| Clone Name | bast61d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188668.1| Oryza sativa (japonica cultivar-group), Ozsa8271 predicted mRNA Length = 1176 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 351 ctcgacaagctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcc 410 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 223 ctcgacaagctcgacggctacgacctcgcgccggcgtcgtggtcggaggtcagcaaggcc 282 Query: 411 cttgaagacatcaagcctacgctc 434 || || |||||||||||| ||||| Sbjct: 283 ctggaggacatcaagcctgcgctc 306 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 143 ctaccgccctccggccaccagcgtctccctgttcgacatcagcgctgtcgaggagccgtg 202 ||||||||| ||| | || |||||||| ||||||||||||||||| |||||||||| || Sbjct: 42 ctaccgcccgccgccgacgagcgtctcgctgttcgacatcagcgccatcgaggagccctg 101 Query: 203 gctcatcgc 211 ||||||||| Sbjct: 102 gctcatcgc 110
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 351 ctcgacaagctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcc 410 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 7516536 ctcgacaagctcgacggctacgacctcgcgccggcgtcgtggtcggaggtcagcaaggcc 7516595 Query: 411 cttgaagacatcaagcctacgctc 434 || || |||||||||||| ||||| Sbjct: 7516596 ctggaggacatcaagcctgcgctc 7516619 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 143 ctaccgccctccggccaccagcgtctccctgttcgacatcagcgctgtcgaggagccgtg 202 ||||||||| ||| | || |||||||| ||||||||||||||||| |||||||||| || Sbjct: 7516355 ctaccgcccgccgccgacgagcgtctcgctgttcgacatcagcgccatcgaggagccctg 7516414 Query: 203 gctcatcgc 211 ||||||||| Sbjct: 7516415 gctcatcgc 7516423
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 351 ctcgacaagctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcc 410 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 65328 ctcgacaagctcgacggctacgacctcgcgccggcgtcgtggtcggaggtcagcaaggcc 65387 Query: 411 cttgaagacatcaagcctacgctc 434 || || |||||||||||| ||||| Sbjct: 65388 ctggaggacatcaagcctgcgctc 65411 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 143 ctaccgccctccggccaccagcgtctccctgttcgacatcagcgctgtcgaggagccgtg 202 ||||||||| ||| | || |||||||| ||||||||||||||||| |||||||||| || Sbjct: 65147 ctaccgcccgccgccgacgagcgtctcgctgttcgacatcagcgccatcgaggagccctg 65206 Query: 203 gctcatcgc 211 ||||||||| Sbjct: 65207 gctcatcgc 65215
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcccttgaag 417 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| || | Sbjct: 27278949 agctcgacggccacgacctcgcgccgacgtcgtggtcggaggtcagcaaggccctggagg 27279008 Query: 418 acatcaagcctacgctcgactccaa 442 |||||||||||||||| ||||||| Sbjct: 27279009 tcatcaagcctacgctcaactccaa 27279033 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ccaccaccggcgtggcgctc 344 |||||||||||||||||||| Sbjct: 28491771 ccaccaccggcgtggcgctc 28491790 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gccgccgccgccaacggcga 241 |||||||||||||||||||| Sbjct: 25612863 gccgccgccgccaacggcga 25612844
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcccttgaag 417 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| || | Sbjct: 135965 agctcgacggccacgacctcgcgccgacgtcgtggtcggaggtcagcaaggccctggagg 136024 Query: 418 acatcaagcctacgctcgactccaa 442 |||||||||||||||| ||||||| Sbjct: 136025 tcatcaagcctacgctcaactccaa 136049
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcccttgaag 417 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| || | Sbjct: 21776 agctcgacggccacgacctcgcgccgacgtcgtggtcggaggtcagcaaggccctggagg 21835 Query: 418 acatcaagcctacgctcgactccaa 442 |||||||||||||||| ||||||| Sbjct: 21836 tcatcaagcctacgctcaactccaa 21860
>gb|AY023444.1| Oryza sativa microsatellite MRG5769 containing (TCC)X8, closest to marker C955, genomic sequence Length = 224 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 351 ctcgacaagctcgacggctacgagctcgcgccggcgtcgtggtccgaggtgagcaaggcc 410 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 60 ctcgacaagctcgacggctacgacctcgcgccggcgtcgtggtcggaggtcagcaaggcc 1 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 162 agcgtctccctgttcgacatcagcgctgtcgaggagccgtggctcatcgc 211 |||||||| ||||||||||||||||| |||||||||| ||||||||||| Sbjct: 222 agcgtctcgctgttcgacatcagcgccatcgaggagccctggctcatcgc 173
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 83.8 bits (42), Expect = 5e-13 Identities = 77/88 (87%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtcc---gaggtgagcaaggcccttg 414 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 3665 agctcgacggccacgacctcgcgccgacgtcgtggtcgtcggaggtcagcaaggccctgg 3606 Query: 415 aagacatcaagcctacgctcgactccaa 442 | |||||||||||||||||| ||||||| Sbjct: 3605 aggacatcaagcctacgctcaactccaa 3578
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 83.8 bits (42), Expect = 5e-13 Identities = 77/88 (87%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtcc---gaggtgagcaaggcccttg 414 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 100735 agctcgacggccacgacctcgcgccgacgtcgtggtcgtcggaggtcagcaaggccctgg 100676 Query: 415 aagacatcaagcctacgctcgactccaa 442 | |||||||||||||||||| ||||||| Sbjct: 100675 aggacatcaagcctacgctcaactccaa 100648
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 5e-13 Identities = 77/88 (87%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 358 agctcgacggctacgagctcgcgccggcgtcgtggtcc---gaggtgagcaaggcccttg 414 ||||||||||| |||| ||||||||| |||||||||| ||||| ||||||||||| | Sbjct: 29963983 agctcgacggccacgacctcgcgccgacgtcgtggtcgtcggaggtcagcaaggccctgg 29963924 Query: 415 aagacatcaagcctacgctcgactccaa 442 | |||||||||||||||||| ||||||| Sbjct: 29963923 aggacatcaagcctacgctcaactccaa 29963896 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccgccaacggcg 240 |||||||||||||||||||| Sbjct: 33614829 cgccgccgccgccaacggcg 33614848
>ref|XM_801284.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507077.40) partial mRNA Length = 1119 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggagga 304 ||||||||||||||||||||||||| | |||||| Sbjct: 398 acgaagacgacgatgaagaggaggaggaggagga 431
>ref|XM_457616.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B15499g) partial mRNA Length = 6642 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 261 gatgacgaatacgaagacgacgatgaaga 289 ||||||||| ||||||||||||||||||| Sbjct: 2791 gatgacgaagacgaagacgacgatgaaga 2819
>emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on chromosome 10 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 65508 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| ||||||||||||||| Sbjct: 41236 gaagaggaggatgaggaggaagagcagga 41208
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 261 gatgacgaatacgaagacgacgatgaaga 289 ||||||||| ||||||||||||||||||| Sbjct: 1212398 gatgacgaagacgaagacgacgatgaaga 1212370
>gb|BC067193.1| Danio rerio high-mobility group box 1, mRNA (cDNA clone MGC:77104 IMAGE:6960667), complete cds Length = 1320 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||||||||||||||| Sbjct: 584 acgaagacgacgatgaagaggagga 608
>ref|NM_111606.1| Arabidopsis thaliana unknown protein AT3G07260 mRNA, complete cds Length = 914 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggat 296 |||||||||||||||||||||||| Sbjct: 499 gaagacgacgatgaagaggaggat 522
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 282 gatgaagaggaggatgcggaggaagagcagga 313 |||||||||||||||| |||||||||||||| Sbjct: 139342 gatgaagaggaggatgaagaggaagagcagga 139311
