| Clone Name | bast61c05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108146.1| Zea mays PCO079748 mRNA sequence Length = 836 Score = 278 bits (140), Expect = 2e-71 Identities = 298/350 (85%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 46 cgatgtcgacagcggcggcgcagggcggc---gagaagccggcgctcaggaagcctgtgt 102 ||||||| ||||||||||||||||||||| || |||||||||||| ||| ||| || | Sbjct: 43 cgatgtccacagcggcggcgcagggcggcagcgacaagccggcgctccggaggcccgtct 102 Query: 103 tcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctcatcgtcaaggtcg 162 || |||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 103 tcaccaaggtcgaccagctcaggccgggcaccaacgggcacaccctcaccgtcaaggtcg 162 Query: 163 tgagcgccacccccgtccctggccgcgtgcgcactggtgcgcccgcctcctcctccgccc 222 | |||||||||||||| ||||| |||| |||| | || || |||||| || || | ||| Sbjct: 163 tcagcgccacccccgtgcctgggcgcgcgcgcccaggcgcacccgccgccgccccatccc 222 Query: 223 gcgccccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccg 282 |||| || |||||||| ||||||||||| || |||||||| ||| ||||| |||| |||| Sbjct: 223 gcgcgccgcgcatcgccgagtgcctcgtcggggacgagaccggcgccatcgtcttcaccg 282 Query: 283 cccgcaacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaatgcta 342 |||||||||||||||||||| || ||||| | ||| |||| |||||||||||||| | Sbjct: 283 cccgcaacgaccaagttgacttgctgaagcccaatgcgacagtgatcttgcgcaatgcca 342 Query: 343 aaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggg 392 |||| ||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 343 aaatagacatgttcaaaggatcaatgaggcttgcagtggacaagtggggg 392
>dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D04, full insert sequence Length = 854 Score = 224 bits (113), Expect = 2e-55 Identities = 233/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 220 cccgcgccccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatcttta 279 ||||| |||| |||||||||||||||||| | ||||||||||| ||| ||||| |||| | Sbjct: 300 cccgccccccgcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttca 359 Query: 280 ccgcccgcaacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaatg 339 ||||||||||||| ||||||||| |||||||| |||||||||||| ||| ||||||||| Sbjct: 360 ccgcccgcaacgagcaagttgacttgttgaagcctggtgctacagtgatcatgcgcaatg 419 Query: 340 ctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtag 399 | ||||| ||||||||||||| || ||||||||||| ||||||||||||||| | ||| Sbjct: 420 ccaaaatcgacatgttcaaaggctcaatgaggcttgcggtggacaagtgggggcgtatag 479 Query: 400 aagctacagaacctgccagctttactgtgaatgaagagaac-acttgtcgc-agtagagt 457 | |||||||||||||||||||||||||| || || || ||| ||||||| | |||||||| Sbjct: 480 aggctacagaacctgccagctttactgttaaggaggacaacaacttgtcactagtagagt 539 Query: 458 acgagctggtt-acgtggctgagtaattg 485 | ||| ||||| ||||| | ||||||||| Sbjct: 540 atgagttggttaacgtgaccgagtaattg 568 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 72 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 131 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 158 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 217 Query: 132 accaacggccacaccctcatcgtcaaggtcgtgagcgccacccccgtccctggccgcg 189 |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 218 accagcggccacaccctcaccgtcaaggtcgtcagcgccacccccgtcccgggccgcg 275
>ref|NM_188693.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 222 bits (112), Expect = 8e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 220 cccgcgccccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatcttta 279 ||||| |||| |||||||||||||||||| | ||||||||||| ||| ||||| |||| | Sbjct: 161 cccgccccccgcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttca 220 Query: 280 ccgcccgcaacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaatg 339 ||||||||||||| ||||||||| |||||||| |||||||||||| ||| ||||||||| Sbjct: 221 ccgcccgcaacgagcaagttgacttgttgaagcctggtgctacagtgatcatgcgcaatg 280 Query: 340 ctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtag 399 | ||||| ||||||||||||| || ||||||||||| ||||||||||||||| | ||| Sbjct: 281 ccaaaatcgacatgttcaaaggctcaatgaggcttgcggtggacaagtgggggcgtatag 340 Query: 400 aagctacagaacctgccagctttactgt 427 | |||||||||||||||||||||||||| Sbjct: 341 aggctacagaacctgccagctttactgt 368 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 72 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 131 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 19 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 78 Query: 132 accaacggccacaccctcatcgtcaaggtcgtgagcgccacccccgtccctggccgcg 189 |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 79 accagcggccacaccctcaccgtcaaggtcgtcagcgccacccccgtcccgggccgcg 136
>gb|AY104721.1| Zea mays PCO105901 mRNA sequence Length = 1144 Score = 212 bits (107), Expect = 8e-52 Identities = 279/335 (83%), Gaps = 1/335 (0%) Strand = Plus / Plus Query: 107 caaggtggaccagctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgag 166 |||||| |||||||||||||||||||| ||||| |||||||||| |||||||||||| || Sbjct: 25 caaggtcgaccagctcaagccgggcactaacgggcacaccctcaccgtcaaggtcgtcag 84 Query: 167 cgccacccccgtccctggccgcgtgcgcactggtgcgcccgcctcctcctccgcccgcgc 226 |||||||||||| || ||||||| |||| | || || |||||| || |||| ||||||| Sbjct: 85 cgccacccccgtgccgggccgcgcgcgcccgggcgcacccgccgccgcctcgtcccgcgc 144 Query: 227 cccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccg 286 || |||||||| ||||||||||| || || ||||| ||| |||| | || |||||||| Sbjct: 145 gccgcgcatcgccgagtgcctcgtcggaga-gagaccggcgtcatcgtattcaccgcccg 203 Query: 287 caacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaat 346 ||||||||||||||| || ||||| | | || || | |||||||||||||| ||||| Sbjct: 204 caacgaccaagttgatttgctgaagcccgaggccacggtgatcttgcgcaatgccaaaat 263 Query: 347 tgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctac 406 ||||||||||||| || ||||||||||| |||||||| |||||| || | || ||||| Sbjct: 264 cgacatgttcaaaggatcaatgaggcttgcagtggacaaatgggggcggattgaggctac 323 Query: 407 agaacctgccagctttactgtgaatgaagagaaca 441 ||| || |||||||| || ||||| ||||| |||| Sbjct: 324 agagccagccagcttcacagtgaaggaagacaaca 358
