>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 390 PCTRPTSAASRTPTPRASGRSTSRPRGA 307
           P TRP    SRTP P+ +  ST  PR A
Sbjct: 709 PSTRPIRRVSRTPEPKKTKASTPSPRSA 736

>UL49_HHV11 (P10233) Tegument protein UL49|
          Length = 301

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 384 TRPTSAASR-TPTPRASGRSTSRPR 313
           TR  SAASR T  PRA  RS SRPR
Sbjct: 273 TRGRSAASRPTERPRAPARSASRPR 297

>FPG_GLUOX (Q5FN17) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 276

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 7/34 (20%)
 Frame = +3

Query: 12  RGRQPPLRSALLCSPLSSG-------EAMARCGV 92
           RGR+ P++SALL   L +G       EA+ RCG+
Sbjct: 153 RGRRSPIKSALLDQKLIAGLGNIYVCEALFRCGI 186

>FLIE_BRUSU (P67707) Flagellar hook-basal body complex protein fliE|
          Length = 111

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 168 RGSGASARLQLVPAAPGASLAE 233
           +G G+++  Q VPAAPGAS  E
Sbjct: 24  KGVGSASAPQAVPAAPGASFGE 45

>FLIE_BRUME (P67706) Flagellar hook-basal body complex protein fliE|
          Length = 111

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 168 RGSGASARLQLVPAAPGASLAE 233
           +G G+++  Q VPAAPGAS  E
Sbjct: 24  KGVGSASAPQAVPAAPGASFGE 45

>SRBS1_HUMAN (Q9BX66) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
           (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
           (SH3P12)
          Length = 1292

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 159 QHRRGSGASARLQLVPAAPGASLAERAQDDRHR 257
           + R G   SA  Q  P +PG ++ +RA+DD  R
Sbjct: 333 ERRVGEQDSAPTQEKPTSPGKAIEKRAKDDSRR 365

>PTPA2_ASPOR (Q2UCL6) Serine/threonine-protein phosphatase 2A activator 2 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2)
           (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl
           phosphatase activator 2)
          Length = 422

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 198 LVPAAPGASLAERAQDDRHRHAY 266
           L+PAAPG   A+  Q D H H +
Sbjct: 356 LIPAAPGMGEADDVQTDGHDHTH 378

>V120_HHV11 (P10221) Capsid assembly protein UL37|
          Length = 1123

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 263  LHLREAGXXXXXXKPAPRGRDVDRPDARGVGVRDAADVGRVH 388
            L +R+AG       PAP   D  +P+A G G R A   G  H
Sbjct: 1058 LEVRDAGNSL----PAPMPMDAQKPEAYGHGPRQADREGAPH 1095

>VGLC_VZVD (P09256) Glycoprotein GPV|
          Length = 560

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 390 PCTRPTSAASRTPTPRASGRSTSRP 316
           P   PTSAASR P P A+ + +  P
Sbjct: 126 PAVAPTSAASRKPDPAANTQHSQPP 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,257,367
Number of Sequences: 219361
Number of extensions: 502290
Number of successful extensions: 1894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)