ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190573.1| Oryza sativa (japonica cultivar-group), predic... 244 2e-61
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
3dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
4dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
5ref|NM_187511.1| Oryza sativa (japonica cultivar-group), predic... 103 5e-19
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 5e-19
7gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
8gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
10dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
11dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
12dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
13dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
14ref|NM_100012.2| Arabidopsis thaliana aspartic-type endopeptidas... 48 0.027
15ref|NM_184292.2| Oryza sativa (japonica cultivar-group), mRNA 48 0.027
16ref|XM_476004.1| Oryza sativa (japonica cultivar-group), predic... 48 0.027
17gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.027
18gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.027
19gb|AY128344.1| Arabidopsis thaliana chloroplast nucleoid DNA bin... 48 0.027
20gb|BT006619.1| Arabidopsis thaliana At1g01300 mRNA, complete cds 48 0.027
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
23emb|BX816357.1|CNS0ABRF Arabidopsis thaliana Full-length cDNA Co... 48 0.027
24emb|BX815795.1|CNS0ACDD Arabidopsis thaliana Full-length cDNA Co... 48 0.027
25emb|BX813801.1|CNS0AC0L Arabidopsis thaliana Full-length cDNA Co... 48 0.027
26emb|BX816933.1|CNS0ABKG Arabidopsis thaliana Full-length cDNA Co... 48 0.027
27emb|BX815326.1|CNS0ABGW Arabidopsis thaliana Full-length cDNA Co... 48 0.027
28emb|BX815554.1|CNS0ABEQ Arabidopsis thaliana Full-length cDNA Co... 48 0.027
29emb|BX822920.1|CNS0A73C Arabidopsis thaliana Full-length cDNA Co... 48 0.027
30gb|AY088528.1| Arabidopsis thaliana clone 7567 mRNA, complete se... 48 0.027
31gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F... 48 0.027
32dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
33dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
34dbj|AK105952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
35dbj|AK103957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
36dbj|AK070159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
37dbj|AK068990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
38gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
39dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.11
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
43dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
44ref|XM_367207.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
45gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence 42 1.6
46emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chro... 42 1.6
47gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.6
48gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.6
49dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic protein... 42 1.6
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
51dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.6
52ref|NM_210085.1| Eremothecium gossypii AEL130Cp (AEL130C), mRNA 42 1.6
53gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.6
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
55emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587... 42 1.6
56gb|DQ278492.1| Lysobacter lactamgenus nonribosomal peptide synth... 42 1.6
57ref|NM_192504.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
58ref|XM_463388.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
59ref|XM_472285.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
60gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
61ref|XM_366504.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 6.5
62ref|XM_656810.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.5
63ref|XM_753391.1| Ustilago maydis 521 hypothetical protein (UM023... 40 6.5
64emb|Z84468.1|HS299D3 Human DNA sequence from clone CTA-299D3 on ... 40 6.5
65gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.5
66emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
67ref|NM_001037606.1| Bos taurus UNC-112 related protein 2 (URP2),... 40 6.5
68gb|BC109488.1| Bos taurus cDNA clone MGC:128660 IMAGE:7986942, c... 40 6.5
69gb|AE011649.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.5
70gb|AC007916.10| Homo sapiens 12 BAC RP11-103D14 (Roswell Park Ca... 40 6.5
71gb|S74494.1| FMR1 {CGG repeats} [human, Fragile X syndrome patie... 40 6.5
72dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
73dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
74dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 6.5
75dbj|AB167477.1| Chlamydomonas reinhardtii NSG13 mRNA for NSG13 p... 40 6.5
76dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
77dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
78dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
79dbj|AK120968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
80ref|XM_310703.2| Anopheles gambiae str. PEST ENSANGP00000022002 ... 40 6.5
81dbj|AK101038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
82dbj|AK072645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
83dbj|AK072283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
84gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.5
85gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.5
86gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
87emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
88dbj|AB042507.1| Gallus gallus mRNA for NK class homeoprotein Nkx... 40 6.5 
>ref|NM_190573.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score =  244 bits (123), Expect = 2e-61
 Identities = 165/179 (92%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctgcttttcgcgctgcgggcgcgccagatgcccgccagggcgctgccgcggcagcccagc 204
           ||||| |||| |||||||||||| ||| |||| ||  ||||||||||||||| | | |||
Sbjct: 109 ctgctgttcgagctgcgggcgcggcaggtgccggcgggggcgctgccgcggccggcgagc 168

