ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61a05 |
|---|---|
| Clone Library Name | barley_pub |
>WS17_SCHMA (Q26544) WD-repeat protein SL1-17| Length = 301 Score = 53.1 bits (126), Expect = 2e-07 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXX 271 AH++ IW W + R ++TGS+D + AW+ + GH LGV+S+ Sbjct: 11 AHKEGIWCCTWGENRN-RNKQYIITGSLDNGLIAWEWTNSQLKCLYQFEGHRLGVISVDI 69 Query: 272 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 S+DS I ++D+++G T D P++ W + Sbjct: 70 NSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTI 109 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/76 (23%), Positives = 31/76 (40%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 LL + S D+ ++ + D + P GH VVS+ S D +R++D+ Sbjct: 200 LLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLVTASTDCSVRIWDLA 259 Query: 338 SGASVTTLDAAPSEVW 385 S + +VW Sbjct: 260 SKEEKHCFNTHEDQVW 275
>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 777 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/98 (25%), Positives = 39/98 (39%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 277 H +WA ++ P + L +GS D T+R W D GH ++ L Sbjct: 506 HRRGVWACSFNPFSRQ-----LASGSGDRTIRIWNVDTQQCVQT-LEGHTGAILKLIYIS 559 Query: 278 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 + D ++V+ + SG V TLD VW + Sbjct: 560 QGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL 597
>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1| Length = 1356 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/89 (28%), Positives = 38/89 (42%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 277 H DS+W+ A+ P + +GSID T++ W + GH V S+ Sbjct: 1092 HGDSVWSVAFSPDGQR-----VASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSP 1145 Query: 278 XXXXXXXVSIDSHIRVFDVDSGASVTTLD 364 SID I+++D SG TL+ Sbjct: 1146 DGQRVASGSIDGTIKIWDAASGTCTQTLE 1174 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +2 Query: 125 WVPAADHRPTAL-LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 301 WV + P + +GS D T++ W + GH V S+ Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQRVASG 1111 Query: 302 SIDSHIRVFDVDSGASVTTLD 364 SID I+++D SG TL+ Sbjct: 1112 SIDGTIKIWDAASGTCTQTLE 1132
>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)| (COMPASS component swd3) (Complex proteins associated with set1 protein swd3) Length = 380 Score = 38.5 bits (88), Expect = 0.004 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = +2 Query: 125 WVPAADHRPTA-LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 298 +V + D P LL++GS DETVR W D + PA H+ ++S+ Sbjct: 140 YVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPA--HSEPIISVSISADGTLCAT 197 Query: 299 VSIDSHIRVFDVDSGASVTTL 361 S D R++DV SG + TL Sbjct: 198 ASYDGMARIWDVLSGQCLKTL 218
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 37.0 bits (84), Expect = 0.011 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = +2 Query: 167 TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 346 TGS D+ ++ W D+ A H LG+ S D+ +++FDV SGA Sbjct: 230 TGSADKQIKVWNTVDMTYLQTLAS-HQLGINDFSWSSNSQFIASASDDTTVKIFDVISGA 288 Query: 347 SVTTL 361 + T+ Sbjct: 289 CLRTM 293 Score = 34.3 bits (77), Expect = 0.074 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +2 Query: 152 TALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 328 ++L+ + DETVR W L V PA H+ + S+ S D IRV+ Sbjct: 309 SSLIASAGFDETVRVWDFKTGLCVKCIPA--HSDPITSISYNHDGNTMATSSYDGCIRVW 366 Query: 329 DVDSGASVTTL---DAAP 373 D SG+ + TL D AP Sbjct: 367 DAASGSCLKTLVDTDHAP 384
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Frame = +2 Query: 38 LRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ---PD 208 L ER EG DG H+DS+++ A+ P + L++GS+D+T++ W+ P Sbjct: 460 LAERLEGP---------DG-HKDSVYSVAFSPDGRN-----LVSGSLDKTIKMWELSAPR 504 Query: 209 DLAVASPPAGGHAL 250 + ++PP GG + Sbjct: 505 GIPSSAPPKGGRCI 518
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 36.2 bits (82), Expect = 0.019 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1113 PGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172 Query: 109 R 107 + Sbjct: 1173 K 1173 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGPR 1218 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1288 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781 Score = 28.5 bits (62), Expect = 4.1 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 113 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 996 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPG 1054 Query: 112 ------DRVLVSPVHRL 80 DR L PV L Sbjct: 1055 LRGFPGDRGLPGPVGAL 1071 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 17/72 (23%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 158 +PG + +G + PP G+ G G+PG DGL GE+ Sbjct: 584 EPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643 Query: 157 RRGAVVSSGHPG 122 RG SG PG Sbjct: 644 HRGDPGPSGPPG 655
