ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61b07 |
|---|---|
| Clone Library Name | barley_pub |
>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 39.7 bits (91), Expect = 0.004 Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Frame = +1 Query: 127 LVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHMAFCSSXXXXXXXXXXX 303 LV+ + +W FL+ +++N IL+ K+YN+ P+P ++++H+A Sbjct: 103 LVTGFFFFMWYFLN---VIFN--ILNKKIYNYFPYPYFVSVIHLAV----GVVYCLGSWT 153 Query: 304 XDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 LP + + + ++P+G ++L SN ++ ++VSF +KAL P Sbjct: 154 VGLPKRAPVDSNIL-KLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEP 204
>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E29) Length = 404 Score = 39.3 bits (90), Expect = 0.005 Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%) Frame = +1 Query: 127 LVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHM----AFCSSXXXXXXX 291 LV+ + +W FL+ +++N IL+ K+YN+ P+P ++++H+ +C + Sbjct: 100 LVTGSFFFMWYFLN---VIFN--ILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVG-- 152 Query: 292 XXXXXDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 LP M ++L ++P+ +++ SN ++ ++VSF +KAL P Sbjct: 153 ------LPKRAPMDSKLL-KLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEP 201
>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 408 Score = 37.4 bits (85), Expect = 0.020 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%) Frame = +1 Query: 127 LVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHMAFCSSXXXXXXXXXXX 303 LV+ + +W FL+ +++N IL+ K+YN+ P+P ++ +H+A Sbjct: 104 LVTGFFFFMWYFLN---VIFN--ILNKKIYNYFPYPYFVSAIHLAV----GVVYCLGGWA 154 Query: 304 XDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 LP M + L ++P+ ++L SN ++ ++VSF +K+L P Sbjct: 155 VGLPKRAPMDSNLL-KLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEP 205
>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 36.2 bits (82), Expect = 0.045 Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Frame = +1 Query: 127 LVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHM----AFCSSXXXXXXX 291 LV+ + +W FL+ +++N IL+ K+YN+ P+P ++++H+ +C Sbjct: 103 LVTGILLLMWYFLN---VIFN--ILNKKIYNYFPYPYFVSVIHLFVGVVYC--------L 149 Query: 292 XXXXXDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 LP + + + ++P+ +++ SN ++ ++VSF +KAL P Sbjct: 150 VSWSVGLPKRAPVNSDIL-KVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEP 204
>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (E29) Length = 414 Score = 36.2 bits (82), Expect = 0.045 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Frame = +1 Query: 118 RKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHMAFCSSXXXXXXXX 294 + L + + +W FL+ +++N IL+ K+YN+ P+P ++++H+A Sbjct: 107 KATLTTGFFFFMWYFLN---VIFN--ILNKKIYNYFPYPYFVSVIHLAV----GVVYCLV 157 Query: 295 XXXXDLPS-SPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 LP +P +TQL + P+ ++L SN ++ + VSF +KAL P Sbjct: 158 SWGVGLPKRAPIDSTQL--KLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEP 211
>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E30) Length = 402 Score = 35.4 bits (80), Expect = 0.077 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Frame = +1 Query: 154 WIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHMAFCSSXXXXXXXXXXXXDLPSSPAM 330 W FL+ +++N IL+ K+YN+ P+P ++++H+A LP + Sbjct: 107 WYFLN---VIFN--ILNKKIYNYFPYPYFVSVIHLAV----GVVYCLVSWTVGLPKRAPI 157 Query: 331 TTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 L ++P+ ++L SN ++ ++VSF +KAL P Sbjct: 158 DGNLL-KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEP 199
>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 409 Score = 34.7 bits (78), Expect = 0.13 Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Frame = +1 Query: 127 LVSYCYVAVWIFLSFTVIVYNKYILDPKMYNW-PFPISLTMVHMAFCSSXXXXXXXXXXX 303 LV+ + +W FL+ +++N IL+ K+YN+ P+P ++++H+ Sbjct: 106 LVTGFFFFMWYFLN---VIFN--ILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLP 160 Query: 304 XDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 P + + L+ P+ + + SN ++ ++VSF +KAL P Sbjct: 161 KRAPINGTLLKLLF-----PVALCHGIGHITSNVSFAAVAVSFAHTIKALEP 207
>FUCT1_HUMAN (Q96A29) GDP-fucose transporter 1 (Solute carrier family 35 member| C1) Length = 364 Score = 34.7 bits (78), Expect = 0.13 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%) Frame = +1 Query: 112 VLRKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLT----MVHMAFCSSXXX 279 +LR + ++ W+ S +++ NKY+LD PI +T +V C Sbjct: 35 LLRALQIALVVSLYWV-TSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 93 Query: 280 XXXXXXXXXDLPSSPAMTTQLYTS-SVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALM 456 D PS + L + SVLP+ ++ + F+N Y+ V+F + ++L Sbjct: 94 LAACCPGAVDFPS---LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLT 150 Query: 457 PV 462 V Sbjct: 151 TV 152