                                                                       
Query: 205 aagctacggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 264
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aagctgcggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 228

                                                                      
Query: 265 cagaacgtcaccatggtgctcgacaccggcagcgagctgtcctggctgctctgcgcgcc 323
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 229 cagaatgtcaccatggtgctcgacaccggcagcgagctgtcgtggctgctctgtgcgcc 287



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                       
Query: 346 agcgcgatgtcctttcgtccgagggcatcgtccaccttcgccgccgttccctgcgcctcc 405
           |||||| |||| || || || |||||||||   ||||||||| |||| ||||||| ||||
Sbjct: 316 agcgcgctgtctttccggccaagggcatcgcttaccttcgcctccgtgccctgcgactcc 375

                                                             
Query: 406 gcgcagtgccgctcccgtgacctgccatcaccgccggcctgcgacggggc 455
           ||||||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 376 gcgcagtgccgatcccgcgacctgccgtcgccgccggcctgcgacggggc 425
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  244 bits (123), Expect = 2e-61
 Identities = 165/179 (92%)
 Strand = Plus / Minus

                                                                            
Query: 145      ctgcttttcgcgctgcgggcgcgccagatgcccgccagggcgctgccgcggcagcccagc 204
                ||||| |||| |||||||||||| ||| |||| ||  ||||||||||||||| | | |||
Sbjct: 36262703 ctgctgttcgagctgcgggcgcggcaggtgccggcgggggcgctgccgcggccggcgagc 36262644

                                                                            
Query: 205      aagctacggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 264
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36262643 aagctgcggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 36262584

                                                                           
Query: 265      cagaacgtcaccatggtgctcgacaccggcagcgagctgtcctggctgctctgcgcgcc 323
                ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 36262583 cagaatgtcaccatggtgctcgacaccggcagcgagctgtcgtggctgctctgtgcgcc 36262525



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                            
Query: 346      agcgcgatgtcctttcgtccgagggcatcgtccaccttcgccgccgttccctgcgcctcc 405
                |||||| |||| || || || |||||||||   ||||||||| |||| ||||||| ||||
Sbjct: 36262496 agcgcgctgtctttccggccaagggcatcgcttaccttcgcctccgtgccctgcgactcc 36262437

                                                                  
Query: 406      gcgcagtgccgctcccgtgacctgccatcaccgccggcctgcgacggggc 455
                ||||||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 36262436 gcgcagtgccgatcccgcgacctgccgtcgccgccggcctgcgacggggc 36262387



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 276     catggtgctcgacaccggcagcga 299
               ||||||||||||||||||||||||
Sbjct: 2120061 catggtgctcgacaccggcagcga 2120084



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 245      tcgccgtcggcacgccgccgcaga 268
                ||||| ||||||||||||||||||
Sbjct: 27084769 tcgccatcggcacgccgccgcaga 27084746



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 276      catggtgctcgacaccggcagcga 299
                ||||||||| ||||||||||||||
Sbjct: 23511630 catggtgctggacaccggcagcga 23511653
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score =  244 bits (123), Expect = 2e-61
 Identities = 165/179 (92%)
 Strand = Plus / Minus

                                                                         
Query: 145   ctgcttttcgcgctgcgggcgcgccagatgcccgccagggcgctgccgcggcagcccagc 204
             ||||| |||| |||||||||||| ||| |||| ||  ||||||||||||||| | | |||
Sbjct: 12580 ctgctgttcgagctgcgggcgcggcaggtgccggcgggggcgctgccgcggccggcgagc 12521

                                                                         
Query: 205   aagctacggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 264
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12520 aagctgcggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 12461

                                                                        
Query: 265   cagaacgtcaccatggtgctcgacaccggcagcgagctgtcctggctgctctgcgcgcc 323
             ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 12460 cagaatgtcaccatggtgctcgacaccggcagcgagctgtcgtggctgctctgtgcgcc 12402



