ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum... 32 1.0
2PLK2_HUMAN (Q9NYY3) Serine/threonine-protein kinase PLK2 (EC 2.7... 31 1.8
3TOP1_BACSU (P39814) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 29 6.7
4MAGI2_HUMAN (Q86UL8) Membrane-associated guanylate kinase, WW an... 29 6.7
5PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3,... 29 6.7
6G6PD_SYNY3 (P73411) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 29 6.7
7SPTB1_MOUSE (P15508) Spectrin beta chain, erythrocyte (Beta-I sp... 29 6.7

>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 1   LQTLLPSTATKAVPGARQPRDLTSPSSKAPG 93
           L T++PS  TK  P  +QPR L SPS  + G
Sbjct: 533 LSTVVPSMGTKPKPAGQQPRVLLSPSIPSVG 563



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>PLK2_HUMAN (Q9NYY3) Serine/threonine-protein kinase PLK2 (EC 2.7.11.21)|
           (Polo-like kinase 1) (PLK-2) (Serine/threonine-protein
           kinase SNK) (Serum-inducible kinase)
          Length = 685

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +2

Query: 2   SKLSFPPQPQKPSLELASQETSPHLAPRHQAHH 100
           SK   PPQP + S    SQ   P  AP H  HH
Sbjct: 30  SKKKRPPQPPEESQPPQSQAQVPPAAPHHHHHH 62



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>TOP1_BACSU (P39814) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 691

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 348 ILDKLDGYELAPASWSEVSKAL 413
           ILD+L GY+++P  W +V K L
Sbjct: 141 ILDRLVGYKISPILWKKVKKGL 162



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>MAGI2_HUMAN (Q86UL8) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 2 (Membrane-associated
            guanylate kinase inverted 2) (MAGI-2)
            (Atrophin-1-interacting protein 1)
            (Atrophin-1-interacting protein A)
          Length = 1455

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 10   LLPSTATKAVPGARQPRDLTSPSSKAPGAPWVARALRKWRWQRLPTALRPPASP 171
            LL    T  VP   +P   +SP++ APG P V  +L        P+   PP+ P
Sbjct: 1223 LLLKRGTGQVPEYDEPAPWSSPAAAAPGLPEVGVSLDDGLAPFSPSHPAPPSDP 1276



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>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast|
           precursor
          Length = 374

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 10  LLPSTATKAVPGARQPRDLTSPSSKAPGAPWVARALRKWRW-QRLPTALRPPASP 171
           LLPS    +  G+R+P  L   SS+ P     A +     W  R P+A  PP+ P
Sbjct: 17  LLPSPTIHSSTGSRRPFRLPLRSSRRPPVAAAAASGVPDEWGDRSPSAPEPPSQP 71



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>G6PD_SYNY3 (P73411) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 509

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 31  KAVPGARQPRDLTSPSSKAPGAPWVARALRKWRWQRLPTALR 156
           K VPG R+   +  PSS  P    +   +  WRWQ +P  LR
Sbjct: 316 KPVPGYREEPGV-DPSSTTPTFAALKLMVDNWRWQGVPFYLR 356



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>SPTB1_MOUSE (P15508) Spectrin beta chain, erythrocyte (Beta-I spectrin)|
          Length = 2127

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 348  ILDKLDGYELAPASWSEVSKALEDIKP-TLDSKQRRTP 458
            ++ + + +E + ASW+E   ALE  KP TL+ K+R+TP
Sbjct: 2037 LIKRHEAFEKSTASWAERFAALE--KPTTLELKERQTP 2072


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.127    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,460,315
Number of Sequences: 219361
Number of extensions: 742563
Number of successful extensions: 2386
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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