>gb|AY372124.1| Plasmodium falciparum MC_var3 erythrocyte membrane protein 1 (var) gene, complete cds Length = 8146 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggagga 295 |||||||||||||||||||| ||||| ||||| Sbjct: 5595 gacgaatacgaagacgacgaagaagaagagga 5626
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggat 296 |||||||||||||||||||||||| Sbjct: 24581 gaagacgacgatgaagaggaggat 24558
>gb|AC006729.1| Caenorhabditis elegans cosmid Y24D9A, complete sequence Length = 41172 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 278 cgacgatgaagaggaggatgcggagga 304 |||||||||||||||||||| |||||| Sbjct: 32191 cgacgatgaagaggaggatgaggagga 32165
>gb|AY648710.1| Danio rerio PRDM5 mRNA, complete cds Length = 2675 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcaggaca 315 |||||||||||| ||||||||||||||||| Sbjct: 555 gaagaggaggatctggaggaagagcaggaca 585
>emb|CR690226.2|CNS0FVJ2 Tetraodon nigroviridis full-length cDNA Length = 768 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcaggaca 315 ||||||||||||| |||||||||| |||||| Sbjct: 392 gaagaggaggatgaggaggaagaggaggaca 422
>ref|XM_795701.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC593996 (LOC593996), partial mRNA Length = 295 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatg 297 |||| |||||||||||||||||||||| Sbjct: 131 acgacgacgacgatgaagaggaggatg 157
>ref|NM_135461.2| Drosophila melanogaster CG4364-RA (CG4364), mRNA Length = 2123 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggagga 295 ||||||||||||||||||||||| Sbjct: 1663 gaagacgacgatgaagaggagga 1685
>gb|AY069545.1| Drosophila melanogaster LD27336 full length cDNA Length = 2141 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggagga 295 ||||||||||||||||||||||| Sbjct: 1663 gaagacgacgatgaagaggagga 1685
>ref|NM_171319.3| Caenorhabditis elegans Y24D9A.1b (Y24D9A.1) mRNA, complete cds Length = 1863 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 278 cgacgatgaagaggaggatgcggagga 304 |||||||||||||||||||| |||||| Sbjct: 322 cgacgatgaagaggaggatgaggagga 296
>ref|NM_171318.3| Caenorhabditis elegans Y24D9A.1a (Y24D9A.1) mRNA, complete cds Length = 2358 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 278 cgacgatgaagaggaggatgcggagga 304 |||||||||||||||||||| |||||| Sbjct: 322 cgacgatgaagaggaggatgaggagga 296
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggagga 295 ||||||||||||||||||||||| Sbjct: 110884 gaagacgacgatgaagaggagga 110906
>ref|NM_001002301.1| Danio rerio PR domain containing 5 (prdm5), mRNA Length = 2675 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcaggaca 315 |||||||||||| ||||||||||||||||| Sbjct: 555 gaagaggaggatctggaggaagagcaggaca 585
>ref|NM_001011450.1| Xenopus tropicalis hypothetical LOC496939 (LOC496939), mRNA Length = 855 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 cgatgaagaggaggatgcggagg 303 ||||||||||||||||||||||| Sbjct: 423 cgatgaagaggaggatgcggagg 445
>emb|CR626935.6| Zebrafish DNA sequence from clone CH211-81A5 in linkage group 19, complete sequence Length = 166134 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaaga 307 ||||||||||||||||||||||| Sbjct: 36548 gaagaggaggatgcggaggaaga 36570
>gb|AC157376.2| Medicago truncatula chromosome 7 BAC clone mth2-70d8, complete sequence Length = 87346 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 282 gatgaagaggaggatgcggaggaagag 308 |||||||||||||||| |||||||||| Sbjct: 52264 gatgaagaggaggatgaggaggaagag 52238
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 acgccgccgccgccaacggcgac 242 ||||||||||||||||||||||| Sbjct: 590 acgccgccgccgccaacggcgac 612
>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete sequence Length = 264919 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggagga 295 ||||||||||||||||||||||| Sbjct: 519 gaagacgacgatgaagaggagga 497
>emb|CR761481.2| Xenopus tropicalis finished cDNA, clone TGas070p17 Length = 939 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 cgatgaagaggaggatgcggagg 303 ||||||||||||||||||||||| Sbjct: 515 cgatgaagaggaggatgcggagg 537
>gb|BC088544.1| Xenopus tropicalis hypothetical LOC496939, mRNA (cDNA clone MGC:97690 IMAGE:6983481), complete cds Length = 855 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 cgatgaagaggaggatgcggagg 303 ||||||||||||||||||||||| Sbjct: 423 cgatgaagaggaggatgcggagg 445
>gb|AF009151.1|AF009151 Leishmania tarentolae DNA polymerase alpha gene, partial cds Length = 924 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 agacgacgatgaagaggaggatg 297 ||||||||||||||||||||||| Sbjct: 525 agacgacgatgaagaggaggatg 547
>gb|AF009146.1|AF009146 Leishmania hoogstraali DNA polymerase alpha gene, partial cds Length = 924 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 agacgacgatgaagaggaggatg 297 ||||||||||||||||||||||| Sbjct: 525 agacgacgatgaagaggaggatg 547
>gb|AF009143.1|AF009143 Sauroleishmania gymnodactyli DNA polymerase alpha gene, partial cds Length = 924 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 agacgacgatgaagaggaggatg 297 ||||||||||||||||||||||| Sbjct: 525 agacgacgatgaagaggaggatg 547
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcggaggaagagca 310 ||||| |||||||||||||| | |||||||||||| Sbjct: 2022167 gacgaggatgaagaggaggaagaggaggaagagca 2022133
>gb|BC075733.1| Mus musculus centromere autoantigen B, mRNA (cDNA clone MGC:78363 IMAGE:30286478), complete cds Length = 2626 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1566 gacgatgaagaggaggatgaggagga 1591
>ref|XM_873365.1| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 8 (LOC538680), mRNA Length = 5836 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1557 gacgacgaggaagaggaggaagaggaggaagaggagga 1594
>ref|XM_873268.1| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 7 (LOC538680), mRNA Length = 3952 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1688 gacgacgaggaagaggaggaagaggaggaagaggagga 1725
>ref|XM_873165.1| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 6 (LOC538680), mRNA Length = 6034 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1755 gacgacgaggaagaggaggaagaggaggaagaggagga 1792
>ref|XM_873065.1| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 5 (LOC538680), mRNA Length = 5830 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1551 gacgacgaggaagaggaggaagaggaggaagaggagga 1588
>ref|XM_872961.1| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 4 (LOC538680), mRNA Length = 3317 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1658 gacgacgaggaagaggaggaagaggaggaagaggagga 1695
>ref|XM_581979.2| PREDICTED: Bos taurus similar to B-cell CLL/lymphoma 11A isoform 1, transcript variant 1 (LOC538680), mRNA Length = 5967 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| ||||||||||| | |||||||||| |||| Sbjct: 1688 gacgacgaggaagaggaggaagaggaggaagaggagga 1725
>gb|BC003104.1| Homo sapiens leucine zipper, down-regulated in cancer 1, mRNA (cDNA clone MGC:1897 IMAGE:3503444), complete cds Length = 1411 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 478 gacgaagacgacgacgacgaagaagaggaggatg 511
>ref|NM_007682.2| Mus musculus centromere autoantigen B (Cenpb), mRNA Length = 2809 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1691 gacgatgaagaggaggatgaggagga 1716