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 163 bits (82), Expect = 7e-37 Identities = 115/126 (91%) Strand = Plus / Minus Query: 58 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 117 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 14519 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 14460 Query: 118 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgccacccccg 177 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||| Sbjct: 14459 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgctaaccccg 14400 Query: 178 tccctg 183 | |||| Sbjct: 14399 ttcctg 14394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 231 cgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||| Sbjct: 14343 cgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaac 14284 Query: 291 gaccaag 297 || |||| Sbjct: 14283 gagcaag 14277 Score = 48.1 bits (24), Expect = 0.027 Identities = 60/72 (83%) Strand = Plus / Minus Query: 320 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 379 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 10388 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 10329 Query: 380 ggacaagtgggg 391 ||||||||||| Sbjct: 10328 cgacaagtgggg 10317
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 163 bits (82), Expect = 7e-37 Identities = 115/126 (91%) Strand = Plus / Minus Query: 58 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 117 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 90500 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 90441 Query: 118 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgccacccccg 177 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||| Sbjct: 90440 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgctaaccccg 90381 Query: 178 tccctg 183 | |||| Sbjct: 90380 ttcctg 90375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 231 cgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||| Sbjct: 90324 cgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaac 90265 Query: 291 gaccaag 297 || |||| Sbjct: 90264 gagcaag 90258 Score = 48.1 bits (24), Expect = 0.027 Identities = 60/72 (83%) Strand = Plus / Minus Query: 320 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 379 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 86369 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 86310 Query: 380 ggacaagtgggg 391 ||||||||||| Sbjct: 86309 cgacaagtgggg 86298
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 7e-37 Identities = 115/126 (91%) Strand = Plus / Minus Query: 58 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 117 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 8682077 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 8682018 Query: 118 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgccacccccg 177 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||| Sbjct: 8682017 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgctaaccccg 8681958 Query: 178 tccctg 183 | |||| Sbjct: 8681957 ttcctg 8681952 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 231 cgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||| Sbjct: 8681901 cgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaac 8681842 Query: 291 gaccaag 297 || |||| Sbjct: 8681841 gagcaag 8681835 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 336 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 393 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 40197 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 40140 Score = 48.1 bits (24), Expect = 0.027 Identities = 60/72 (83%) Strand = Plus / Minus Query: 320 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 379 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 8677946 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 8677887 Query: 380 ggacaagtgggg 391 ||||||||||| Sbjct: 8677886 cgacaagtgggg 8677875 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 16524019 ccgcctcctcctccgcccgc 16524000
>dbj|AK073979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033077H09, full insert sequence Length = 679 Score = 163 bits (82), Expect = 7e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 58 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 117 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 101 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 160 Query: 118 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgccacccccg 177 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||| Sbjct: 161 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgctaaccccg 220 Query: 178 tccctg 183 | |||| Sbjct: 221 ttcctg 226 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 231 cgcatcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||| Sbjct: 277 cgcatcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaac 336 Query: 291 gaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgac 350 || ||||| ||| || ||| | | || |||||| |||||||| ||||| | ||| || Sbjct: 337 gagcaagtggacatgctgatgccaggaaatacagcaatcttgcggaatgcgagaatcgat 396 Query: 351 atgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| | || ||||||||||| || ||||||||||| Sbjct: 397 atgttcaagggctcaatgaggcttgctgtcgacaagtgggg 437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 72 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 131 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 7669227 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 7669286 Query: 132 accaacggccacaccctcatcgtcaaggtcgtgagcgccacccccgtccctggccgcg 189 |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 7669287 accagcggccacaccctcaccgtcaaggtcgtcagcgccacccccgtcccgggccgcg 7669344 Score = 145 bits (73), Expect = 2e-31 Identities = 166/193 (86%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 296 agttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgtt 355 ||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||||| Sbjct: 