTPKPLSKLL--GSLDEVVLLSPVPELRDSS 564

>KKQ8_YEAST (P36004) Probable serine/threonine-protein kinase YKL168C (EC|
           2.7.11.1)
          Length = 734

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 10  RAMPFPSGDPKKQIHRDAYFIRRSHP 87
           RA  +P+  P KQ + +  + RRSHP
Sbjct: 219 RATSYPNPLPSKQFYNERLYTRRSHP 244

>SMAP1_HUMAN (Q8IYB5) Stromal membrane-associated protein 1|
          Length = 467

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +1

Query: 115 GSSHPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTSTGV 294
           G   P    +   NT   P  DD  L  FGP++       +  P    P AP   T + V
Sbjct: 220 GLDGPAVAPVTNGNTTVPPLNDD--LDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTV 277

Query: 295 QSKDVDL 315
            S D+DL
Sbjct: 278 TSGDLDL 284

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = +2

Query: 2   TPFARCLFP--PEIPRN--KYTATPISSGDPTQRTNTQTQEPAPLTPRPRA 142
           +P AR   P  P +P    +  + P     P  R  +++  PAP TPRPR+
Sbjct: 273 SPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRS 323

>L100_ADEG1 (Q64760) Late 100 kDa protein|
          Length = 984

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 94   KHTDTRAGSSHPPAPS-IMASNTAPAPAADD 183
            +H  T   +S PPAPS I+A  T P+P   D
Sbjct: 950  EHPTTSPSASEPPAPSRILARGTPPSPERRD 980

>HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy|
           and enhancer of split related 1) (HESR-1)
           (Cardiovascular helix-loop-helix factor 2) (HES-related
           repressor protein 2) (HERP2)
          Length = 304

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = +1

Query: 85  PANKHTDTRAGSSHPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPV 264
           P   H   R GS+HP AP++ A  +              GP+L V  S     P +L  V
Sbjct: 210 PTEPHHQGRLGSAHPEAPALRAPPSG-----------SLGPVLPVVTSASKLSPPLLSSV 258

Query: 265 A 267
           A
Sbjct: 259 A 259

>HAL4_SCHPO (O14019) Serine/threonine-protein kinase hal4 (EC 2.7.11.1)|
           (Halotolerence protein 4)
          Length = 636

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 44  NKYTATPISSGDPTQRTNTQTQEPAPLTPRPRA 142
           N+ TA P  S +P++  ++ + +PA ++P P A
Sbjct: 102 NQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAA 134

>HAM_DROME (Q8I7Z8) Transcription factor hamlet|
          Length = 990

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +1

Query: 103 DTRAGSSHPPAPSIMASNTA----PAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAP 270
           DT +G   P   SI    +A     APA D+ +LH F P L  +++ R  +PL +     
Sbjct: 621 DTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFEAER-GQPLKMRKSHS 679

Query: 271 GLDTSTGVQS 300
             ++ST  +S
Sbjct: 680 SAESSTSQKS 689

>FNBA_STAAU (P14738) Fibronectin-binding protein precursor (FNBP)|
          Length = 1018

 Score = 25.0 bits (53), Expect(2) = 7.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 29  PEIPRNKYTATPISSGDPTQRTNTQTQEPAPLTP 130
           PE+P    T TP     PT    ++ + P P TP
Sbjct: 898 PEVPSEPETPTP-----PTPEVPSEPETPTPPTP 926



 Score = 21.6 bits (44), Expect(2) = 7.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 127 PPAPSIMASNTAPAPAADDE 186
           PP P + A    P P A +E
Sbjct: 923 PPTPEVPAEPGKPVPPAKEE 942

>ZN281_HUMAN (Q9Y2X9) Zinc finger protein 281 (Zinc finger DNA-binding protein|
           99) (Transcription factor ZBP-99) (GC-box-binding zinc
           finger protein 1)
          Length = 895

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 112 AGSSHPPAPSIMASNTAPAPAAD 180
           AGS+ PP   +++S+T+ APAA+
Sbjct: 67  AGSAAPPPQCVLSSSTSAAPAAE 89

>EST1_RAT (P10959) Liver carboxylesterase 1 precursor (EC 3.1.1.1)|
           (Carboxyesterase ES-1) (E1) (ES-THET) (Esterase-2)
          Length = 549

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 283 STGVQSKDVDLGAYSARLYLPXXXXXXXXXKLPVIVYVHGGGFV 414
           STG +S  ++       L +          +LPV+V++HGGG +
Sbjct: 102 STGKESIPLEFSEDCLYLNIYSPADLTKNSRLPVMVWIHGGGLI 145

>EST2_CAEEL (Q07085) Esterase CM06B1 (EC 3.1.1.1)|
          Length = 556

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 310 DLGAYSARLYLPXXXXXXXXXKLPVIVYVHGGGF 411
           + G  +  ++ P           PV+VY+HGGG+
Sbjct: 94  EAGCLTLNVFTPRNASSEFKNGRPVMVYIHGGGY 127

>CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56)|
          Length = 510

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 103 DTRAGSSHPPAPSIMASNTAPAPAADD 183
           +++  S  PPAP ++ + TAPAP   D
Sbjct: 276 ESKPVSLPPPAPPVVVTTTAPAPVLPD 302

>ABL1_MOUSE (P00520) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)|
            (p150) (c-ABL) (Abelson murine leukemia viral oncogene
            homolog 1)
          Length = 1123

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 26   PPEIPRNKYTATPISSGDPTQRTNTQTQEPAP 121
            PP +P+ + TA P   G PT   +T +  PAP
Sbjct: 952  PPSVPKPQSTAKP--PGTPTSPVSTPSTAPAP 981

>KPB2_FUGRU (Q9W6R1) Phosphorylase b kinase alpha regulatory chain, liver|
           isoform (Phosphorylase kinase alpha L subunit)
          Length = 1229

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 9   SRDAFS-LRRSQETNTPRRLFHPEIPPSEQTHRHKSRLLSPPGPEH 143
           +RD  S + + Q  N P+   +  + P +  HR    LL  P P+H
Sbjct: 699 TRDILSFMAQVQGLNVPKSSMYLPVTPLKSKHRRSLNLLDVPHPQH 744

>ABL_MLVAB (P00521) Tyrosine-protein kinase transforming protein Abl (EC|
           2.7.10.2) (V-abl)
          Length = 746

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 26  PPEIPRNKYTATPISSGDPTQRTNTQTQEPAP 121
           PP +P+ + TA P   G PT   +T +  PAP
Sbjct: 575 PPSVPKPQSTAKP--PGTPTSPVSTPSTAPAP 604


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,082,391
Number of Sequences: 219361
Number of extensions: 753043
Number of successful extensions: 3692
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3677
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)