>ref|XM_714556.1| Candida albicans SC5314 putative clathrin-associated protein AP-1 complex component (CaO19_9625), mRNA Length = 2010 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagagga 292 |||||||||||||||||||||| Sbjct: 1007 acgaagacgacgatgaagagga 1028
>ref|XM_714432.1| Candida albicans SC5314 putative clathrin-associated protein AP-1 complex component (CaO19_2078), mRNA Length = 2010 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagagga 292 |||||||||||||||||||||| Sbjct: 1007 acgaagacgacgatgaagagga 1028
>ref|XM_001003970.1| PREDICTED: Mus musculus centromere autoantigen B (Cenpb), mRNA Length = 6173 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1483 gacgatgaagaggaggatgaggagga 1508
>ref|XM_918270.2| PREDICTED: Mus musculus sperm flagellar 1, transcript variant 2 (Spef1), mRNA Length = 4899 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 27 gacgatgaagaggaggatgaggagga 52
>gb|BC006628.1| Mus musculus centromere autoantigen B, mRNA (cDNA clone MGC:11737 IMAGE:3968847), complete cds Length = 2090 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1581 gacgatgaagaggaggatgaggagga 1606
>ref|XM_789557.1| PREDICTED: Strongylocentrotus purpuratus similar to Cat eye syndrome critical region protein 2 (LOC589929), mRNA Length = 576 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatg 297 |||||||||||||||||||||| Sbjct: 193 gacgacgatgaagaggaggatg 214
>emb|AL109799.7|HSBG82I1 Human DNA sequence from clone GS1-82I1 on chromosome Xq26.3-27.3 Contains a CGI-79 protein (CGI-79) pseudogene, the SPANXC gene for SPANX family, member C, the LDOC1 gene for leucine zipper down-regulated in cancer 1 and a CpG island, complete sequence Length = 127046 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 122382 gacgaagacgacgacgacgaagaagaggaggatg 122415
>emb|X55038.1|MMCENPB Mouse mCENP-B gene for centromere autoantigen B (CENP-B) Length = 3840 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 2544 gacgatgaagaggaggatgaggagga 2569
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 ggaggatgcggaggaagagcag 311 |||||||||||||||||||||| Sbjct: 269930 ggaggatgcggaggaagagcag 269951
>gb|BC053333.1| Mus musculus centromere autoantigen B, mRNA (cDNA clone MGC:58961 IMAGE:6399142), complete cds Length = 2809 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1691 gacgatgaagaggaggatgaggagga 1716
>gb|AF440695.1| Virus PhiCh1, complete genome Length = 58498 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 acgacgatgaagaggaggatgcggag 302 |||||||||| ||||||||||||||| Sbjct: 32726 acgacgatgacgaggaggatgcggag 32751
>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163090 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaagag 308 |||| |||||||| ||||||||||| | |||||||||| Sbjct: 55156 acgacgacgacgacgaagaggaggaggaggaggaagag 55119
>emb|CR609965.1| full-length cDNA clone CS0DN002YE21 of Adult brain of Homo sapiens (human) Length = 1380 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 543 gacgaagacgacgacgacgaagaagaggaggatg 576
>ref|NM_131978.1| Drosophila melanogaster CG15465-RA (CG15465), mRNA Length = 1269 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaagag 308 |||| |||||||| ||||||||||| | |||||||||| Sbjct: 929 acgacgacgacgacgaagaggaggaggaggaggaagag 966
>dbj|AK158811.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430331D04 product:centromere autoantigen B, full insert sequence Length = 1311 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 280 gacgatgaagaggaggatgaggagga 305
>emb|CR457088.1| Homo sapiens full open reading frame cDNA clone RZPDo834E057D for gene LDOC1, leucine zipper, down-regulated in cancer 1; complete cds, incl. stopcodon Length = 441 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 400 gacgaagacgacgacgacgaagaagaggaggatg 433
>gb|BT022700.1| Drosophila melanogaster IP12315 full insert cDNA Length = 1982 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaagag 308 |||| |||||||| ||||||||||| | |||||||||| Sbjct: 1176 acgacgacgacgacgaagaggaggaggaggaggaagag 1213
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgtcaaggc 250 |||||||||||| ||||||||| ||||||| Sbjct: 3804807 cgccgccgccgcgaacggcgacctcaaggc 3804778
>ref|XM_218846.3| PREDICTED: Rattus norvegicus ring finger and KH domain containing 3 (predicted) (Rkhd3_predicted), mRNA Length = 3450 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| | ||| |||||||| |||||||||||||| Sbjct: 2957 gacgacgaggcagatgaggatgccgaggaagagcagga 2920
>gb|BC048844.1| Mus musculus DEK oncogene (DNA binding), mRNA (cDNA clone IMAGE:5037306), partial cds Length = 918 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagagga 292 |||||||||||||||||||||| Sbjct: 227 acgaagacgacgatgaagagga 248
>gb|BC071269.1| Mus musculus centromere autoantigen B, mRNA (cDNA clone MGC:78359 IMAGE:6333993), complete cds Length = 2827 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 1746 gacgatgaagaggaggatgaggagga 1771
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaggatgcggaggaagagcag 311 |||||||||||||||||||||| Sbjct: 1952147 ggaggatgcggaggaagagcag 1952126
>ref|NM_012317.2| Homo sapiens leucine zipper, down-regulated in cancer 1 (LDOC1), mRNA Length = 1388 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 504 gacgaagacgacgacgacgaagaagaggaggatg 537
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaagag 308 |||| |||||||| ||||||||||| | |||||||||| Sbjct: 156494 acgacgacgacgacgaagaggaggaggaggaggaagag 156531
>gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, complete sequence Length = 182283 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 aggaagagcaggacactcagaa 322 |||||||||||||||||||||| Sbjct: 80670 aggaagagcaggacactcagaa 80649
>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete sequence Length = 126358 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 279 gacgatgaagaggaggatgcggagga 304 ||||||||||||||||||| |||||| Sbjct: 109944 gacgatgaagaggaggatgaggagga 109919
>dbj|AB019527.1| Homo sapiens mRNA for LDOC1 protein, complete cds Length = 1370 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagaggaggatg 297 |||||| |||| |||||||| ||||||||||||| Sbjct: 504 gacgaagacgacgacgacgaagaagaggaggatg 537
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 170614 gaagaggaggaagaggaggaagagcagga 170586
>gb|AY398358.1| Danio rerio clone RK074A1B06 high-mobility group box 1 (HMGB1) mRNA, complete cds Length = 1422 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||| ||||||||||| Sbjct: 757 acgaagacgacgacgaagaggagga 781
>ref|XM_515227.1| PREDICTED: Pan troglodytes LOC458945 (LOC458945), mRNA Length = 2505 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1438 gacgacgaggaagaggaggatgccgagga 1466
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence Length = 214959 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 3302 gaggtgggcaaggcccttgaaggcatcaa 3274
>ref|XM_510639.1| PREDICTED: Pan troglodytes similar to EH-domain containing protein 4 (FKSG7 protein) (Hepatocellular carcinoma-associated protein 10/11) (LOC453708), mRNA Length = 1167 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 891 caagctcgacggctacgagct 911
>gb|AC167202.8| Mus musculus BAC RP24-243A15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180658 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| || |||||||| | |||||||||| |||| Sbjct: 72163 gaagacgacgacgacgaggaggaggaggaggaagaggagga 72203