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 33.9 bits (76), Expect = 0.22 Identities = 28/115 (24%), Positives = 52/115 (45%) Frame = +1 Query: 115 LRKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLTMVHMAFCSSXXXXXXXX 294 + KVL A+W + +YNK +L P+++T+V A S Sbjct: 96 MTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHA----PMTVTLVQFAVGS----VLITF 147 Query: 295 XXXXDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 +L P ++ +++LP+ +++L F+N + +SVSF +KA+ P Sbjct: 148 MWALNLYKRPKISAA-QLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEP 201
>FUCT1_DROME (Q9VHT4) Probable GDP-fucose transporter| Length = 337 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 4/121 (3%) Frame = +1 Query: 112 VLRKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLT----MVHMAFCSSXXX 279 ++ K L + V+++ S + NK++L N P+ ++ +V C Sbjct: 11 LVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVASR 70 Query: 280 XXXXXXXXXDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 P + + +LP+ LY+L + +N + Y++V+F + ++L Sbjct: 71 LSRKYPSVFTFPEGNPLDIDTFRK-ILPLSVLYTLMIGANNLSLSYVTVAFYYIGRSLTT 129 Query: 460 V 462 V Sbjct: 130 V 130
>YMD8_YEAST (Q03697) Hypothetical 49.6 kDa protein in CAT2-AMD1 intergenic| region Length = 442 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 4/111 (3%) Frame = +1 Query: 130 VSYCYVAVWIFLSFTVIVYNKYILDPK-MYNWPFPISLTMVHMA---FCSSXXXXXXXXX 297 V +V W F S + +YN+++ DPK +P+ +T H A S Sbjct: 5 VFLAFVFGWYFCSIALSIYNRWMFDPKDGLGIGYPVLVTTFHQATLWLLSGIYIKLRHKP 64 Query: 298 XXXDLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKA 450 L + + +LP + + SN ++ Y+ ++ ++K+ Sbjct: 65 VKNVLRKNNGFNWSFFLKFLLPTAVASAGDIGLSNVSFQYVPLTIYTIIKS 115
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/106 (21%), Positives = 41/106 (38%) Frame = +1 Query: 142 YVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLTMVHMAFCSSXXXXXXXXXXXXDLPSS 321 Y A W L+ +YNK +L+ Y W LT C S D P Sbjct: 100 YFATWWALNVVFNIYNKKVLNAFPYPW-----LTSTLSLACGSLMMLVSWATRIADAPK- 153 Query: 322 PAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMP 459 T + ++ P+ +++ + + ++VSF ++K+ P Sbjct: 154 ---TDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 196
>CHS1_SCHPO (P30597) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) Length = 859 Score = 30.4 bits (67), Expect = 2.5 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Frame = +1 Query: 145 VAVWIFLSFTVIVY-----NKYILDPKMY-NWPFPISLTMVHMAFCSSXXXXXXXXXXXX 306 +A+WI+ S V + N+ P Y + S+ M ++ FCS Sbjct: 584 IAIWIYASLLVTCFVLALGNRPHGSPNFYLSMVIMYSILMGYLLFCSGWIAYRAIS---- 639 Query: 307 DLPSSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFI 435 D + + T+ YTS++L ++ + S++ +YL VS I Sbjct: 640 DAIHNASSTSSSYTSALLNSNVFINIVISLSSTYGMYLVVSII 682
>FUCT1_CAEEL (Q968A5) GDP-fucose transporter| Length = 363 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Frame = +1 Query: 148 AVWIFLSFTVIVYNKYILDPKMYNWPFPIS----LTMVHMAFCSSXXXXXXXXXXXXDLP 315 A W+F S ++ NKY+L + P I+ L V + S +P Sbjct: 36 AYWVF-SIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAYGLFKFPSMP 94 Query: 316 SSPAMTTQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPV 462 ++ + VLP+ ++ + F+N Y+ VSF + ++L V Sbjct: 95 IDAKISRE-----VLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTV 138
>HIS5_BIFLO (Q8G4S6) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 215 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -1 Query: 144 VAVGDEHLAEHRLRHGPLAAGLLRHGSGGAAGGSVIRLRA 25 V VG++ + EH L HG AAG+ G GGSV L A Sbjct: 80 VCVGEQIMFEHGLEHGAHAAGI------GLIGGSVNLLDA 113
>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I| Length = 374 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = +1 Query: 115 LRKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLTMVHM 255 + +V++ V W F S + + NK+I ++ FP+ L+ M Sbjct: 47 ITRVVIIVLIVLAWYFFSLLLSMMNKWIFSESKMDFQFPLFLSSCQM 93
>SMS1_CHICK (Q7T3T4) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Sphingomyelin synthase 1) (MOB protein) Length = 417 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = +1 Query: 103 SESVLRKVLVSYCYVAVWIFLSFTVIVYNKYILDPKMYNWPFP 231 ++ VL++ + VW + F N + P+ Y+WPFP Sbjct: 356 NQQVLKEASQTNLLARVWWYKPFQYFEKNVQGIVPRSYHWPFP 398
>SYV_SULSO (Q97ZK9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 842 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 151 VWIFLSFTVIVYNKYILDPKMYNWPFPISLTM 246 VWI S TV+ K+ D ++N FP SL + Sbjct: 499 VWIDSSVTVLYLTKFYEDKNVFNRTFPASLRL 530 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,204,543 Number of Sequences: 219361 Number of extensions: 369032 Number of successful extensions: 1195 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1184 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
