ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61c05 |
|---|---|
| Clone Library Name | barley_pub |
>Y4844_ARATH (O49453) Protein At4g28440| Length = 153 Score = 160 bits (405), Expect = 2e-39 Identities = 82/137 (59%), Positives = 94/137 (68%), Gaps = 3/137 (2%) Frame = +3 Query: 39 LPTMSTAAAQGGEKPALRKPVFVKVDQLKPGTNGHTLIVKVVSAT---PVPGRVRTGXXX 209 + T TAA G RKPVFVKV+QLKPGT GHTL VKV+ A PV + R Sbjct: 1 MATTGTAAVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSL 60 Query: 210 XXXXXXXXIAECLVGDETGSIIFTARNDQVDLLKAGATAILRNAKIDMFKASMRLAVDKW 389 I ECL+GDETG I+FTARNDQVDL+K GAT ILRN++IDMFK +MRL VDKW Sbjct: 61 SRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKW 120 Query: 390 GRVEATEPASFTVNEEN 440 GR+EAT ASFTV E+N Sbjct: 121 GRIEATGAASFTVKEDN 137
>SCA4_RICFE (Q9AJ37) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) Length = 1039 Score = 35.0 bits (79), Expect = 0.11 Identities = 29/113 (25%), Positives = 41/113 (36%) Frame = +3 Query: 15 RSETTPPPLPTMSTAAAQGGEKPALRKPVFVKVDQLKPGTNGHTLIVKVVSATPVPGRVR 194 RS+ TP P+ T + E P Q+ P T + + S P P +V Sbjct: 391 RSQETPQPIITPNQELKSSIETPT--------TTQVPPITPANQPLQPETSQMPQPQQVN 442 Query: 195 TGXXXXXXXXXXXIAECLVGDETGSIIFTARNDQVDLLKAGATAILRNAKIDM 353 + + L G N Q+DL+ ATAIL N K D+ Sbjct: 443 PNLLNAATALSTSMQDLLNYVNAGLTKEKDGNKQIDLINEAATAILNNEKSDI 495
>SCA4_RICRH (Q9AJ81) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 1013 Score = 32.7 bits (73), Expect = 0.53 Identities = 28/113 (24%), Positives = 43/113 (38%) Frame = +3 Query: 15 RSETTPPPLPTMSTAAAQGGEKPALRKPVFVKVDQLKPGTNGHTLIVKVVSATPVPGRVR 194 + ++ PL T A+ E P ++ Q+ P T + + S P +V Sbjct: 347 QGQSKEQPLITPQQTASSSVESPQYKQ-------QVPPITPTNQPLQPETSQMPQSQQVN 399 Query: 195 TGXXXXXXXXXXXIAECLVGDETGSIIFTARNDQVDLLKAGATAILRNAKIDM 353 + + L G N Q+DL+K ATAIL NAK D+ Sbjct: 400 PNLLNAATALSGSMQDLLNYVNAGLTKEIDSNKQIDLIKEAATAILHNAKSDI 452
>SCA4_RICPA (Q9AJ75) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 1010 Score = 30.8 bits (68), Expect = 2.0 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = +3 Query: 288 NDQVDLLKAGATAILRNAKIDMFKASMRLAVDKWGRVEATEPASFTVNEEN 440 N Q+DL+K ATAIL N K D+ V+K + A A TVN +N Sbjct: 430 NKQIDLIKEAATAILNNEKSDI--------VEKQANIIAL--AENTVNNKN 470
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 30 PPPLPTMSTAAAQGGEKPALRKPVFVKVDQLKPGTNGHTLIVKVVSATPVPG 185 PP + +TA G KP V + Q+ T G ++ V + TP PG Sbjct: 1443 PPGTFSTTTATTMGSVVAPDAKPPTVLLQQVASNTAGVAIVTSVSTTTPFPG 1494
>SCA4_RICCN (Q52658) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (RCA) Length = 1022 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 Query: 288 NDQVDLLKAGATAILRNAKIDM 353 N Q+DL+K ATAIL N K D+ Sbjct: 438 NKQIDLIKEAATAILNNEKSDI 459
>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) (Adipocyte determination- and differentiation-dependent factor 1) (ADD1) (Fragment) Length = 1024 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = +3 Query: 30 PPPL---PTMSTAAAQGGEKPALRKPVFVKVDQL 122 PPP P MST A+Q + P + +P F+K D L Sbjct: 186 PPPASAAPRMSTVASQIQQVPVVLQPHFIKADSL 219
>SCA4_RICSI (Q9AJ77) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 991 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 Query: 288 NDQVDLLKAGATAILRNAKIDM 353 N Q+DL+K ATAIL N K D+ Sbjct: 431 NKQIDLIKEAATAILNNEKSDI 452
>SCA4_RICMN (Q9AJ82) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 1011 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 Query: 288 NDQVDLLKAGATAILRNAKIDM 353 N Q+DL+K ATAIL N K D+ Sbjct: 431 NKQIDLIKEAATAILNNEKSDI 452