>ref|NM_194693.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0020E23.10), mRNA Length = 1728 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 1614 cgaatacgaagacgacgatga 1634
>ref|XM_463109.1| Oryza sativa (japonica cultivar-group), mRNA Length = 234 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 63 gaagacgacgacgaagaggaggaggaggaggaggaggagga 23
>gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome 16, complete sequence Length = 206061 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 actctccttccctccacagcc 27 ||||||||||||||||||||| Sbjct: 170021 actctccttccctccacagcc 170041
>ref|XM_470372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3053 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 106 cgccgccgccgccaacagcgacgtc 82
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 32116 gaagaggaggaagaggaggaagagcagga 32144
>ref|NM_001016736.2| Xenopus tropicalis hypothetical protein LOC549490 (LOC549490), mRNA Length = 937 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggagga 304 ||||||||||||||||||||| Sbjct: 296 tgaagaggaggatgcggagga 316
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 acgaagacgacgatgaagaggagga 295 |||| |||||||||||||||||||| Sbjct: 430062 acgacgacgacgatgaagaggagga 430038
>gb|AY115494.1| Mus musculus suprabasal-specific protein suprabasin mRNA, complete cds Length = 2277 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 166 gaggtgggcaaggcccttgaaggcatcaa 194
>gb|AY023507.1| Oryza sativa microsatellite MRG5832 containing (TCT)X12, closest to marker C1122, genomic sequence Length = 236 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 105 gaagacgacgacgaagaggaggaggaggaggaggaggagga 65
>gb|AY023443.1| Oryza sativa microsatellite MRG5768 containing (TCC)X8, closest to marker C1122, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 141 gaagacgacgacgaagaggaggaggaggaggaggaggagga 101
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 138468 gaagacgacgacgaagaggaggaggaggaggaggaggagga 138508
>ref|XM_877198.1| PREDICTED: Bos taurus hypothetical protein LOC614386 (LOC614386), partial mRNA Length = 428 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||| ||||||||||| Sbjct: 172 acgaagacgacgaggaagaggagga 196
>gb|AC168276.3| Mus musculus BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186675 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 19546 gaagaggaggaaggggaggaagagcagga 19518
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 88461 gacgacgatgacgaggaggatgcgg 88485
>ref|XM_618000.2| PREDICTED: Bos taurus similar to POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1) (LOC537815), mRNA Length = 1179 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 473 gaagaggaggatgaggaggaagaggagga 445
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 13996 cgccgccgccgccaacagcgacgtc 14020
>gb|BC051531.1| Mus musculus suprabasin, mRNA (cDNA clone IMAGE:3465387), complete cds Length = 765 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 236 gaggtgggcaaggcccttgaaggcatcaa 264
>gb|AY444556.1| Mus musculus suprabasin precursor short isoform mRNA, complete cds Length = 693 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 166 gaggtgggcaaggcccttgaaggcatcaa 194
>gb|BC051823.1| Homo sapiens EH-domain containing 4, mRNA (cDNA clone MGC:60080 IMAGE:4944876), complete cds Length = 2901 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1593 caagctcgacggctacgagct 1613
>gb|BC001595.1| Homo sapiens 5'-nucleotidase, cytosolic II, mRNA (cDNA clone MGC:1109 IMAGE:3543103), complete cds Length = 3364 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| || |||||||||||||| | ||||||||| Sbjct: 1790 acgaagatgatgatgaagaggaggaggaggaggaaga 1826
>ref|XM_957645.1| Neurospora crassa OR74A hypothetical protein (NCU07638.1) partial mRNA Length = 2418 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 agacgacgatgaagaggagga 295 ||||||||||||||||||||| Sbjct: 2370 agacgacgatgaagaggagga 2390
>ref|XM_328343.1| Neurospora crassa OR74A hypothetical protein (NCU07638.1) partial mRNA Length = 2418 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 agacgacgatgaagaggagga 295 ||||||||||||||||||||| Sbjct: 2370 agacgacgatgaagaggagga 2390
>gb|AC129580.14| Mus musculus chromosome 14, clone RP24-149P3, complete sequence Length = 185100 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| |||||||||||| |||| Sbjct: 31195 gaagaggaggaagcggaggaagaggagga 31167
>ref|XM_658457.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5945.2), mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 264 gacgaatacgaagacgacgatgaagagga 292 |||||| |||||||||| ||||||||||| Sbjct: 307 gacgaagacgaagacgaagatgaagagga 335
>ref|XM_654478.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1966.2), mRNA Length = 12069 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 261 gatgacgaatacgaagacgacgatgaagaggaggatg 297 ||||| ||| ||||||||||||| ||||| ||||||| Sbjct: 7351 gatgatgaagacgaagacgacgacgaagacgaggatg 7387
>ref|NM_139265.2| Homo sapiens EH-domain containing 4 (EHD4), mRNA Length = 2941 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1589 caagctcgacggctacgagct 1609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 35013095 cgccgccgccgccaacagcgacgtc 35013119 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 22210350 gaagacgacgacgaagaggaggaggaggaggaggaggagga 22210310 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcagaacgccgccgccgcca 234 |||||||||||||||||||| Sbjct: 18381276 gcagaacgccgccgccgcca 18381295
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 atgaagaggaggatgcggaggaaga 307 ||||||||||||||| ||||||||| Sbjct: 123484 atgaagaggaggatgaggaggaaga 123508
>gb|AC117610.7| Mus musculus chromosome 1, clone RP23-102B12, complete sequence Length = 191587 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 131231 tgaagaggaggatgcagaggaagag 131207
>gb|BC047527.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein 2, mRNA (cDNA clone MGC:33760 IMAGE:5277237), complete cds Length = 3306 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1470 gacgacgaggaagaggaggatgccgagga 1498
>gb|BT011197.1| Drosophila melanogaster GH26440 full insert cDNA Length = 6988 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2328 gacgacgatgacgaggaggatgcgg 2304
>gb|DQ483993.1| Gymnogyps californianus clone 159G microsatellite sequence Length = 541 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaa 305 ||||||||||||||||||||| Sbjct: 6 gaagaggaggatgcggaggaa 26
>ref|XM_858780.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 10 (LOC476639), mRNA Length = 3682 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 655 gaagaggaggatgaggaggaagagc 679
>ref|XM_858759.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 9 (LOC476639), mRNA Length = 3769 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 655 gaagaggaggatgaggaggaagagc 679
>ref|XM_858739.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 8 (LOC476639), mRNA Length = 2394 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 655 gaagaggaggatgaggaggaagagc 679
>ref|XM_858718.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 7 (LOC476639), mRNA Length = 1562 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 696 gaagaggaggatgaggaggaagagc 720