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1115 PGPAGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174 Query: 109 R 107 + Sbjct: 1175 K 1175 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 158 +PG M +G + PP G+ G G+PG DGL GE+ Sbjct: 586 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 645 Query: 157 RRGAVVSSGHPG 122 RG SG PG Sbjct: 646 HRGDPGPSGPPG 657 Score = 28.1 bits (61), Expect = 5.3 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 113 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 998 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGVAGKEGTKGDPGPAGLPGKDGPPG 1056 Query: 112 ------DRVLVSPVHRL 80 DR L PV L Sbjct: 1057 LRGFPGDRGLPGPVGAL 1073
>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 817 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/78 (28%), Positives = 32/78 (41%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 LL T S D+TV+ W D +V GH V D I+++D Sbjct: 547 LLATSSGDKTVKIWSLDTFSVMKT-LEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCS 605 Query: 338 SGASVTTLDAAPSEVWGV 391 SG + TLD + +W + Sbjct: 606 SGECLKTLDGHNNRLWAL 623
>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4| Length = 395 Score = 35.8 bits (81), Expect = 0.025 Identities = 26/92 (28%), Positives = 39/92 (42%) Frame = +2 Query: 86 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 265 + AH+ SI + P + + +GS D +++ W+ D V GH LG+ Sbjct: 102 IPNAHKKSISGIKFSPDGRY-----MGSGSADCSIKIWRMD--FVYEKTLMGHRLGINEF 154 Query: 266 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTTL 361 S D ++VFDV SG V TL Sbjct: 155 SWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTL 186 Score = 31.2 bits (69), Expect = 0.63 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 158 LLLTGSIDETVRAW-QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 334 L+ +GS DET+R W + + S P GH V S+ S D +R++D Sbjct: 204 LIASGSFDETIRIWCARNGNTIFSIP--GHEDPVSSVCFNRDGAYLASGSYDGIVRIWDS 261 Query: 335 DSGASVTTL 361 +G V TL Sbjct: 262 TTGTCVKTL 270
>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 85 kDa subunit) (p85) (TAFII-80) Length = 704 Score = 35.4 bits (80), Expect = 0.033 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDDLAVASPPA-GGHALGVVSLXXXXXXXXXXXVSIDSHI 319 H + + TGS D TVR W D++ S GH V SL S+D +I Sbjct: 543 HPNSNYVATGSSDRTVRLW--DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNI 600 Query: 320 RVFDVDSGASVTTL 361 ++D+ +G+ VTTL Sbjct: 601 IIWDLSNGSLVTTL 614
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 35.4 bits (80), Expect = 0.033 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1113 PGPAGEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172 Query: 109 R 107 + Sbjct: 1173 K 1173 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 +PG S+GD E+ PP G G I G PG G G ++G G G R Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1218 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/58 (37%), Positives = 23/58 (39%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG GD + PP G G G PGADG G GAV G PG D Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGD 1292 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 113 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 996 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1054 Query: 112 ------DRVLVSPVHRL 80 DR L PV L Sbjct: 1055 LRGFPGDRGLPGPVGAL 1071 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 158 +PG M +G + PP G+ G G+PG DGL GE+ Sbjct: 584 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643 Query: 157 RRGAVVSSGHPG 122 RG SG PG Sbjct: 644 HRGDPGPSGPPG 655
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 35.4 bits (80), Expect = 0.033 Identities = 24/59 (40%), Positives = 28/59 (47%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 DPG + G ER P G R G PG+DGL G + RG V SSG G + D Sbjct: 505 DPGTLGPPGPVGERGAP--GNR-----GFPGSDGLPGPKGAQGERGPVGSSGPKGSQGD 556 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G ER P G G I GLPG G+ G + +G+ SG PG Sbjct: 698 PGAVGPLGPRGERGNPGERGEPG-ITGLPGEKGMAGGHGPDGPKGSPGPSGTPG 750 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG +G PP GG+ G+ G+PG G V G RG G PG Sbjct: 668 PGPTGFQGHPGPPGPPGEGGKPGD-QGVPGGPGAVGPLGPRGERGNPGERGEPG 720 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/55 (40%), Positives = 24/55 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG M G PP + G DGE G G G V AG RG + G PG Sbjct: 244 DPGPMGPIGSRGPEGPPGKPGEDGE-PGRNGNPGEVGFAGSPGARGFPGAPGLPG 297 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG G+ VP RG G+DG++ G PG GL GE+ G GHPG Sbjct: 622 DPGKPGEAGNPG--VPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPG 678 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/54 (37%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG GD R P GR G+ GLPG G G+ RG GH G Sbjct: 1091 PGDAGQRGDPGSRGPIGHLGRAGKR-GLPGPQGPRGDKGDHGDRGDRGQKGHRG 1143 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIV--GLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 113 DPG G PP G G+ G PG DG AG +RG V G PG R Sbjct: 943 DPGSHGRVGVRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIV---GMPGQRG 999 Query: 112 DR 107 +R Sbjct: 1000 ER 1001