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                         
Query: 346   agcgcgatgtcctttcgtccgagggcatcgtccaccttcgccgccgttccctgcgcctcc 405
             |||||| |||| || || || |||||||||   ||||||||| |||| ||||||| ||||
Sbjct: 12373 agcgcgctgtctttccggccaagggcatcgcttaccttcgcctccgtgccctgcgactcc 12314

                                                               
Query: 406   gcgcagtgccgctcccgtgacctgccatcaccgccggcctgcgacggggc 455
             ||||||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 12313 gcgcagtgccgatcccgcgacctgccgtcgccgccggcctgcgacggggc 12264
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>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406G08
          Length = 144233

 Score =  244 bits (123), Expect = 2e-61
 Identities = 165/179 (92%)
 Strand = Plus / Minus

                                                                          
Query: 145    ctgcttttcgcgctgcgggcgcgccagatgcccgccagggcgctgccgcggcagcccagc 204
              ||||| |||| |||||||||||| ||| |||| ||  ||||||||||||||| | | |||
Sbjct: 139716 ctgctgttcgagctgcgggcgcggcaggtgccggcgggggcgctgccgcggccggcgagc 139657

                                                                          
Query: 205    aagctacggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 264
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139656 aagctgcggttccaccacaacgtcagcctcaccgtctcgctcgccgtcggcacgccgccg 139597

                                                                         
Query: 265    cagaacgtcaccatggtgctcgacaccggcagcgagctgtcctggctgctctgcgcgcc 323
              ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 139596 cagaatgtcaccatggtgctcgacaccggcagcgagctgtcgtggctgctctgtgcgcc 139538



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                          
Query: 346    agcgcgatgtcctttcgtccgagggcatcgtccaccttcgccgccgttccctgcgcctcc 405
              |||||| |||| || || || |||||||||   ||||||||| |||| ||||||| ||||
Sbjct: 139509 agcgcgctgtctttccggccaagggcatcgcttaccttcgcctccgtgccctgcgactcc 139450

                                                                
Query: 406    gcgcagtgccgctcccgtgacctgccatcaccgccggcctgcgacggggc 455
              ||||||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 139449 gcgcagtgccgatcccgcgacctgccgtcgccgccggcctgcgacggggc 139400
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>ref|NM_187511.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1344

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
           |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 178 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 237

                       
Query: 307 tggctgctctgc 318
           ||||||||||||
Sbjct: 238 tggctgctctgc 249
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                           
Query: 247     gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
               |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 9069262 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 9069321

                           
Query: 307     tggctgctctgc 318
               ||||||||||||
Sbjct: 9069322 tggctgctctgc 9069333
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                         
Query: 247   gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
             |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 76298 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 76357

                         
Query: 307   tggctgctctgc 318
             ||||||||||||
Sbjct: 76358 tggctgctctgc 76369
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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0016G06, complete sequence
          Length = 119910

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                         
Query: 247   gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
             |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 12442 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 12501

                         
Query: 307   tggctgctctgc 318
             ||||||||||||
Sbjct: 12502 tggctgctctgc 12513
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                           
Query: 247     gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
               |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 9067095 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 9067154

                           
Query: 307     tggctgctctgc 318
               ||||||||||||
Sbjct: 9067155 tggctgctctgc 9067166
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>dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H04, full
           insert sequence
          Length = 1735

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
           |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 294 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 353

                       
Query: 307 tggctgctctgc 318
           ||||||||||||
Sbjct: 354 tggctgctctgc 365
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>dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123A19, full
           insert sequence
          Length = 1990

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
           |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 555 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 614

                       
Query: 307 tggctgctctgc 318
           ||||||||||||
Sbjct: 615 tggctgctctgc 626
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>dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C01, full
            insert sequence
          Length = 2012

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                        
Query: 247  gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
            |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 1286 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 1227

                        
Query: 307  tggctgctctgc 318
            ||||||||||||
Sbjct: 1226 tggctgctctgc 1215
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>dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P16, full
           insert sequence
          Length = 1965