>ref|XM_858693.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 6 (LOC476639), mRNA Length = 991 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 655 gaagaggaggatgaggaggaagagc 679
>ref|XM_858672.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 5 (LOC476639), mRNA Length = 3905 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 818 gaagaggaggatgaggaggaagagc 842
>ref|XM_858649.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 4 (LOC476639), mRNA Length = 3824 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 737 gaagaggaggatgaggaggaagagc 761
>ref|XM_858624.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 3 (LOC476639), mRNA Length = 3722 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 635 gaagaggaggatgaggaggaagagc 659
>ref|XM_858604.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 2 (LOC476639), mRNA Length = 3742 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 655 gaagaggaggatgaggaggaagagc 679
>ref|XM_533844.2| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 1 (LOC476639), mRNA Length = 3876 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 789 gaagaggaggatgaggaggaagagc 813
>ref|XM_857850.1| PREDICTED: Canis familiaris similar to Jumonji domain containing protein 2A, transcript variant 4 (LOC482530), mRNA Length = 3299 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 |||||||||||||| |||||||||| Sbjct: 1425 tgaagaggaggatgaggaggaagag 1449
>ref|XM_539647.2| PREDICTED: Canis familiaris similar to Jumonji domain containing protein 2A, transcript variant 1 (LOC482530), mRNA Length = 3398 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 |||||||||||||| |||||||||| Sbjct: 1425 tgaagaggaggatgaggaggaagag 1449
>ref|XM_857801.1| PREDICTED: Canis familiaris similar to Jumonji domain containing protein 2A, transcript variant 3 (LOC482530), mRNA Length = 3350 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 |||||||||||||| |||||||||| Sbjct: 1425 tgaagaggaggatgaggaggaagag 1449
>ref|XM_845912.1| PREDICTED: Canis familiaris similar to Jumonji domain containing protein 2A, transcript variant 2 (LOC482530), mRNA Length = 3311 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 |||||||||||||| |||||||||| Sbjct: 1425 tgaagaggaggatgaggaggaagag 1449
>ref|XM_568617.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01480) partial mRNA Length = 2463 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 |||| |||||||||||||||||||| Sbjct: 1160 acgacgacgacgatgaagaggagga 1184
>ref|XM_806958.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506267.90) partial mRNA Length = 834 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 260 tgatgacgaatacgaagacgacgatgaagaggaggatgcggaggaagag 308 |||||| ||| | ||||| || |||||||||||||||| ||||||||| Sbjct: 363 tgatgatgaagaggaagaggaggatgaagaggaggatgaagaggaagag 411
>gb|AC126242.3| Mus musculus BAC clone RP24-249E21 from chromosome 10, complete sequence Length = 177581 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 26411 gaagaggaggaggaggaggaagagcagga 26383
>ref|XM_811020.1| Trypanosoma cruzi strain CL Brener Zn-finger protein (Tc00.1047053509669.40) partial mRNA Length = 2535 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatg 297 |||||||||||||| |||||||||| Sbjct: 823 gaagacgacgatgaggaggaggatg 847
>gb|BC060118.1| Mus musculus zinc finger protein 142, mRNA (cDNA clone MGC:64753 IMAGE:6406631), complete cds Length = 6108 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 1083 tgaagaggaggatgcagaggaagag 1107
>emb|Z81525.1|CEF33A8 Caenorhabditis elegans Cosmid F33A8, complete sequence Length = 30782 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 tgacgaatacgaagacgacgatgaa 287 |||||||| |||||||||||||||| Sbjct: 6125 tgacgaatccgaagacgacgatgaa 6101
>ref|XM_804744.1| Trypanosoma cruzi strain CL Brener Zn-finger protein (Tc00.1047053509617.89) partial mRNA Length = 1101 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatg 297 |||||||||||||| |||||||||| Sbjct: 826 gaagacgacgatgaggaggaggatg 850
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 atgaagaggaggatgcggaggaaga 307 ||||||||||||||| ||||||||| Sbjct: 151851 atgaagaggaggatgaggaggaaga 151875
>ref|XM_759282.1| Theileria parva strain Muguga chromosome 4 eukaryotic translation initiation factor 3 subunit 8 (TP04_0739) partial mRNA Length = 2856 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagag 308 ||||| |||||||||||||| || ||||||||| Sbjct: 565 gacgaggatgaagaggaggaggctgaggaagag 597
>ref|XM_738132.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000071.00.0) partial mRNA Length = 2766 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatg 297 |||||||||||||||||||| |||| Sbjct: 997 gaagacgacgatgaagaggaagatg 1021
>emb|CR654774.1|CNS0F470 Tetraodon nigroviridis full-length cDNA Length = 1679 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggaggaaga 307 ||||||||||||||||| | ||||||||| Sbjct: 1436 gacgatgaagaggaggaggaggaggaaga 1464
>emb|CR643474.2|CNS0EVH4 Tetraodon nigroviridis full-length cDNA Length = 1650 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggaggaaga 307 ||||||||||||||||| | ||||||||| Sbjct: 1424 gacgatgaagaggaggaggaggaggaaga 1452
>gb|AC159304.2| Mus musculus BAC clone RP23-211E20 from chromosome 13, complete sequence Length = 195948 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 192135 gaagaggaggatgaggaggaagaggagga 192107
>gb|AC161221.7| Mus musculus chromosome 1, clone RP24-228M19, complete sequence Length = 164548 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 24774 gaagaggaggaggaggaggaagagcagga 24802
>gb|AC166553.2| Nectria haematococca clone JGIAYWI-9O2, complete sequence Length = 38247 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 279 gacgatgaagaggaggatgcggaggaaga 307 |||||||||||||| |||| ||||||||| Sbjct: 19992 gacgatgaagaggacgatgaggaggaaga 19964
>gb|BC077716.1| Homo sapiens cDNA clone IMAGE:5020413, containing frame-shift errors Length = 2882 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1571 caagctcgacggctacgagct 1591
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggaggaagag 308 |||||||||||| ||||||| | |||||||||| Sbjct: 169635 gacgacgatgaaaaggaggaggaggaggaagag 169667
>ref|XM_502449.1| Yarrowia lipolytica CLIB122, YALI0D05577g predicted mRNA Length = 1737 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| ||||| ||||||||||| | ||||||||| Sbjct: 1334 acgaagatgacgacgaagaggaggaagtggaggaaga 1370
>ref|XM_504035.1| Yarrowia lipolytica CLIB122, YALI0E16731g predicted mRNA Length = 3645 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 1603 gaagaggaggatgaggaggaagaggagga 1631
>emb|AL139817.9| Human DNA sequence from clone RP11-30H12 on chromosome 10 Contains the 3' end of the CNNM2 gene for cyclin M2 and the 3' end of the NT5C2 gene for cytosolic 5'-nucleotidase II, complete sequence Length = 47422 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| || |||||||||||||| | ||||||||| Sbjct: 27956 acgaagatgatgatgaagaggaggaggaggaggaaga 27920
>ref|XM_788902.1| PREDICTED: Strongylocentrotus purpuratus similar to delangin isoform A (LOC589254), mRNA Length = 5805 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 |||||||||||||||| |||||||| Sbjct: 5756 acgaagacgacgatgacgaggagga 5780