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 35.0 bits (79), Expect = 0.043 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G GE+ +G + G G + D Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1140 Query: 109 R 107 + Sbjct: 1141 K 1141 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + GLPGADG G+E + G + G PG Sbjct: 693 NPGSQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 749 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG G E PP G+ G PGA G R GE+ +G + G PG Sbjct: 1338 DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGRQGEKGAKGEAGAEGPPG 1388 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PG S+GD E PP G G VG PG G G ++G G G R Sbjct: 1131 EPGQKGSKGDKGENGPPGPPGLQGP-VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1189 Query: 106 VLVSPV 89 L P+ Sbjct: 1190 GLPGPI 1195 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG + P G+DG GLPGA G G E +G G Sbjct: 997 PGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGS 1056 Query: 127 PGGRPDRVLVSPV 89 PG R P+ Sbjct: 1057 PGERGSAGAAGPI 1069 Score = 28.5 bits (62), Expect = 4.1 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQR---RGAVVSSGH 128 PG +G PP G G+ G PG GL+ GE+ RG S G Sbjct: 1420 PGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGSQGS 1479 Query: 127 PGGRPDRVLVSPVHRLEP 74 PG + D + P + P Sbjct: 1480 PGAKGDGGIPGPAGPIGP 1497
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.0 bits (79), Expect = 0.043 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E P GRDG VGLPG G V GE+ +G + G G + D Sbjct: 1115 PGPAGEKGVPGEEGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174 Query: 109 R 107 + Sbjct: 1175 K 1175 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 +PG S+GD E+ PP G G G PG G G ++G G G R Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGP-TGQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG GD + PP G G G PGADG G GAV G PG Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 113 PG + +G E P G G G PG GL AG+E +G +G PG G P Sbjct: 998 PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1056 Query: 112 ------DRVLVSPVHRL 80 DR L PV L Sbjct: 1057 LRGFPGDRGLPGPVGAL 1073 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + G+PGADG G+E G G PG Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 158 +PG M +G + PP G+ G G+PG DGL GE+ Sbjct: 586 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 645 Query: 157 RRGAVVSSGHPG 122 RG SG PG Sbjct: 646 HRGDPGPSGPPG 657
>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein| Length = 678 Score = 35.0 bits (79), Expect = 0.043 Identities = 20/80 (25%), Positives = 37/80 (46%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 322 H ++L +GS+D+TV+ W +D + S GH V ++ S D +R Sbjct: 436 HFDASILASGSVDKTVKIWNFEDKSTFS--LRGHTDWVNAVRVDTSSRTVFSASDDCTVR 493 Query: 323 VFDVDSGASVTTLDAAPSEV 382 ++D+D+ + T +V Sbjct: 494 LWDLDTKTCIRTFHGHVGQV 513
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 35.0 bits (79), Expect = 0.043 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G GE+ +G + G G + D Sbjct: 850 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 909 Query: 109 R 107 + Sbjct: 910 K 910 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + GLPGADG G+E + G S G PG Sbjct: 462 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGSLGPPG 518 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG + P G+DG GLPGA G G E +G G Sbjct: 766 PGAAGKEGAKGDPGPQGVSGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 825 Query: 127 PGGRPDRVLVSPV 89 PG R P+ Sbjct: 826 PGERGSAGTAGPI 838
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 35.0 bits (79), Expect = 0.043 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = -2 Query: 283 PGGMRSE-GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P G+ E G +R PP G G+ + G PG DG+ G RG SGH G Sbjct: 84 PIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNG 143 Query: 121 GRPD 110 R D Sbjct: 144 SRGD 147 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG GD P G GE+ VG PG GL+ G+ R GHPG P Sbjct: 304 PGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNR------GHPG--PP 355 Query: 109 RVLVSP 92 VLV+P Sbjct: 356 GVLVTP 361 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +GD P G DG I G PG G + G G+ G PGGR Sbjct: 100 PGAAGDKGDKGPTGVPGFPGLDG-IPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGR 154 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 G M G P C+G + + G G DG+ G R+G G+PGG Sbjct: 1392 GAMGLPGMRGPPGPGCKG--EPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGG 1443