>DHB2_HUMAN (P37059) Estradiol 17-beta-dehydrogenase 2 (EC 1.1.1.62)| (17-beta-HSD 2) (Microsomal 17-beta-hydroxysteroid dehydrogenase) (20 alpha-hydroxysteroid dehydrogenase) (20-alpha-HSD) (E2DH) Length = 387 Score = 29.6 bits (65), Expect = 4.4 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +3 Query: 339 AKIDMFKASMRLAVDKWG-RVEATEPASFTVNEENT 443 A + MF + MRL + KWG +V + +P F N T Sbjct: 237 AAVTMFSSVMRLELSKWGIKVASIQPGGFLTNIAGT 272
>SCA4_RICAF (Q9AJ83) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 1028 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 Query: 288 NDQVDLLKAGATAILRNAKIDM 353 N Q+DL+K ATAIL N K D+ Sbjct: 442 NKQIDLIKEAATAILNNEKSDI 463
>AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein| Length = 444 Score = 29.3 bits (64), Expect = 5.8 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +2 Query: 107 QGGPAQAGHQRPHPHRQGR---ERHPRPWPRAH 196 QG PA + PH H Q HP+P P++H Sbjct: 91 QGLPAHNTYSTPHAHTQAHTHAHSHPQPHPQSH 123
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 29.3 bits (64), Expect = 5.8 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +2 Query: 107 QGGPAQAGHQRPHPHRQGR---ERHPRPWPRAH 196 QG PA + PH H Q HP+P P++H Sbjct: 91 QGLPAHNTYSTPHAHTQAHTHAHSHPQPHPQSH 123
>SYI_STRCO (Q9S2X5) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1047 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 371 PHRSF-EHVNFSIAQDGCSTSLQQVNLVVAGGKDDGA 264 PHR F + V F+ AQ+GCS +V V+ D G+ Sbjct: 496 PHRPFIDDVTFTCAQEGCSLEAVRVPEVIDAWYDSGS 532
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.3 bits (64), Expect = 5.8 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +2 Query: 131 HQRPHPHRQGRERHPRPWP 187 HQ PHPH+ + +HP P Sbjct: 1730 HQHPHPHQHPQHQHPHQMP 1748
>YFEO_SALTY (Q93IM6) Putative ion-transport protein yfeO| Length = 411 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -2 Query: 148 RVWPLVPGLSWSTLTNTGFLSAGFSPPCAAA 56 R++P + L W+ L + G + A F P AAA Sbjct: 137 RLFPRITALDWTILASAGTIGALFGTPVAAA 167
>YFEO_SALTI (Q8Z4X8) Putative ion-transport protein yfeO| Length = 411 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -2 Query: 148 RVWPLVPGLSWSTLTNTGFLSAGFSPPCAAA 56 R++P + L W+ L + G + A F P AAA Sbjct: 137 RLFPRITALDWTILASAGTIGALFGTPVAAA 167
>RFA1_SCHPO (Q92372) Replication factor-A protein 1 (Single-stranded| DNA-binding protein p68 subunit) Length = 609 Score = 28.9 bits (63), Expect = 7.6 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%) Frame = +3 Query: 6 GTTRSETTPPPLPTMSTAAAQGGEKPALRKPVFVKVDQLKPGTNGHTLIVKVVSATPVPG 185 G + T P P P M AA P + ++ L P N T+ +V + + V Sbjct: 152 GNNAAATAPAPPPMMKKPAA-----PNSLSTIIYPIEGLSPYQNKWTIRARVTNKSEVK- 205 Query: 186 RVRTGXXXXXXXXXXXIAECLVGDETGSIIFTARNDQV----DLLKAGATAILRNAKIDM 353 + + DE+G I T NDQV D+L+ G+ + ++++ Sbjct: 206 ------HWHNQRGEGKLFSVNLLDESGEIRATGFNDQVDAFYDILQEGSVYYISRCRVNI 259 Query: 354 FK 359 K Sbjct: 260 AK 261
>POLS_EEEV3 (P27284) Structural polyprotein (p130) [Contains: Capsid protein| (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike g Length = 1240 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 116 PAQAGHQRPHPHRQGRERHPRPWPRAHWC 202 PAQA +RP P + ++R P+P R C Sbjct: 76 PAQAKKKRPPPPAKKQKRKPKPGKRQRMC 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,503,322 Number of Sequences: 219361 Number of extensions: 1064207 Number of successful extensions: 4041 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3718 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4024 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