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 1674419 cgaatacgaagacgacgatga 1674399
>emb|CR860693.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0927 (from clone DKFZp459D0927) Length = 3860 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 751 gaagaggaggatgaggaggaagagc 775
>emb|CR858999.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0316 (from clone DKFZp459C0316) Length = 2628 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gacgatgaagaggaggatgcggaggaaga 307 ||||||||||||||||||| |||||||| Sbjct: 1562 gacgatgaagaggaggatgaagaggaaga 1590
>emb|CR858337.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2032 (from clone DKFZp459D2032) Length = 4089 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 901 gaagaggaggatgaggaggaagagc 925
>dbj|AK127670.1| Homo sapiens cDNA FLJ45768 fis, clone NETRP2000961, highly similar to Cytosolic purine 5'-nucleotidase (EC 3.1.3.5) Length = 2625 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| || |||||||||||||| | ||||||||| Sbjct: 1830 acgaagatgatgatgaagaggaggaggaggaggaaga 1866
>gb|AC138526.23| Medicago truncatula clone mth2-17n24, complete sequence Length = 124531 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||||||||| ||||| Sbjct: 59854 acgaagacgacgatgaagatgagga 59878
>ref|NM_134300.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RC, transcript variant C (Rbp9), mRNA Length = 3427 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2385 gacgacgatgacgaggaggatgcgg 2361
>ref|NM_134299.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RF, transcript variant F (Rbp9), mRNA Length = 3412 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2370 gacgacgatgacgaggaggatgcgg 2346
>ref|NM_134298.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RE, transcript variant E (Rbp9), mRNA Length = 3402 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2360 gacgacgatgacgaggaggatgcgg 2336
>ref|NM_134297.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RB, transcript variant B (Rbp9), mRNA Length = 3417 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2375 gacgacgatgacgaggaggatgcgg 2351
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 71516 cgaatacgaagacgacgatga 71496
>ref|NM_057589.2| Drosophila melanogaster RNA-binding protein 9 CG3151-RA, transcript variant A (Rbp9), mRNA Length = 3495 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2453 gacgacgatgacgaggaggatgcgg 2429
>ref|NM_057588.2| Drosophila melanogaster RNA-binding protein 9 CG3151-RD, transcript variant D (Rbp9), mRNA Length = 3480 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2438 gacgacgatgacgaggaggatgcgg 2414
>ref|NM_001014462.1| Drosophila melanogaster RNA-binding protein 9 CG3151-RG, transcript variant G (Rbp9), mRNA Length = 6958 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 2328 gacgacgatgacgaggaggatgcgg 2304
>dbj|AK132550.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831430K24 product:zinc finger protein 142, full insert sequence Length = 7473 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 1148 tgaagaggaggatgcagaggaagag 1172
>ref|NM_139124.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein 2 (MAPK8IP2), transcript variant 3, mRNA Length = 2271 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 397 gacgacgaggaagaggaggatgccgagga 425
>ref|NM_016431.2| Homo sapiens mitogen-activated protein kinase 8 interacting protein 2 (MAPK8IP2), transcript variant 2, mRNA Length = 3216 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1342 gacgacgaggaagaggaggatgccgagga 1370
>ref|NM_012324.2| Homo sapiens mitogen-activated protein kinase 8 interacting protein 2 (MAPK8IP2), transcript variant 1, mRNA Length = 3414 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1540 gacgacgaggaagaggaggatgccgagga 1568
>gb|AF332092.1| Mus musculus strain ILS zinc finger 142 (Znf142) mRNA, complete cds Length = 5019 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 435 tgaagaggaggatgcagaggaagag 459
>gb|AF332091.1| Mus musculus strain ISS zinc finger 142 (Znf142) mRNA, complete cds Length = 5018 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 435 tgaagaggaggatgcagaggaagag 459
>gb|AF218778.1| Homo sapiens islet-brain 2 mRNA, complete cds Length = 2394 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1342 gacgacgaggaagaggaggatgccgagga 1370
>ref|NM_012229.2| Homo sapiens 5'-nucleotidase, cytosolic II (NT5C2), mRNA Length = 3364 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| || |||||||||||||| | ||||||||| Sbjct: 1790 acgaagatgatgatgaagaggaggaggaggaggaaga 1826
>gb|AF454953.1|AF454953 Homo sapiens EH domain-containing protein-4 mRNA, complete cds Length = 2890 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1589 caagctcgacggctacgagct 1609
>gb|U19615.1|CEU19615 Caenorhabditis elegans Nucampholin (let-858) mRNA, complete cds Length = 2806 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 tgacgaatacgaagacgacgatgaa 287 |||||||| |||||||||||||||| Sbjct: 2126 tgacgaatccgaagacgacgatgaa 2102
>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete sequence Length = 157533 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 92896 gaagaggaggatgaggaggaagaggagga 92924
>gb|AY060253.1| Drosophila melanogaster GH07919 full length cDNA Length = 2438 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 1380 gacgacgatgacgaggaggatgcgg 1356
>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete sequence Length = 150294 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 64575 gaagaggaggatgaggaggaagaggagga 64603
>gb|AC174742.8| Mus musculus BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163118 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| || |||||||| | |||||||||| |||| Sbjct: 13484 gaagacgacgacgacgaggaggaggaggaggaagaggagga 13444
>gb|S68987.1| set=Set beta isoform {alternatively spliced} [rats, neonatal kidney, mRNA, 2026 nt] Length = 2026 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 |||| |||||||||||||||||||| Sbjct: 812 acgatgacgacgatgaagaggagga 836
>gb|S68589.1| set=Set alpha isoform {alternatively spliced} [rats, neonatal kidney, mRNA, 2010 nt] Length = 2010 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 |||| |||||||||||||||||||| Sbjct: 796 acgatgacgacgatgaagaggagga 820
>gb|S55886.1| Drosophila melanogaster RRM9 (rbp9) gene, complete cds Length = 11347 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 9198 gacgacgatgacgaggaggatgcgg 9174
>dbj|AK081760.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130074J11 product:hypothetical Glycine-rich region containing protein, full insert sequence Length = 1497 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 162 gaggtgggcaaggcccttgaaggcatcaa 190
>gb|AF307137.1|AF307137 Homo sapiens EH domain-containing protein FKSG7 (FKSG7) mRNA, complete cds Length = 1985 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1590 caagctcgacggctacgagct 1610
>gb|AF233348.1|AF233348 Macaca mulatta neuronal phosphoprotein DARPP-32 mRNA, partial cds Length = 296 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 |||||||| || ||||||||||||| ||||||||| |||| Sbjct: 106 gaagacgaggaggaagaggaggatgatgaggaagaggagga 146