7671257 agttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatgtt 7671316 Query: 356 caaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacctgc 415 ||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 7671317 caaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacctgc 7671376 Query: 416 cagctttactgtgaatgaagagaac-acttgtcgc-agtagagtacgagctggtt-acgt 472 |||||||||||| || || || ||| ||||||| | ||||||||| ||| ||||| |||| Sbjct: 7671377 cagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaacgt 7671436 Query: 473 ggctgagtaattg 485 | | ||||||||| Sbjct: 7671437 gaccgagtaattg 7671449 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 220 cccgcgccccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatcttta 279 ||||| |||| |||||||||||||||||| | ||||||||||| ||| ||||| |||| | Sbjct: 7669369 cccgccccccgcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttca 7669428 Query: 280 ccgcccgcaacgaccaag 297 ||||||||||||| |||| Sbjct: 7669429 ccgcccgcaacgagcaag 7669446 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 90 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 149 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 31633542 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 31633483 Query: 150 atcgtcaaggt 160 ||| |||||| Sbjct: 31633482 gtcgccaaggt 31633472 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 333 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 31632392 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 31632334 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 234 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 292 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 31633398 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 31633340 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 9224436 cccgcctcctcctccgcccgc 9224456
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 72 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 131 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 79803 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 79862 Query: 132 accaacggccacaccctcatcgtcaaggtcgtgagcgccacccccgtccctggccgcg 189 |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 79863 accagcggccacaccctcaccgtcaaggtcgtcagcgccacccccgtcccgggccgcg 79920 Score = 145 bits (73), Expect = 2e-31 Identities = 166/193 (86%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 296 agttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgtt 355 ||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||||| Sbjct: 81833 agttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatgtt 81892 Query: 356 caaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacctgc 415 ||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 81893 caaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacctgc 81952 Query: 416 cagctttactgtgaatgaagagaac-acttgtcgc-agtagagtacgagctggtt-acgt 472 |||||||||||| || || || ||| ||||||| | ||||||||| ||| ||||| |||| Sbjct: 81953 cagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaacgt 82012 Query: 473 ggctgagtaattg 485 | | ||||||||| Sbjct: 82013 gaccgagtaattg 82025 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 220 cccgcgccccccgcatcgcggagtgcctcgtgggcgacgagactggctccatcatcttta 279 ||||| |||| |||||||||||||||||| | ||||||||||| ||| ||||| |||| | Sbjct: 79945 cccgccccccgcgcatcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttca 80004 Query: 280 ccgcccgcaacgaccaag 297 ||||||||||||| |||| Sbjct: 80005 ccgcccgcaacgagcaag 80022
>ref|NM_191269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 90 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 149 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 28 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 87 Query: 150 atcgtcaaggt 160 ||| |||||| Sbjct: 88 gtcgccaaggt 98 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 234 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 293 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 172 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacgag 231 Query: 294 caagttgacctgttgaaggctg 315 || ||||||||| ||||||||| Sbjct: 232 caggttgacctgatgaaggctg 253 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 333 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 271 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 329
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 90 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 149 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 47274 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 47215 Query: 150 atcgtcaaggt 160 ||| |||||| Sbjct: 47214 gtcgccaaggt 47204 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 333 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 46124 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 46066 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 234 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 292 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 47130 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 47072
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 90 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 149 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 146565 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 146506 Query: 150 atcgtcaaggt 160 ||| |||||| Sbjct: 146505 gtcgccaaggt 146495 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 333 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 145415 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 145357 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 234 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 292 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 146421 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 146363