 Score =  103 bits (52), Expect = 5e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 247 gccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcgagctgtcc 306
           |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || 
Sbjct: 588 gccgtcggcacgccaccgcagaacgtgacgatggtgctcgacaccggcagcgagctctcg 647

                       
Query: 307 tggctgctctgc 318
           ||||||||||||
Sbjct: 648 tggctgctctgc 659
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>ref|NM_100012.2| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A
           AT1G01300 mRNA, complete cds
          Length = 1822

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 590 catggtgctcgacaccggcagcga 613
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>ref|NM_184292.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1833

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 574 catggtgctcgacaccggcagcga 597
to top
>ref|XM_476004.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 408 catggtgctcgacaccggcagcga 431
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>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0022J22, complete sequence
          Length = 142854

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 276   catggtgctcgacaccggcagcga 299
             ||||||||||||||||||||||||
Sbjct: 44117 catggtgctcgacaccggcagcga 44094
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>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
             complete sequence
          Length = 100800

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 276   catggtgctcgacaccggcagcga 299
             ||||||||||||||||||||||||
Sbjct: 86882 catggtgctcgacaccggcagcga 86859
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>gb|AY128344.1| Arabidopsis thaliana chloroplast nucleoid DNA binding protein,
           putative (At1g01300) mRNA, complete cds
          Length = 1690

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 485 catggtgctcgacaccggcagcga 508
to top
>gb|BT006619.1| Arabidopsis thaliana At1g01300 mRNA, complete cds
          Length = 1458

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 468 catggtgctcgacaccggcagcga 491
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 244      ctcgccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcga 299
                ||||||||||||||||||||||||  | ||||   | |||| ||||||||||||||
Sbjct: 16923166 ctcgccgtcggcacgccgccgcagcccatcacggcgctgctggacaccggcagcga 16923221
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 276      catggtgctcgacaccggcagcga 299
                ||||||||||||||||||||||||
Sbjct: 29160658 catggtgctcgacaccggcagcga 29160635
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>emb|BX816357.1|CNS0ABRF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH43ZD11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1562

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 489 catggtgctcgacaccggcagcga 512
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>emb|BX815795.1|CNS0ACDD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZA03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1691

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 480 catggtgctcgacaccggcagcga 503
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>emb|BX813801.1|CNS0AC0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1541

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 487 catggtgctcgacaccggcagcga 510
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>emb|BX816933.1|CNS0ABKG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH77ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1655

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 486 catggtgctcgacaccggcagcga 509
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>emb|BX815326.1|CNS0ABGW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS52ZB08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1649

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 487 catggtgctcgacaccggcagcga 510
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>emb|BX815554.1|CNS0ABEQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS71ZB03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1472

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 487 catggtgctcgacaccggcagcga 510
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>emb|BX822920.1|CNS0A73C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB73ZC07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1583

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 276  catggtgctcgacaccggcagcga 299
            ||||||||||||||||||||||||
Sbjct: 1044 catggtgctcgacaccggcagcga 1021
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>gb|AY088528.1| Arabidopsis thaliana clone 7567 mRNA, complete sequence
          Length = 1598

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 503 catggtgctcgacaccggcagcga 526
to top
>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete
             sequence
          Length = 104001

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 276   catggtgctcgacaccggcagcga 299
             ||||||||||||||||||||||||
Sbjct: 58440 catggtgctcgacaccggcagcga 58463
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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 276   catggtgctcgacaccggcagcga 299
             ||||||||||||||||||||||||
Sbjct: 41173 catggtgctcgacaccggcagcga 41196
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>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 244   ctcgccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcga 299
             ||||||||||||||||||||||||  | ||||   | |||| ||||||||||||||
Sbjct: 52979 ctcgccgtcggcacgccgccgcagcccatcacggcgctgctggacaccggcagcga 53034
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>dbj|AK105952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D02, full
           insert sequence
          Length = 1449

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 244 ctcgccgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||  | ||||   | |||| ||||||||||||||
Sbjct: 336 ctcgccgtcggcacgccgccgcagcccatcacggcgctgctggacaccggcagcga 391
to top
>dbj|AK103957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-B02, full
           insert sequence
          Length = 1639