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcggaggaagag 308 |||||||||||| ||||||| | |||||||||| Sbjct: 114479 gacgacgatgaaaaggaggaggaggaggaagag 114447
>ref|NM_063962.4| Caenorhabditis elegans LEThal family member (let-858) (let-858) mRNA, complete cds Length = 2806 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 tgacgaatacgaagacgacgatgaa 287 |||||||| |||||||||||||||| Sbjct: 2126 tgacgaatccgaagacgacgatgaa 2102
>gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197426 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 167646 gaagaggaggaaggggaggaagagcagga 167618
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 1674419 cgaatacgaagacgacgatga 1674399 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgt 244 ||||||||||||| |||||||||| Sbjct: 21671146 cgccgccgccgccgacggcgacgt 21671123
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 35103167 cgccgccgccgccaacagcgacgtc 35103191 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 22203379 gaagacgacgacgaagaggaggaggaggaggaggaggagga 22203339 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcagaacgccgccgccgcca 234 |||||||||||||||||||| Sbjct: 18375317 gcagaacgccgccgccgcca 18375336
>gb|BC092350.1| Mus musculus suprabasin, mRNA (cDNA clone IMAGE:5029683), complete cds Length = 677 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 156 gaggtgggcaaggcccttgaaggcatcaa 184
>gb|AF323924.1|AF323924 Homo sapiens hepatocellular carcinoma-associated protein HCA11 mRNA, complete cds Length = 2065 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1598 caagctcgacggctacgagct 1618
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186215 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 29300 gaagaggaggaggaggaggaagagcagga 29328
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 25197 caagctcgacggctacgagct 25177
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatgcggaggaagagcagga 313 ||||||||||| ||||||||||| | |||||| ||| |||| Sbjct: 14512 gaagacgacgacgaagaggaggaggaggaggaggaggagga 14552
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 2385 cgccgccgccgccaacagcgacgtc 2361
>ref|XM_214902.3| PREDICTED: Rattus norvegicus similar to suprabasal-specific protein suprabasin (LOC292793), mRNA Length = 1701 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 160 gaggtgggcaaggcccttgaaggcatcaa 188
>emb|BX897672.1| Neurospora crassa DNA linkage group III BAC clone B2H10 Length = 66518 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 agacgacgatgaagaggagga 295 ||||||||||||||||||||| Sbjct: 32794 agacgacgatgaagaggagga 32774
>gb|AF181265.1|AF181265 Homo sapiens EH domain containing 4 (EHD4) mRNA, partial cds Length = 2505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1362 caagctcgacggctacgagct 1382
>dbj|AK024902.1| Homo sapiens cDNA: FLJ21249 fis, clone COL01244, highly similar to AF181265 Homo sapiens EH domain containing 4 (EHD4) mRNA Length = 2104 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 792 caagctcgacggctacgagct 812
>gb|U62317.2|HUB384D8 Homo sapiens chromosome 22q13 BAC clone CIT987SK-384D8 complete sequence Length = 139934 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 35733 gacgacgaggaagaggaggatgccgagga 35705
>gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome Length = 108409 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 63118 gaagaggaggatgaggaggaagaggagga 63090 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 63082 gaagaggaggatgaggaggaagaggagga 63054 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 62938 gaagaggaggatgaggaggaagaggagga 62910
>dbj|AK101761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064B15, full insert sequence Length = 1888 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 1398 cgaatacgaagacgacgatga 1418
>emb|AJ327766.1|HSA327766 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AK15R Length = 752 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagaggaggatg 297 ||||||||||||||||| ||||||| Sbjct: 347 gaagacgacgatgaagacgaggatg 323
>dbj|AK067347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E16, full insert sequence Length = 3325 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgtc 245 |||||||||||||||| |||||||| Sbjct: 379 cgccgccgccgccaacagcgacgtc 355
>gb|BC006287.2| Homo sapiens EH-domain containing 4, mRNA (cDNA clone MGC:10536 IMAGE:3958645), complete cds Length = 2941 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 caagctcgacggctacgagct 376 ||||||||||||||||||||| Sbjct: 1589 caagctcgacggctacgagct 1609
>gb|AF136382.1|AF136382 Homo sapiens JNK MAP kinase scaffold protein JIP2 mRNA, complete cds Length = 3355 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1540 gacgacgaggaagaggaggatgccgagga 1568
>gb|BC009940.2| Homo sapiens mitogen-activated protein kinase 8 interacting protein 2, transcript variant 3, mRNA (cDNA clone MGC:12630 IMAGE:4100637), complete cds Length = 2181 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 307 gacgacgaggaagaggaggatgccgagga 335
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 66645 gacgacgatgacgaggaggatgcgg 66669
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 134055 gacgacgatgacgaggaggatgcgg 134031
>emb|CR942476.2| Xenopus tropicalis finished cDNA, clone TEgg055i18 Length = 3931 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggagga 304 ||||||||||||||||||||| Sbjct: 2712 tgaagaggaggatgcggagga 2732
>emb|CR760010.2| Xenopus tropicalis finished cDNA, clone TNeu144o10 Length = 937 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggagga 304 ||||||||||||||||||||| Sbjct: 296 tgaagaggaggatgcggagga 316
>gb|AF046002.1|AF046002 Carassius auratus secretogranin II precursor, mRNA, complete cds Length = 2253 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gaagacgacgatgaagaggaggatg 297 |||||||| |||||||||||||||| Sbjct: 1214 gaagacgaagatgaagaggaggatg 1238
>emb|CR753900.9| Zebrafish DNA sequence from clone CH211-167B13 in linkage group 10, complete sequence Length = 113731 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||| ||||||||||| Sbjct: 41823 acgaagacgacgacgaagaggagga 41799
>dbj|AB093218.1| Mus musculus mRNA for mKIAA0236 protein Length = 6445 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgaagaggaggatgcggaggaagag 308 ||||||||||||||| ||||||||| Sbjct: 1434 tgaagaggaggatgcagaggaagag 1458
>dbj|D38524.1|HUM5N Homo sapiens mRNA for 5'-nucleotidase, complete cds Length = 3256 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| || |||||||||||||| | ||||||||| Sbjct: 1729 acgaagatgatgatgaagaggaggaggaggaggaaga 1765
>gb|BC091359.1| Rattus norvegicus DEAH (Asp-Glu-Ala-His) box polypeptide 30, mRNA (cDNA clone MGC:109411 IMAGE:7318733), complete cds Length = 3853 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 734 gaagaggaggatgaggaggaagagc 758
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 cgaatacgaagacgacgatga 286 ||||||||||||||||||||| Sbjct: 1674370 cgaatacgaagacgacgatga 1674350 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgt 244 ||||||||||||| |||||||||| Sbjct: 21682809 cgccgccgccgccgacggcgacgt 21682786
>ref|NM_001013249.1| Rattus norvegicus DEAH (Asp-Glu-Ala-His) box polypeptide 30 (Dhx30), mRNA Length = 3853 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagc 309 ||||||||||||| ||||||||||| Sbjct: 734 gaagaggaggatgaggaggaagagc 758