>dbj|AK067551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108H01, full insert sequence Length = 868 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 90 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 149 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 79 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 138 Query: 150 atcgtcaaggt 160 ||| |||||| Sbjct: 139 gtcgccaaggt 149 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 234 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 293 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 223 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacgag 282 Query: 294 caagttgacctgttgaaggctg 315 || ||||||||| ||||||||| Sbjct: 283 caggttgacctgatgaaggctg 304 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 333 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 322 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 380
>dbj|AK071627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107F06, full insert sequence Length = 1006 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 235 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgacc 294 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| | | Sbjct: 350 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaaccaac 409 Query: 295 aagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgt 354 |||||||| || ||||| | || | || | |||||| |||||||| || |||||||||| Sbjct: 410 aagttgacttggtgaagccaggcaccacggtcatcttccgcaatgccaagattgacatgt 469 Query: 355 tcaa 358 |||| Sbjct: 470 tcaa 473
>dbj|AK067021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090L10, full insert sequence Length = 902 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 235 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgacc 294 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| | | Sbjct: 315 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaaccaac 374 Query: 295 aagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgt 354 |||||||| || ||||| | || | || | |||||| |||||||| || |||||||||| Sbjct: 375 aagttgacttggtgaagccaggcaccacggtcatcttccgcaatgccaagattgacatgt 434 Query: 355 tcaa 358 |||| Sbjct: 435 tcaa 438
>gb|DQ122779.1| Medicago sativa clone C4 unknown mRNA Length = 557 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 331 tgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggg 390 |||| ||||| |||||||||||||| |||| || ||||||||||| |||||||| |||| Sbjct: 341 tgcgaaatgcaaaaattgacatgtttaaaggatcaatgaggcttgctgtggacaaatggg 400 Query: 391 g 391 | Sbjct: 401 g 401
>gb|BT016179.1| Zea mays clone Contig12 mRNA sequence Length = 965 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 348 gacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 ||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 473 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 516
>gb|AY105519.1| Zea mays PCO124021 mRNA sequence Length = 802 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 348 gacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 391 ||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 439 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 482
>gb|L47612.1|PIAEMB10R Picea glauca EMB10 mRNA Length = 380 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 319 ctacagccatcttgcgcaatgctaaaattgacatgttcaaag 360 |||||| |||||||||||||||||| || |||||||| |||| Sbjct: 19 ctacagtcatcttgcgcaatgctaagatcgacatgtttaaag 60
>dbj|AK121085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064B05, full insert sequence Length = 756 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 336 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 393 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 377 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 434
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 336 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 393 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 40197 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 40140
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 336 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 393 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 49426 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 49369
>gb|AY104871.1| Zea mays PCO094431 mRNA sequence Length = 902 Score = 48.1 bits (24), Expect = 0.027 Identities = 66/80 (82%) Strand = Plus / Plus Query: 279 accgcccgcaacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaat 338 |||||||||||||| || |||||||| |||||| | | | | |||| ||||| |||||| Sbjct: 404 accgcccgcaacgaacaggttgaccttttgaagccagatacaacagtgatcttccgcaat 463 Query: 339 gctaaaattgacatgttcaa 358 || || ||||| |||||||| Sbjct: 464 gccaagattgatatgttcaa 483
>emb|AL160398.27| Human DNA sequence from clone RP11-15N12 on chromosome 6 Contains the 5' end of the gene for the possible ortholog of R. norvegicus ion transporter protein (NRITP), complete sequence Length = 134995 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 204 cccgcctcctcctccgcccgcgccccccgc 233 |||||||||||| || |||||||||||||| Sbjct: 9278 cccgcctcctccccctcccgcgccccccgc 9249
>gb|AY204467.1| Myxococcus xanthus clone C1164 hypothetical protein gene, partial cds; AgmH (agmH), hypothetical protein, and putative receptor protein genes, complete cds; and GTPase regulator gene, partial cds Length = 4328 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 cgcctcctcctccgcccgcgcccccc 231 ||||||||||||||||||||| |||| Sbjct: 3048 cgcctcctcctccgcccgcgcgcccc 3073
>gb|AC122159.30| Mus musculus strain 129/Sv clone ct7-575j15 map 10, complete sequence Length = 183491 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 114496 cccgcctcctcctccgcccgc 114516
>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence Length = 165177 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 136201 ggcaccaacggccacagcctcatcg 136225