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 441 catggtgctcgacaccggcagcga 464
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>dbj|AK070159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046M06, full
           insert sequence
          Length = 1714

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 518 catggtgctcgacaccggcagcga 541
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>dbj|AK068990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170M01, full
           insert sequence
          Length = 1833

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||||||||||||||||||
Sbjct: 574 catggtgctcgacaccggcagcga 597
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>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
             complete sequence
          Length = 153276

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 202   agcaagctacggttccaccacaacgtcagcctcac 236
             |||||||| || |||||||||||||| ||||||||
Sbjct: 48827 agcaagctgcgattccaccacaacgttagcctcac 48861
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 202      agcaagctacggttccaccacaacgtcagcctcac 236
                |||||||| || |||||||||||||| ||||||||
Sbjct: 14990208 agcaagctgcgattccaccacaacgttagcctcac 14990242
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 109     tggccgtccgaggcggcgacggc 131
               |||||||||||||||||||||||
Sbjct: 3895439 tggccgtccgaggcggcgacggc 3895461
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 202      agcaagctacggttccaccacaacgtcagcctcac 236
                |||||||| || |||||||||||||| ||||||||
Sbjct: 14998449 agcaagctgcgattccaccacaacgttagcctcac 14998483
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 243      gctcgccgtcggcacgccgccg 264
                ||||||||||||||||||||||
Sbjct: 20871648 gctcgccgtcggcacgccgccg 20871669
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>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0039D04
          Length = 184408

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 243   gctcgccgtcggcacgccgccg 264
             ||||||||||||||||||||||
Sbjct: 82438 gctcgccgtcggcacgccgccg 82459
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>ref|XM_367207.1| Magnaporthe grisea 70-15 hypothetical protein (MG07132.4) partial
            mRNA
          Length = 1524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 318  cgcgccggccggcgccaggaacaag 342
            |||||||||||| ||||||||||||
Sbjct: 1086 cgcgccggccggtgccaggaacaag 1110
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>gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence
          Length = 37218

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 368  gggcatcgtccaccttcgccgccgt 392
            ||||||||| |||||||||||||||
Sbjct: 3326 gggcatcgtgcaccttcgccgccgt 3350
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>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains
              a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes,
              the 5' end of a variant of the PTPRD gene for protein
              tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD).
              and a CpG island, complete sequence
          Length = 176273

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    gcgctgcgggcgcgccagatg 174
              |||||||||||||||||||||
Sbjct: 136304 gcgctgcgggcgcgccagatg 136324
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 279     ggtgctcgacaccggcagcgagctg 303
               ||||||||||||||||||| |||||
Sbjct: 2942109 ggtgctcgacaccggcagcaagctg 2942133
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     tgcctcgtcctgcttgccgcg 105
              |||||||||||||||||||||
Sbjct: 380019 tgcctcgtcctgcttgccgcg 380039
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>dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic proteinase, complete cds
          Length = 1527

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 249 cgtcggcacgccgccgcagaacgtcaccatggtgctcgacaccggcagc 297
           |||||||||||||||||||||  ||||| |  |  ||||||||||||||
Sbjct: 264 cgtcggcacgccgccgcagaagttcaccgtcatcttcgacaccggcagc 312
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 284     tcgacaccggcagcgagctgt 304
               |||||||||||||||||||||
Sbjct: 3192060 tcgacaccggcagcgagctgt 3192080
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 238     gtctcgctcgccgtcggcacg 258
               |||||||||||||||||||||
Sbjct: 1846871 gtctcgctcgccgtcggcacg 1846851
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>ref|NM_210085.1| Eremothecium gossypii AEL130Cp (AEL130C), mRNA
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  tgcctcgtcctgcttgccgcg 105
           |||||||||||||||||||||
Sbjct: 479 tgcctcgtcctgcttgccgcg 459
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 452     gggcgtcagcaggtgcagcgt 472
               |||||||||||||||||||||
Sbjct: 2015142 gggcgtcagcaggtgcagcgt 2015162
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 284     tcgacaccggcagcgagctgt 304
               |||||||||||||||||||||
Sbjct: 3192005 tcgacaccggcagcgagctgt 3192025
to top
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 90756