>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete sequence Length = 206957 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| |||||||||||| |||| Sbjct: 184455 gaagaggaggaagcggaggaagaggagga 184427
>gb|BC037271.1| Homo sapiens cDNA clone IMAGE:4823722, containing frame-shift errors Length = 3291 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 1454 gacgacgaggaagaggaggatgccgagga 1482
>gb|L04930.1|DRORBP9A Drosophila melanogaster RNA-binding protein gene fragment Length = 11347 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 gacgacgatgaagaggaggatgcgg 300 ||||||||||| ||||||||||||| Sbjct: 9198 gacgacgatgacgaggaggatgcgg 9174
>gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosome 13, complete sequence Length = 203948 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 133978 gaagaggaggatgaggaggaagaggagga 134006
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||||| |||||||||| |||| Sbjct: 1980934 gaagaggaggatgaggaggaagaggagga 1980962
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggaggatgcggaggaaga 307 ||||||| ||||| ||||||||||| | ||||||||| Sbjct: 719501 acgaagatgacgacgaagaggaggaagtggaggaaga 719537
>gb|AC092856.26| Mus musculus strain C57BL/6J chromosome 10 clone rp23-7p15, complete sequence Length = 221799 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagagcagga 313 ||||||||||| | ||||||||||||||| Sbjct: 176536 gaagaggaggaggaggaggaagagcagga 176564
>ref|NM_172205.1| Mus musculus suprabasin (Sbsn), mRNA Length = 2277 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 166 gaggtgggcaaggcccttgaaggcatcaa 194
>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence Length = 241077 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 75052 gaggtgggcaaggcccttgaaggcatcaa 75080
>ref|NM_199555.2| Danio rerio high-mobility group box 1 (hmgb1), mRNA Length = 1422 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||| ||||||||||| Sbjct: 757 acgaagacgacgacgaagaggagga 781
>gb|BC045917.1| Danio rerio high-mobility group box 1, mRNA (cDNA clone MGC:56110 IMAGE:5411187), complete cds Length = 1282 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 acgaagacgacgatgaagaggagga 295 ||||||||||||| ||||||||||| Sbjct: 621 acgaagacgacgacgaagaggagga 645
>gb|BC107924.1| Rattus norvegicus cDNA clone MGC:125085 IMAGE:7444071, complete cds Length = 665 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 gaggtgagcaaggcccttgaagacatcaa 424 |||||| ||||||||||||||| |||||| Sbjct: 148 gaggtgggcaaggcccttgaaggcatcaa 176
>emb|AL021708.1|HSU56K21 Homo sapiens partial cDNA homologous to M.musculus JIP-1 gene Length = 2233 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggaggatgcggagga 304 |||||||| |||||||||||||| ||||| Sbjct: 560 gacgacgaggaagaggaggatgccgagga 588
>gb|AC107851.17| Mus musculus chromosome 9, clone RP23-451B4, complete sequence Length = 190253 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 286 aagaggaggatgcggaggaagagcagga 313 |||||||||||| |||||||||| |||| Sbjct: 439 aagaggaggatggggaggaagaggagga 466
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gaggaggatgcggaggaagagcag 311 |||||||||| ||||||||||||| Sbjct: 153419 gaggaggatggggaggaagagcag 153442
>ref|NM_121994.3| Arabidopsis thaliana unknown protein AT5G19875 mRNA, complete cds Length = 655 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagagga 292 |||||||||||||||||||| Sbjct: 161 gaagacgacgatgaagagga 142
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcg 240 |||||||||||||||||||| Sbjct: 88361 cgccgccgccgccaacggcg 88342
>ref|XM_475345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2160 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcg 240 |||||||||||||||||||| Sbjct: 466 cgccgccgccgccaacggcg 447
>ref|XM_474192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccgccaacggcg 240 |||||||||||||||||||| Sbjct: 609 cgccgccgccgccaacggcg 628
>ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBb0089A17.15), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 cgccgccgccgccaacggcgacgt 244 ||||||||||||| |||||||||| Sbjct: 775 cgccgccgccgccgacggcgacgt 752
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagag 308 ||||||||||| |||||||||||| Sbjct: 134778 gaagaggaggaggcggaggaagag 134801
>ref|XM_525165.1| PREDICTED: Pan troglodytes similar to chromodomain helicase DNA binding protein 5 (LOC469781), mRNA Length = 7422 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggagga 295 |||||||||||||||||||| Sbjct: 2128 gacgacgatgaagaggagga 2147
>ref|NM_031340.1| Rattus norvegicus timeless homolog (Drosophila) (Timeless), mRNA Length = 4237 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 gatgaagaggaggatgcggaggaagagcagga 313 |||||||||||||| | |||||||||| |||| Sbjct: 2098 gatgaagaggaggaggaggaggaagaggagga 2129
>ref|NM_015557.1| Homo sapiens chromodomain helicase DNA binding protein 5 (CHD5), mRNA Length = 9646 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gacgacgatgaagaggagga 295 |||||||||||||||||||| Sbjct: 1295 gacgacgatgaagaggagga 1314
>gb|BT016829.1| Zea mays clone Contig662 mRNA sequence Length = 1064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 acgccgccgccgccaacggc 239 |||||||||||||||||||| Sbjct: 119 acgccgccgccgccaacggc 100
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 atgacgaatacgaagacgacgatgaaga 289 ||||||| || ||||||||||||||||| Sbjct: 1369696 atgacgattatgaagacgacgatgaaga 1369669
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gaagacgacgatgaagagga 292 |||||||||||||||||||| Sbjct: 1080984 gaagacgacgatgaagagga 1080965
>gb|AY023070.1| Oryza sativa microsatellite MRG5395 containing (GAC)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gccgccgccgccaacggcga 241 |||||||||||||||||||| Sbjct: 54 gccgccgccgccaacggcga 35
>ref|XM_323925.1| Neurospora crassa OR74A predicted protein (NCU04570.1) partial mRNA Length = 3291 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggagga 304 |||||||||||||||||||| Sbjct: 1255 gaagaggaggatgcggagga 1274
>ref|XM_364120.1| Magnaporthe grisea 70-15 predicted protein (MG08965.4) partial mRNA Length = 1281 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cgaagacgacgatgaagagg 291 |||||||||||||||||||| Sbjct: 282 cgaagacgacgatgaagagg 301
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gaagaggaggatgcggaggaagag 308 ||||||||||| |||||||||||| Sbjct: 1943 gaagaggaggaggcggaggaagag 1966
>ref|XM_960331.1| Neurospora crassa OR74A hypothetical protein (NCU02651.1) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tccttccctccacagccaca 30 |||||||||||||||||||| Sbjct: 365 tccttccctccacagccaca 384
>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence Length = 183638 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 286 aagaggaggatgcggaggaagagcagga 313 |||||||||||| |||||||||| |||| Sbjct: 136188 aagaggaggatggggaggaagaggagga 136215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,014,020 Number of Sequences: 3902068 Number of extensions: 4014020 Number of successful extensions: 124730 Number of sequences better than 10.0: 350 Number of HSP's better than 10.0 without gapping: 357 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121679 Number of HSP's gapped (non-prelim): 3048 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)