>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 34.7 bits (78), Expect = 0.057 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +2 Query: 83 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 262 S +G H D+I A A+ PAA+ +L TGS D+T+ W +L H V S Sbjct: 280 STEGQHRDAINAIAFNPAAE----TVLATGSADKTIGLWDLRNLKTKLHSLESHTDSVTS 335 Query: 263 L 265 + Sbjct: 336 I 336
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 34.7 bits (78), Expect = 0.057 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 G +G ER PP G+DG +G G G +GEE +G V + GH G + D+ Sbjct: 1034 GPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDK 1093 Score = 31.6 bits (70), Expect = 0.48 Identities = 24/66 (36%), Positives = 28/66 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG + G E PP + G G GLPG GL+ GE+ G G PG D Sbjct: 625 PGAKGNVGPPGEPGPPGQQGNHGS-QGLPGPQGLIGTPGEKGPPGNPGIPGLPGS--DGP 681 Query: 103 LVSPVH 86 L P H Sbjct: 682 LGHPGH 687 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 113 PG GD P G DGE G G G +AGE RG + G PG GRP Sbjct: 559 PGEKGQRGDFGHVGQPGPPGEDGER-GAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRP 616 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G E+ PP G I GLPG+DG + G E G + G PG Sbjct: 652 PGPQGLIGTPGEKGPPGNPG----IPGLPGSDGPLGHPGHEGPTGEKGAQGPPG 701 Score = 30.8 bits (68), Expect = 0.82 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG ++G R PP G+ G+ ++G PG GL GE+ G V S G Sbjct: 1111 PGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMG- 1169 Query: 127 PGGRP 113 P G P Sbjct: 1170 PHGAP 1174 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 241 PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PP G G+ GLPG G G+ G + S GHPG Sbjct: 1413 PPGEAGEKGD-QGLPGVQGPPGPKGDPGPPGPIGSLGHPG 1451 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/55 (36%), Positives = 22/55 (40%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 D G M G R P G +G GLPG G GE+ RG G PG Sbjct: 1164 DVGSMGPHGAPGPRGPQGPTGSEGT-PGLPGGVGQPGAVGEKGERGDAGDPGPPG 1217 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 110 PG GD PP G G G PG G G E R G + G PG G P Sbjct: 1282 PGEKGDPGDVGGPGPPGASGEPGA-PGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPG 1340 Query: 109 R 107 R Sbjct: 1341 R 1341 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSG 131 DPG +GD P G GE +GLPG G G ++G+ G Sbjct: 987 DPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERG 1046 Query: 130 HPGGRPDRVLVSPVHRLEP 74 PG + P+ L P Sbjct: 1047 PPGPTGKDGIPGPLGPLGP 1065
>SFTPA_RABIT (P12842) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 247 Score = 34.3 bits (77), Expect = 0.074 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP--- 113 PG +G + PP G G + GLPG DGL+ G RG G PG R Sbjct: 41 PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLIGAPGVPGERG---DKGEPGERGPPG 97 Query: 112 -----DRVLVSPVHRLEPRKLHRTLSSL 44 D L + +H L H L S+ Sbjct: 98 LPAYLDEELQATLHELR----HHALQSI 121
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 34.3 bits (77), Expect = 0.074 Identities = 22/54 (40%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P + GD+SE P C G GLPG GL + GEE G S G PG Sbjct: 999 PRAEEARGDNSEGDPGCVGSP-----GLPGPPGLPGQRGEEGPPGMRGSPGPPG 1047 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 241 PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 PP + G G G PG+ GL + G E R+G G PG + ++ Sbjct: 1476 PPGKDGAPGR-PGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEK 1519 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/54 (35%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG M G + P G G+ G PG G R G E GA+ G PG Sbjct: 1235 PGLMGPPGFKGKTGHPGLPGPKGDC-GKPGPPGSTGRPGAEGEPGAMGPQGRPG 1287
>PRP46_ASPFU (Q4WT34) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 46) Length = 453 Score = 34.3 bits (77), Expect = 0.074 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +2 Query: 77 FKSVDG-AHEDSIWAAAWVPAADHRPTAL-LLTGSIDETVRAWQPDDLA 217 F+S+D A S+ A A + +A T L L+TG D+T++ W+PDD A Sbjct: 387 FQSIDTMAQPGSLDAEAGIMSATFDRTGLRLITGEADKTIKVWKPDDEA 435
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4| Length = 376 Score = 34.3 bits (77), Expect = 0.074 Identities = 23/88 (26%), Positives = 37/88 (42%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 277 H SI +A + P + L T S D+TV+ W D + + GH LGV + Sbjct: 86 HTKSISSAKFSPCGKY-----LGTSSADKTVKIWNMDHM-ICERTLTGHKLGVNDIAWSS 139 Query: 278 XXXXXXXVSIDSHIRVFDVDSGASVTTL 361 S D +++F++ + TL Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTL 167 Score = 32.0 bits (71), Expect = 0.37 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +2 Query: 152 TALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 328 ++L+++GS DE+VR W + + + PA + VS S D +R++ Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG--SYDGLVRIW 240 Query: 329 DVDSGASVTTL 361 D +G + TL Sbjct: 241 DTANGQCIKTL 251