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   tcgacaccggcagcgagctgt 304
             |||||||||||||||||||||
Sbjct: 25604 tcgacaccggcagcgagctgt 25584
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>gb|DQ278492.1| Lysobacter lactamgenus nonribosomal peptide synthetase - polyketide
            synthase hybrid (cpbI) gene, complete cds
          Length = 15150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 315  ctgcgcgccggccggcgccag 335
            |||||||||||||||||||||
Sbjct: 2298 ctgcgcgccggccggcgccag 2278
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>ref|NM_192504.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 245 tcgccgtcggcacgccgccgcaga 268
           ||||| ||||||||||||||||||
Sbjct: 305 tcgccatcggcacgccgccgcaga 328
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>ref|XM_463388.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||| ||||||||||||||
Sbjct: 483 catggtgctggacaccggcagcga 506
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>ref|XM_472285.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 gccgtccgaggcggcgacgg 130
           ||||||||||||||||||||
Sbjct: 270 gccgtccgaggcggcgacgg 251
to top
>gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0070D17 map G44, complete sequence
          Length = 135627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   cgacaccggcagcgagctgt 304
             ||||||||||||||||||||
Sbjct: 82700 cgacaccggcagcgagctgt 82719
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>ref|XM_366504.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02580.4) partial mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 239 tctcgctcgccgtcggcacgccgc 262
           ||||||||||||||| ||||||||
Sbjct: 197 tctcgctcgccgtcgccacgccgc 220
to top
>ref|XM_656810.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4298.2), mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 tcagcctcaccgtctcgctcgccg 250
           ||||||||||||||||| ||||||
Sbjct: 509 tcagcctcaccgtctcgttcgccg 486
to top
>ref|XM_753391.1| Ustilago maydis 521 hypothetical protein (UM02337.1) partial mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 cccagcaagctacggttcca 218
           ||||||||||||||||||||
Sbjct: 367 cccagcaagctacggttcca 348
to top
>emb|Z84468.1|HS299D3 Human DNA sequence from clone CTA-299D3 on chromosome 22q13.3, complete
             sequence
          Length = 90736

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   ccgaggcggcgacggcaggc 135
             ||||||||||||||||||||
Sbjct: 63683 ccgaggcggcgacggcaggc 63702
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     tcgccgtcggcacgccgccg 264
               ||||||||||||||||||||
Sbjct: 3797646 tcgccgtcggcacgccgccg 3797627
to top
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19,
              complete sequence
          Length = 188317

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gccgtccgaggcggcgacgg 130
              ||||||||||||||||||||
Sbjct: 187514 gccgtccgaggcggcgacgg 187495
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>ref|NM_001037606.1| Bos taurus UNC-112 related protein 2 (URP2), mRNA
          Length = 2538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 386 ccgccgttccctgcgcctccgcgc 409
           ||||||| ||||||||||||||||
Sbjct: 462 ccgccgtgccctgcgcctccgcgc 485
to top
>gb|BC109488.1| Bos taurus cDNA clone MGC:128660 IMAGE:7986942, complete cds
          Length = 2538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 386 ccgccgttccctgcgcctccgcgc 409
           ||||||| ||||||||||||||||
Sbjct: 462 ccgccgtgccctgcgcctccgcgc 485
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>gb|AE011649.1| Xanthomonas axonopodis pv. citri str. 306,  section 27 of 469 of the
            complete genome
          Length = 11071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   tgcttgccgcgccatggccg 114
            ||||||||||||||||||||
Sbjct: 6115 tgcttgccgcgccatggccg 6096
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>gb|AC007916.10| Homo sapiens 12 BAC RP11-103D14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 121500

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ccccatgcctcccccgctgc 73
             ||||||||||||||||||||
Sbjct: 50179 ccccatgcctcccccgctgc 50198
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>gb|S74494.1| FMR1 {CGG repeats} [human, Fragile X syndrome patient, Genomic, 429
           nt]
          Length = 429