>emb|AL590369.18| Human DNA sequence from clone RP11-483H20 on chromosome 9 Contains the 5' end of a novel gene (FLJ35803), the 3' end of the gene for AD-003 protein (AD-003), the ASB6 gene for ankyrin repeat and SOCS box-containing 6 (FLJ20548), two novel genes, the gene for paired related homeobox protein (PRX2) (PMX2, PRRX2), the 3' end of the PTGES gene for prostaglandin E synthase (PGES, PIG12, MGST-IV, MGST1L1, TP53I12, MGST1-L1) and six CpG islands, complete sequence Length = 125756 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cgccacccccgtccctggccg 187 ||||||||||||||||||||| Sbjct: 50573 cgccacccccgtccctggccg 50553
>gb|AY118844.1| Drosophila melanogaster GM13788 full insert cDNA Length = 2779 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 1368 ggcaccaacggccacagcctcatcg 1344
>emb|CR616613.1| full-length cDNA clone CS0DJ013YO16 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1290 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgccccccg 232 ||||||||||| ||||||||||||| Sbjct: 258 cctcctcctcctcccgcgccccccg 234
>emb|CR591716.1| full-length cDNA clone CS0DI054YB11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1201 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgccccccg 232 ||||||||||| ||||||||||||| Sbjct: 202 cctcctcctcctcccgcgccccccg 178
>ref|NM_079017.2| Drosophila melanogaster Heat shock protein cognate 5 CG8542-RA (Hsc70-5), mRNA Length = 2922 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 1532 ggcaccaacggccacagcctcatcg 1508
>ref|NM_078721.1| Drosophila melanogaster Ets at 21C CG2914-RA (Ets21C), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gcgcccgcctcctcctccgcc 221 ||||||||||||||||||||| Sbjct: 1876 gcgcccgcctcctcctccgcc 1896
>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone BACR16C17, complete sequence Length = 180425 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 22000 ggcaccaacggccacagcctcatcg 22024
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgcgccccccgc 233 ||||||||||||||| || |||||||||| Sbjct: 25666272 ccgcctcctcctccgtcctcgccccccgc 25666244 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 19240562 ctcctcctccgcccgcgccc 19240543
>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone BACR48E08, complete sequence Length = 182726 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gcgcccgcctcctcctccgcc 221 ||||||||||||||||||||| Sbjct: 109744 gcgcccgcctcctcctccgcc 109764
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 326 catcttgcgcaatgctaaaattgacatgttcaa 358 |||||| |||||||| || |||||||||||||| Sbjct: 219025 catcttccgcaatgccaagattgacatgttcaa 218993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcgcccgcctcctcctccgc 220 |||||||||||||||||||| Sbjct: 10040458 gcgcccgcctcctcctccgc 10040477 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 235 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| Sbjct: 219769 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaac 219714
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 1030 cccgcctcctcctccgcccgc 1050
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 124818 cccgcctcctcctccgcccgc 124838
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 326 catcttgcgcaatgctaaaattgacatgttcaa 358 |||||| |||||||| || |||||||||||||| Sbjct: 83921 catcttccgcaatgccaagattgacatgttcaa 83889 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 235 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| Sbjct: 84665 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaac 84610
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cgcccgcctcctcctccgccc 222 ||||||||||||||||||||| Sbjct: 4616 cgcccgcctcctcctccgccc 4596
>dbj|AK102391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E15, full insert sequence Length = 2778 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 225 cccgcctcctcctccgcccgc 245
>gb|AF105025.1|AF105025 Homo sapiens unknown mRNA Length = 1216 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgccccccg 232 ||||||||||| ||||||||||||| Sbjct: 159 cctcctcctcctcccgcgccccccg 135
>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete sequence Length = 229685 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 107062 ggcaccaacggccacagcctcatcg 107086
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcgcccgcctcctcctccgcc 221 ||||||||||||||||||||| Sbjct: 241723 gcgcccgcctcctcctccgcc 241703
>gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, region 21C5-21D1, P1 clone DS07610, complete sequence Length = 85095 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcgcccgcctcctcctccgcc 221 ||||||||||||||||||||| Sbjct: 7153 gcgcccgcctcctcctccgcc 7133
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 326 catcttgcgcaatgctaaaattgacatgttcaa 358 |||||| |||||||| || |||||||||||||| Sbjct: 1517 catcttccgcaatgccaagattgacatgttcaa 1549 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 235 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaac 290 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| Sbjct: 773 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaac 828
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgcgccccccgc 233 ||||||||||||||| || |||||||||| Sbjct: 25594448 ccgcctcctcctccgtcctcgccccccgc 25594420 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 19166789 ctcctcctccgcccgcgccc 19166770
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgcgccccccgc 233 ||||||||||||||| || |||||||||| Sbjct: 33510 ccgcctcctcctccgtcctcgccccccgc 33482
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgcgccccccgc 233 ||||||||||||||| || |||||||||| Sbjct: 7402 ccgcctcctcctccgtcctcgccccccgc 7430
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgccccccg 232 ||||||||||| ||||||||||||| Sbjct: 109754 cctcctcctcctcccgcgccccccg 109730
>dbj|AP006412.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301c, complete sequence Length = 48718 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 93 aagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacac 145 |||||||||||| ||| ||||| |||||||| || || |||||||| ||||| Sbjct: 24210 aagcctgtgttcaccaaagtggatcagctcaaaccaggaaccaacggtcacac 24262