>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 436 Score = 33.9 bits (76), Expect = 0.096 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = +2 Query: 83 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 262 S +G H D+I A A+ PAA+ +L TGS D+++ W +L H V S Sbjct: 280 SAEGQHRDAINAIAFNPAAE----TVLATGSADKSIGLWDLRNLKTKLHTLECHTDSVTS 335 Query: 263 LX-XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA 370 L S D I +D+ T D A Sbjct: 336 LSWHPFEESVLASASYDRKIMFWDLSRSGEEQTPDDA 372
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 33.9 bits (76), Expect = 0.096 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG + G+ ER PP G G + G PGA G G R+G G PG D Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQG---EKGEPGRPGD 1541 Query: 109 RVLVSP 92 +V P Sbjct: 1542 PAVVGP 1547 Score = 31.6 bits (70), Expect = 0.48 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCR---GGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSG 131 D G +GD PP GRDGE+ G PG GL +AGE RGA G Sbjct: 1608 DSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRG 1667 Query: 130 HPGGRPDR 107 G + D+ Sbjct: 1668 PVGEKGDQ 1675 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -2 Query: 286 DPGGMRSEG-DHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 DPG G ER PP G GE G PG GL RA G V +G PG R + Sbjct: 2010 DPGPQGPPGLALGERGPPGPSGLAGE-PGKPGIPGLPGRA------GGVGEAGRPGERGE 2062 Query: 109 R 107 R Sbjct: 2063 R 2063 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P G++ G+ E PP RG G G + G PG GLV G G V +G PG Sbjct: 2202 PSGLK--GEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPG 2257 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 229 GGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 GG G++VG PGA G G +G +G PG Sbjct: 2316 GGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG 2351 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = -2 Query: 265 EGDHSERVPPCRGGRDGE-IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +G ER PP GE +VG PG G GE+ R G G G Sbjct: 2739 QGQKGERGPP------GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKG 2781 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 17/72 (23%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDG-----------------EIVGLPGADGLVDRAGEEQ 158 DPG G+ +R PP GR G G PG DGL GE+ Sbjct: 1759 DPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQG 1818 Query: 157 RRGAVVSSGHPG 122 G G PG Sbjct: 1819 LPGPSGPPGLPG 1830
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PGG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 199 EPGGSGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G E PP G G G PGADG G G + G PG R Sbjct: 351 GSEGPQGVRGEPGPPGPAGAAGP-AGNPGADGQPGAKGANGAPGIAGAPGFPGAR 404 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 8/65 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG R P G G G PGADG+ G RGA +G Sbjct: 449 PGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPSGERGAPGPAG- 507 Query: 127 PGGRP 113 P G P Sbjct: 508 PKGSP 512
>TUP11_SCHPO (Q09715) Transcriptional repressor tup11| Length = 614 Score = 33.1 bits (74), Expect = 0.16 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 13/111 (11%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-------------PDDLAVASPPAG 238 H++S+++ A+ P +++LL+GS+D+T++ W+ P+ + A+ Sbjct: 483 HKESVYSIAFSP-----DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT--YT 535 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 GH V+S+ S D ++ +D+ +G S T + V V Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
>WDS_DROME (Q9V3J8) Protein will die slowly| Length = 361 Score = 32.7 bits (73), Expect = 0.21 Identities = 28/105 (26%), Positives = 45/105 (42%) Frame = +2 Query: 77 FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 256 F+ H+ I AW ++D R LL++GS D+T++ W+ + GH+ V Sbjct: 106 FEKTISGHKLGISDVAW--SSDSR---LLVSGSDDKTLKVWEL-STGKSLKTLKGHSNYV 159 Query: 257 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 S D +R++DV +G + TL A V V Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 204 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/67 (23%), Positives = 29/67 (43%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L + S D+ ++ W D GH LG+ + S D ++V+++ + Sbjct: 87 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST 145 Query: 341 GASVTTL 361 G S+ TL Sbjct: 146 GKSLKTL 152