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 cgctcgccgtcggcacgccgccgc 265
           |||||||||||||| |||||||||
Sbjct: 145 cgctcgccgtcggcccgccgccgc 122
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      gccgtccgaggcggcgacgg 130
                ||||||||||||||||||||
Sbjct: 19095589 gccgtccgaggcggcgacgg 19095570
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     cgacaccggcagcgagctgt 304
               ||||||||||||||||||||
Sbjct: 9815456 cgacaccggcagcgagctgt 9815475
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     gcgcgccggccggcgccagg 336
               ||||||||||||||||||||
Sbjct: 1577492 gcgcgccggccggcgccagg 1577511
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>dbj|AB167477.1| Chlamydomonas reinhardtii NSG13 mRNA for NSG13 protein, complete cds
          Length = 3528

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  gaggcggcgacggcaggcgc 137
            ||||||||||||||||||||
Sbjct: 1779 gaggcggcgacggcaggcgc 1798
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>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0671D01
          Length = 163006

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 245    tcgccgtcggcacgccgccgcaga 268
              ||||| ||||||||||||||||||
Sbjct: 143600 tcgccatcggcacgccgccgcaga 143577
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ccgtcggcacgccgccgcag 267
              ||||||||||||||||||||
Sbjct: 802565 ccgtcggcacgccgccgcag 802546
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   catggtgctcgacaccggcagcga 299
             ||||||||| ||||||||||||||
Sbjct: 74935 catggtgctggacaccggcagcga 74958
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>dbj|AK120968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040I01, full
           insert sequence
          Length = 1769

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||| ||||||||||||||
Sbjct: 512 catggtgctggacaccggcagcga 535
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>ref|XM_310703.2| Anopheles gambiae str. PEST ENSANGP00000022002 (ENSANGG00000019513),
            partial mRNA
          Length = 2421

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  ggggcgtcagcaggtgcagc 470
            ||||||||||||||||||||
Sbjct: 1375 ggggcgtcagcaggtgcagc 1356
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>dbj|AK101038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000J20, full
           insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 catggtgctcgacaccggcagcga 299
           ||||||||| ||||||||||||||
Sbjct: 517 catggtgctggacaccggcagcga 540
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>dbj|AK072645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B07, full
           insert sequence
          Length = 1576

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 245 tcgccgtcggcacgccgccgcaga 268
           ||||| ||||||||||||||||||
Sbjct: 75  tcgccatcggcacgccgccgcaga 98
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>dbj|AK072283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016B15, full
           insert sequence
          Length = 1862

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 245 tcgccgtcggcacgccgccgcaga 268
           ||||| ||||||||||||||||||
Sbjct: 421 tcgccatcggcacgccgccgcaga 444
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     tcgccgtcggcacgccgccg 264
               ||||||||||||||||||||
Sbjct: 3319995 tcgccgtcggcacgccgccg 3319976



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 317     gcgcgccggccggcgccagg 336
               ||||||||||||||||||||
Sbjct: 2114388 gcgcgccggccggcgccagg 2114369



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    gcgcgccggccggcgccagg 336
              ||||||||||||||||||||
Sbjct: 146199 gcgcgccggccggcgccagg 146218
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     gcgcgccggccggcgccagg 336
               ||||||||||||||||||||
Sbjct: 4572518 gcgcgccggccggcgccagg 4572537
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     cgacaccggcagcgagctgt 304
               ||||||||||||||||||||
Sbjct: 9887153 cgacaccggcagcgagctgt 9887172
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gccgtccgaggcggcgacgg 130
             ||||||||||||||||||||
Sbjct: 29110 gccgtccgaggcggcgacgg 29091
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>dbj|AB042507.1| Gallus gallus mRNA for NK class homeoprotein Nkx-3.2, complete cds
          Length = 1842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 100 gccgcgccatggccgtccgaggcggcgacggc 131
           |||| |||||||||||||| ||||||| ||||
Sbjct: 94  gccgggccatggccgtccgcggcggcggcggc 125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,917,406
Number of Sequences: 3902068
Number of extensions: 2917406
Number of successful extensions: 74231
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71512
Number of HSP's gapped (non-prelim): 2719
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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