>gb|AC170752.2| Mus musculus BAC clone RP23-116B8 from chromosome 10, complete sequence Length = 194054 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cccgcctcctcctccgcccgc 224 ||||||||||||||||||||| Sbjct: 115888 cccgcctcctcctccgcccgc 115868
>gb|L01502.1|DROHSC5A Drosophila melanogaster heat shock protein cognate 71 (Hsc5) mRNA, complete cds Length = 2897 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 ggcaccaacggccacaccctcatcg 153 |||||||||||||||| |||||||| Sbjct: 1507 ggcaccaacggccacagcctcatcg 1483
>dbj|AB061844.1| Homo sapiens RPS25 gene for ribosomal protein S25, complete cds and sequence Length = 3793 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 cctcctcctccgcccgcgccccccg 232 ||||||||||| ||||||||||||| Sbjct: 601 cctcctcctcctcccgcgccccccg 625
>ref|XM_480193.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 107 ctcctcctccgcccgcgccc 126
>ref|XM_507137.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498E12.110 mRNA Length = 1578 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 113 ctcctcctccgcccgcgccc 132
>ref|XM_470383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgcccgcctcctcctccgcc 221 |||||||||||||||||||| Sbjct: 357 cgcccgcctcctcctccgcc 376
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 22758 ccgcctcctcctccgcccgc 22739
>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence Length = 143300 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 60970 ctcctccgcccgcgcccccc 60951
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gccccccgcatcgcggagtgcctc 248 |||| ||||||||||||||||||| Sbjct: 2006459 gccctccgcatcgcggagtgcctc 2006436
>ref|XM_952891.1| Neurospora crassa OR74A hypothetical protein (NCU07512.1) partial mRNA Length = 2226 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 gcgcccgcctcctcctccgcccgc 224 ||||||||||||| |||||||||| Sbjct: 491 gcgcccgcctcctgctccgcccgc 468
>ref|XM_957777.1| Neurospora crassa OR74A hypothetical protein (NCU06266.1) partial mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 cctcctcctccgcccgcgcc 227 |||||||||||||||||||| Sbjct: 224 cctcctcctccgcccgcgcc 243
>ref|XM_326120.1| Neurospora crassa OR74A hypothetical protein (NCU06266.1) partial mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 cctcctcctccgcccgcgcc 227 |||||||||||||||||||| Sbjct: 224 cctcctcctccgcccgcgcc 243
>ref|XM_327797.1| Neurospora crassa OR74A hypothetical protein (NCU07512.1) partial mRNA Length = 2226 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 gcgcccgcctcctcctccgcccgc 224 ||||||||||||| |||||||||| Sbjct: 491 gcgcccgcctcctgctccgcccgc 468
>gb|AF544099.1| Zea mays subsp. mays cultivar W153R granule-bound starch synthase (waxy1) gene, partial sequence Length = 4433 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 527 ctcctccgcccgcgcccccc 508
>gb|AF544098.1| Zea mays subsp. mays cultivar Tx601 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4427 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 527 ctcctccgcccgcgcccccc 508
>gb|AF544096.1| Zea mays subsp. mays cultivar Pa91 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4274 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 367 ctcctccgcccgcgcccccc 348
>gb|AF544094.1| Zea mays subsp. mays cultivar Oh43 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4449 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 532 ctcctccgcccgcgcccccc 513
>gb|AF544093.1| Zea mays subsp. mays cultivar NC348 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4449 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 542 ctcctccgcccgcgcccccc 523
>gb|AF544092.1| Zea mays subsp. mays cultivar NC260 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4287 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 381 ctcctccgcccgcgcccccc 362
>gb|AF544091.1| Zea mays subsp. mays cultivar N28Ht granule-bound starch synthase (waxy1) gene, partial sequence Length = 4477 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 559 ctcctccgcccgcgcccccc 540
>gb|AF544089.1| Zea mays subsp. mays cultivar M162W granule-bound starch synthase (waxy1) gene, partial sequence Length = 4395 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 527 ctcctccgcccgcgcccccc 508
>gb|AF544088.1| Zea mays subsp. mays cultivar Ky21 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4470 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 558 ctcctccgcccgcgcccccc 539
>gb|AF544086.1| Zea mays subsp. mays cultivar Ki9 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4246 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 564 ctcctccgcccgcgcccccc 545
>gb|AF544084.1| Zea mays subsp. mays cultivar IDS28 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4433 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 527 ctcctccgcccgcgcccccc 508
>gb|AF544083.1| Zea mays subsp. mays cultivar I205 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4444 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 527 ctcctccgcccgcgcccccc 508
>gb|AF544081.1| Zea mays subsp. mays cultivar F2 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4475 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 564 ctcctccgcccgcgcccccc 545
>gb|AF544079.1| Zea mays subsp. mays cultivar D940Y granule-bound starch synthase (waxy1) gene, partial sequence Length = 4090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 541 ctcctccgcccgcgcccccc 522
>gb|AF544076.1| Zea mays subsp. mays cultivar CML254 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4416 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 569 ctcctccgcccgcgcccccc 550
>gb|AF544074.1| Zea mays subsp. mays cultivar B97 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4484 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 569 ctcctccgcccgcgcccccc 550