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 32.7 bits (73), Expect = 0.21 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G E+ P GRDG VGLPG G GE+ +G + G G + Sbjct: 1083 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK 1140 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G PP G G+ + GLPGADG G+E + G + G PG Sbjct: 695 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 751 Score = 32.0 bits (71), Expect = 0.37 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG G E PP G+ G PGA G R GE+ +G + G PG Sbjct: 1340 DPGQPGPPGPSGEAGPPGPPGKRGP----PGAAGAEGRQGEKGAKGEAGAEGPPG 1390 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG + P G+DG GLPGA G G E +G G Sbjct: 999 PGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1058 Query: 127 PGGRPDRVLVSPV 89 PG R P+ Sbjct: 1059 PGERGSAGTAGPI 1071 Score = 28.5 bits (62), Expect = 4.1 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQR---RGAVVSSGH 128 PG +G PP G G+ G PG GL+ GE+ RG + G Sbjct: 1422 PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGS 1481 Query: 127 PGGRPDRVLVSPVHRLEP 74 PG + D + P L P Sbjct: 1482 PGAKGDGGIPGPAGPLGP 1499 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 D G M G R P G DG G PG+ G V GE+ G + G PG Sbjct: 1214 DVGPMGPPGPPGPRGPQGPNGADGP-QGPPGSVGSVGGVGEKGEPGEAGNPGPPG 1267
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 32.7 bits (73), Expect = 0.21 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = +2 Query: 125 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPA--GGHALGVVSLXXXXXXXXXX 295 WV A P ALL +GS D TVR W D+A A A GH V+ + Sbjct: 503 WVRAVAFSPDGALLASGSDDATVRLW---DVAAAEERAVFEGHTHYVLDIAFSPDGSMVA 559 Query: 296 XVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 S D R+++V +G L V+ V Sbjct: 560 SGSRDGTARLWNVATGTEHAVLKGHTDYVYAV 591 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Frame = +2 Query: 125 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXX 295 WV A P ALL +GS D T+R W D+A GH V S+ Sbjct: 670 WVRAVAFSPDGALLASGSDDRTIRLW---DVAAQEEHTTLEGHTEPVHSVAFHPEGTTLA 726 Query: 296 XVSIDSHIRVFDV 334 S D IR++ + Sbjct: 727 SASEDGTIRIWPI 739
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PGG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 199 EPGGSGPMGPPGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G E PP G G G PGADG G G + G PG R Sbjct: 351 GSEGPQGVRGEPGPPGPAGAAGP-AGNPGADGQPGAKGANGAPGIAGAPGFPGAR 404
>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)| Length = 356 Score = 32.3 bits (72), Expect = 0.28 Identities = 21/54 (38%), Positives = 24/54 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P G EG + PP G G + GLPG +GL GE G SG PG Sbjct: 236 PEGDLKEGPPGDEGPPGPIGAPG-MPGLPGRNGLTGGQGERGWPGVSGESGEPG 288
>SFTPA_RAT (P08427) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 32.3 bits (72), Expect = 0.28 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G + PP G G + GLPG DGL G RG G PG R Sbjct: 42 PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGERG---DKGEPGER 94
>NPP17_CAEEL (Q93454) Nucleoporin-17 (Nuclear pore complex protein 17) (CeRAE1)| Length = 373 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 86 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 211 VDGA ED+I + P +P +L GS D T+R W +D Sbjct: 37 VDGAPEDTIQVIKFSPTPQDKP--MLACGSWDGTIRVWMFND 76 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 83 SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDL 214 +V G H+ + W+ +++ L+TGS D+T+R W +L Sbjct: 124 AVVGTHDGPVKTCHWINGNNYQ---CLMTGSFDKTLRFWDMKNL 164
>C1QT5_RAT (Q5FVH0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 32.3 bits (72), Expect = 0.28 Identities = 26/70 (37%), Positives = 30/70 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG + G H + P R GRDG G PGA G GE R G G PG R + Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPRGE-- 85 Query: 103 LVSPVHRLEP 74 PV + P Sbjct: 86 -AGPVGAIGP 94
>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2| Length = 924 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 D GG G +P GG G G PG G QR GA + G PGG P R Sbjct: 244 DAGGGNYRGGGVGALP---GGGSGGFRGRPGGGGHGGGGRPGQRGGAAGAFGRPGGAPRR 300
>SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 249 Score = 32.0 bits (71), Expect = 0.37 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGH--PGGRP- 113 PG +G + PP G G + G PG DG++ G RG G P G P Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMAGPPGQDGMIGAPGLPGERGEKGEPGERGPPGLPA 101 Query: 112 --DRVLVSPVHRLEPRKLHRTLSSL 44 D L S +H + H+ L S+ Sbjct: 102 HLDEELQSALHEIR----HQILQSM 122
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G AGE+ +G V G G + + Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100 Query: 109 R 107 + Sbjct: 1101 K 1101 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG+ + G E+ P G G + G PG G GE+ G +G PG Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-VQGEPGVKGPRGERGEKGESGQAGEAGPPG 1252 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/53 (37%), Positives = 23/53 (43%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G S G E PP + G G GLPG G + GE+ RG G PG Sbjct: 634 GPKGSLGPQGEPGPPGQQGTPGA-QGLPGPQGAIGPHGEKGARGKPGLPGMPG 685 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 8/64 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG + PP G+DG GLPG G G E G +G Sbjct: 957 PGTSGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGS 1016 Query: 127 PGGR 116 PG R Sbjct: 1017 PGER 1020 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G H E+ + G + G+PG+DGL G+E G + G G Sbjct: 660 PGPQGAIGPHGEKGARGKPG----LPGMPGSDGLPGHPGKEGPPGTKGNQGPSG 709 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 PG +G+ + P G G + G PG G RAG + RG G PG + DR Sbjct: 504 PGSPGLKGESGDLGPQGPRGPQG-LTGPPGKAGRRGRAGADGARG---MPGEPGMKGDR 558