>gb|AF544073.1| Zea mays subsp. mays cultivar B73 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4294 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 882 ctcctccgcccgcgcccccc 863
>gb|AF544072.1| Zea mays subsp. mays cultivar B37 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4420 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 532 ctcctccgcccgcgcccccc 513
>gb|AF544071.1| Zea mays subsp. mays cultivar B14A granule-bound starch synthase (waxy1) gene, partial sequence Length = 4467 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 559 ctcctccgcccgcgcccccc 540
>gb|AF544070.1| Zea mays subsp. mays cultivar B103 granule-bound starch synthase (waxy1) gene, partial sequence Length = 4481 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 559 ctcctccgcccgcgcccccc 540
>gb|AF544068.1| Zea mays subsp. mays cultivar A272 granule-bound starch synthase (waxy1) gene, partial sequence Length = 3427 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 542 ctcctccgcccgcgcccccc 523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cgcccgcctcctcctccgcc 221 |||||||||||||||||||| Sbjct: 35169772 cgcccgcctcctcctccgcc 35169753
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cgcccgcctcctcctccgcc 221 |||||||||||||||||||| Sbjct: 48533 cgcccgcctcctcctccgcc 48514
>ref|XM_847288.1| PREDICTED: Canis familiaris similar to CG12199-PA, isoform A (LOC609936), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ggcggcgcagggcggcgaga 78 |||||||||||||||||||| Sbjct: 244 ggcggcgcagggcggcgaga 225
>ref|XM_541520.2| PREDICTED: Canis familiaris similar to Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (LOC484405), mRNA Length = 3609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cctccgcccgcgccccccgc 233 |||||||||||||||||||| Sbjct: 2864 cctccgcccgcgccccccgc 2845
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 193389 gcccgcctcctcctccccccgcgtcccc 193416
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgcgccc 228 |||||||| ||||||||||||||| Sbjct: 86541 ccgcctccgcctccgcccgcgccc 86564
>gb|AC133680.2| Homo sapiens 3 BAC RP11-102C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130370 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ggagggtagaagctacagaa 410 |||||||||||||||||||| Sbjct: 118477 ggagggtagaagctacagaa 118458
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cccgcctcctcctccgcccgcgcc 227 ||||||||||||||||||| |||| Sbjct: 34275 cccgcctcctcctccgcccccgcc 34298
>gb|BT023757.1| Drosophila melanogaster RE56180 full insert cDNA Length = 4661 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2514 ccgcctcctcctccgcccgc 2495
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgcgtgcgcactggtgcgcc 205 |||||||||||||||||||| Sbjct: 2754002 cgcgtgcgcactggtgcgcc 2754021
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gaagcctgtgttcgtcaagg 111 |||||||||||||||||||| Sbjct: 172583 gaagcctgtgttcgtcaagg 172564
>gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q22.2, complete sequence Length = 135578 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 75586 gcccgcctcctcctccccccgcgtcccc 75613
>gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85446 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tcgtcaaggtggaccagctc 122 |||||||||||||||||||| Sbjct: 69274 tcgtcaaggtggaccagctc 69293
>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence Length = 165072 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgcgccc 228 ||||||||||| |||||||||||| Sbjct: 105915 ccgcctcctccgccgcccgcgccc 105938
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 77457 ccgcctcctcctccgcccgc 77438
>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 42579 ccgcctcctcctccgcccgc 42598
>emb|CR625629.1| full-length cDNA clone CS0DC009YF14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1536 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 37 gcccgcctcctcctccccccgcgtcccc 10
>ref|NM_206671.1| Drosophila melanogaster AP-1 CG9113-RE, transcript variant E (AP-1gamma), mRNA Length = 3424 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2515 ccgcctcctcctccgcccgc 2496
>ref|NM_176718.1| Drosophila melanogaster AP-1 CG9113-RD, transcript variant D (AP-1gamma), mRNA Length = 3441 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2532 ccgcctcctcctccgcccgc 2513
>ref|NM_176717.1| Drosophila melanogaster AP-1 CG9113-RC, transcript variant C (AP-1gamma), mRNA Length = 3486 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2577 ccgcctcctcctccgcccgc 2558
>ref|NM_167178.2| Drosophila melanogaster AP-1 CG9113-RB, transcript variant B (AP-1gamma), mRNA Length = 3423 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2514 ccgcctcctcctccgcccgc 2495
>ref|NM_132299.3| Drosophila melanogaster AP-1 CG9113-RA, transcript variant A (AP-1gamma), mRNA Length = 3468 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 2559 ccgcctcctcctccgcccgc 2540
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 82452 gcccgcctcctcctccccccgcgtcccc 82425
>gb|AC105900.2| Homo sapiens chromosome 3 clone RP11-30P17, complete sequence Length = 148377 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ggagggtagaagctacagaa 410 |||||||||||||||||||| Sbjct: 110319 ggagggtagaagctacagaa 110338
>gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, complete sequence Length = 148045 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cctccgcccgcgccccccgc 233 |||||||||||||||||||| Sbjct: 72869 cctccgcccgcgccccccgc 72888
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tcccgacgatgtcgacagcg 59 |||||||||||||||||||| Sbjct: 577710 tcccgacgatgtcgacagcg 577691
>emb|AL112249.1|CNS019Y9 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 tcatcgtcaaggtcgtgagc 167 |||||||||||||||||||| Sbjct: 166 tcatcgtcaaggtcgtgagc 147
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cccgcctcctcctccgcccgcgcc 227 ||||||||||||||||||| |||| Sbjct: 5315940 cccgcctcctcctccgcccccgcc 5315917
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 acagcggcggcgcagggcggcgag 77 |||||||||||||| ||||||||| Sbjct: 13235395 acagcggcggcgcaaggcggcgag 13235372
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 3414333 ctcctcctccgcccgcgccc 3414352
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cgcccgcctcctcctccgcc 221 |||||||||||||||||||| Sbjct: 35259844 cgcccgcctcctcctccgcc 35259825
>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174487 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 144263 ccgcctcctcctccgcccgc 144244
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cggcgcagggcggcgagaag 80 |||||||||||||||||||| Sbjct: 813667 cggcgcagggcggcgagaag 813686
>gb|AF466932.1| Zea mays clone BAC 206C17, complete sequence Length = 99156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 catctttaccgcccgcaacgacca 295 |||||||| ||||||||||||||| Sbjct: 59382 catctttaacgcccgcaacgacca 59405
>gb|AF151862.1|AF151862 Homo sapiens CGI-104 protein mRNA, complete cds Length = 1192 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgcccccc 231 ||||||||||| |||||||||||| Sbjct: 158 cctcctcctcctcccgcgcccccc 135
>gb|AC011362.2|AC011362 Homo sapiens chromosome 5 clone CTC-503K11, complete sequence Length = 176029 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 92753 ccgcctcctcctccgcccgc 92772
>gb|AC008509.5|AC008509 Homo sapiens chromosome 5 clone CTC-449I11, complete sequence Length = 189456 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 186141 ccgcctcctcctccgcccgc 186122
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcgcccgcctcctcctccgc 220 |||||||||||||||||||| Sbjct: 114023 gcgcccgcctcctcctccgc 114042
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcgcccgcctcctcctccgc 220 |||||||||||||||||||| Sbjct: 6824 gcgcccgcctcctcctccgc 6843
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 acagcggcggcgcagggcggcgag 77 |||||||||||||| ||||||||| Sbjct: 56829 acagcggcggcgcaaggcggcgag 56806
>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete sequences Length = 152714 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 78744 gcccgcctcctcctccccccgcgtcccc 78771
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 47752 ctcctcctccgcccgcgccc 47771
>emb|X03935.1|ZMWAXY Zea mays waxy (wx+) locus for UDP-glucose starch glycosyl transferase Length = 4800 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ctcctccgcccgcgcccccc 231 |||||||||||||||||||| Sbjct: 787 ctcctccgcccgcgcccccc 768
>gb|AF227976.1|AF227976 Mytilus edulis topoisomerase II mRNA, partial cds Length = 678 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agctacagaacctgccagct 420 |||||||||||||||||||| Sbjct: 621 agctacagaacctgccagct 602
>emb|AJ333611.1|HSA333611 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CL14RS Length = 689 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 217 gcccgcctcctcctccccccgcgtcccc 244
>dbj|AK101134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026G01, full insert sequence Length = 1570 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 107 ctcctcctccgcccgcgccc 126
>dbj|AK099690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D10, full insert sequence Length = 2977 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 411 ctcctcctccgcccgcgccc 392
>dbj|AK068101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129K10, full insert sequence Length = 1746 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgcccgcctcctcctccgcc 221 |||||||||||||||||||| Sbjct: 357 cgcccgcctcctcctccgcc 376
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 122520 ccgcctcctcctccgcccgc 122501 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 4497 ccgcctcctcctccgcccgc 4516
>dbj|AK060393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A11, full insert sequence Length = 1576 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 111 ctcctcctccgcccgcgccc 130
>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence Length = 173384 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 gcccgcctcctcctccgcccgcgccccc 230 |||||||||||||||| |||||| |||| Sbjct: 45484 gcccgcctcctcctccccccgcgtcccc 45511
>gb|AY105201.1| Zea mays PCO093185 mRNA sequence Length = 1261 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cctcctcctccgcccgcgcccccc 231 ||||||||||||||| |||||||| Sbjct: 1167 cctcctcctccgcccccgcccccc 1144
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 66398 ccgcctcctcctccgcccgc 66379
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cccgcctcctcctccgcccgcgcc 227 ||||||||||||||||||| |||| Sbjct: 5382417 cccgcctcctcctccgcccccgcc 5382394
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ctcctcctccgcccgcgccc 228 |||||||||||||||||||| Sbjct: 73892 ctcctcctccgcccgcgccc 73873
>emb|AL928876.12| Mouse DNA sequence from clone RP23-236O6 on chromosome 2, complete sequence Length = 201545 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gacaagtgggggagggtaga 400 |||||||||||||||||||| Sbjct: 157298 gacaagtgggggagggtaga 157279
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gcgccccccgcatcgcggag 242 |||||||||||||||||||| Sbjct: 612257 gcgccccccgcatcgcggag 612276
>dbj|AB209006.1| Homo sapiens mRNA for SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b variant protein Length = 4271 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccgcctcctcctccgcccgc 224 |||||||||||||||||||| Sbjct: 49 ccgcctcctcctccgcccgc 30
>emb|AL929430.4| Mouse DNA sequence from clone RP23-459J19 on chromosome 4, complete sequence Length = 36758 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gaatgaagagaacacttgtc 447 |||||||||||||||||||| Sbjct: 12216 gaatgaagagaacacttgtc 12197 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,892,198 Number of Sequences: 3902068 Number of extensions: 3892198 Number of successful extensions: 86035 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84290 Number of HSP's gapped (non-prelim): 1739 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)