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G E+ P GRDG VGLPG G AGE+ +G V G G + + Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100 Query: 109 R 107 + Sbjct: 1101 K 1101 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PGG+ + G E+ P G G I G PG G GE+ G G PG + Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-IQGEPGVKGPRGERGEKGESGQPGEPGPPGAK 1254 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 8/64 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 128 PG EG + PP G+DG GLPG G G E G +G Sbjct: 957 PGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGS 1016 Query: 127 PGGR 116 PG R Sbjct: 1017 PGER 1020 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G H E+ P + G + G+PG+DG G+E G + G G Sbjct: 660 PGPQGAIGPHGEKGPQGKPG----LPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G S G E PP + G G GLPG G + GE+ +G G PG Sbjct: 634 GPKGSLGPQGEPGPPGQQGTPGT-QGLPGPQGAIGPHGEKGPQGKPGLPGMPG 685 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGL---VDRAGEEQRRGAVVSSGHPG 122 GG ++GD P + G G G PG DGL G++ R GA +G PG Sbjct: 1333 GGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPG 1390 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + +G E P G G G PG GL AG+E +G G PG Sbjct: 924 PGVVGPQGAAGETGPMGERGHPGP-PGPPGEQGLPGTAGKEGTKGDPGPPGAPG 976
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 PG +GD ER P G G++ G PGADG+ G+ RG G G Sbjct: 81 PGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140 Query: 118 RPD 110 R D Sbjct: 141 RGD 143
>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP 229 HE ++ AW P +D LL +GS D T R W + + + P Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGP 206
>C1QT5_MOUSE (Q8K479) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/56 (41%), Positives = 25/56 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG + G H + P R GRDG G PGA G GE R G G PG R Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPR 83
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 31.6 bits (70), Expect = 0.48 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 13/77 (16%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG +G+ PP G DG+ + G PGADGL G G G Sbjct: 284 PGIDGIDGERGPNGPPGPPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGE 343 Query: 127 PG-----GRPDRVLVSP 92 PG G P + L+ P Sbjct: 344 PGPPGARGLPGKGLLGP 360 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 10/66 (15%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE----------IVGLPGADGLVDRAGEEQRRGAVVSS 134 PG +G E PP G G+ GLPG G G+ +RG Sbjct: 332 PGATGPKGQKGEPGPPGARGLPGKGLLGPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGPP 391 Query: 133 GHPGGR 116 G PG R Sbjct: 392 GPPGPR 397
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG G PP G+ G+ G PG +GL G++ G ++G PG Sbjct: 333 PGGPGDRGRQGNFGPPGSTGQKGDR-GEPGLNGLPGNPGQKGEPGRAGATGEPG 385 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G M +GD + CR G G+ + G+PG DG GE RG GH G Sbjct: 558 GDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE---RGYPGERGHDG 612 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -2 Query: 241 PPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPV 89 PP G GE +G PGADG V G+ G SG PG ++ V P+ Sbjct: 858 PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPI 916 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 205 GLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 G+PG DG+ R G + G+ G PG + DR Sbjct: 926 GVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDR 958
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G + G+ E PP G I G PGADG GE+ G +G PG Sbjct: 747 GARGAPGERGETGPPGTSG----IAGPPGADGQPGAKGEQGEAGQKGDAGAPG 795 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 +PGG+ G ER P G R G PG DGL G RG +G G D Sbjct: 427 EPGGVGPIGPPGERGAP--GNR-----GFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 590 PGPSGFQGLPGPPGPPGEGGKPGD-QGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 644 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 14/69 (20%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPC------------RGGRDGE--IVGLPGADGLVDRAGEEQRRG 149 +PG + G +R PP GR+G G PG DG G+ G Sbjct: 934 EPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETG 993 Query: 148 AVVSSGHPG 122 AV + G PG Sbjct: 994 AVGAPGAPG 1002
>SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 92 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G + PP G G + GLPG DG+ G RG G PG R Sbjct: 18 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 70
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 31.6 bits (70), Expect = 0.48 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 142 VSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP 29 + G PGGRP R + V +L L R +++LS T P Sbjct: 653 LGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNP 690
>C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-related protein 7| precursor Length = 289 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG S G H P R GRDG GL G G + AGE+ +G G Sbjct: 46 PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGP 105 Query: 127 PGGRPDRVLVSPV 89 G ++ V P+ Sbjct: 106 IGPEGEKGEVGPI 118 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = -2 Query: 241 PPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PP G G +GLPG DG R GE+ +G G G Sbjct: 45 PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTG 86
>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)| Length = 821 Score = 31.6 bits (70), Expect = 0.48 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 11/93 (11%) Frame = +2 Query: 8 SSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPA-----ADHRPTALLLTG 172 S ++K F +++ T ++V HE+ + A W P+ H+P LL + Sbjct: 251 SIRLKENTFTIKDGGVSTTVAVILETVLAGHENWVNAIHWQPSFYKDGVLHQPVRLL-SA 309 Query: 173 SIDETVRAWQPDDLA------VASPPAGGHALG 253 S+D+T+ W PD+ + V GG+ LG Sbjct: 310 SMDKTMILWAPDEESGVWLEQVRVGEVGGNTLG 342
>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G + PP G G + GLPG DG+ G RG G PG R Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 94
>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 2000 Score = 31.6 bits (70), Expect = 0.48 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 142 VSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP 29 + G PGGRP R + V +L L R +++LS T P Sbjct: 657 LGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNP 694
>PEX7_HUMAN (O00628) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 323 Score = 31.6 bits (70), Expect = 0.48 Identities = 24/108 (22%), Positives = 44/108 (40%) Frame = +2 Query: 59 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG 238 T K AG V H +++ W + R L+++GS D+TV+ W P G Sbjct: 97 TAKAAGPLQVYKEHAQEVYSVDW---SQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRG 153 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEV 382 ++ ++ S D +R++DV + + A +E+ Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEI 201 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +2 Query: 62 MKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 +K AG + V AH+ I + W ++ LL+TG++D ++R W Sbjct: 185 VKAAGVRIVIPAHQAEILSCDWCKYNEN----LLVTGAVDCSLRGW 226
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG-----G 119 PGG + G ER G GEI GLPG GL G E G G PG G Sbjct: 749 PGGPGTPGFPGERG---NSGEHGEI-GLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804 Query: 118 RPDRVLVSP 92 P R + P Sbjct: 805 PPGRCIEGP 813 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Frame = -2 Query: 262 GDHSERVPPCRGGRDGEIV-------GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 GD + PP G G + GLPG +GL G++ RRG G PG Sbjct: 792 GDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGL---KGQQGRRGKTGPKGDPG 842 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 262 GDHSERVPPCRGGRDG-----EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 GD R P R G DG + GLPG G + +GE+ +G G PG Sbjct: 554 GDPGLRGQPGRKGLDGIPGTLGVKGLPGPKGELALSGEKGDQGPPGDPGSPG 605
>C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/56 (41%), Positives = 25/56 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG + G H + P R GRDG G PGA G GE R G G PG R Sbjct: 32 PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGDPGPR 83
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 + G + G + ER PP G G+ PG G R G G G PGG+ DR Sbjct: 978 ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 GG G+H P G G+ G PGA G GE+ G ++G PGG Sbjct: 794 GGPGERGEHGPPGPAGFPGAPGQN-GEPGAKGERGAPGEKGEGGPPGAAGPPGG 846 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/54 (37%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G PP G+DG G PG G G RG+ S GHPG Sbjct: 1132 PGPAGPRGPVGPHGPP---GKDGSS-GHPGPIGPPGPRGNRGERGSEGSPGHPG 1181 Score = 27.7 bits (60), Expect(2) = 0.52 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGL 182 P G R +G + PP GR+G+ GLPG GL Sbjct: 100 PDGNRPQGPKGDPGPPGIPGRNGD-PGLPGQPGL 132 Score = 22.3 bits (46), Expect(2) = 0.52 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -2 Query: 205 GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G+ G G AG G SSGHPG Sbjct: 164 GVGGMGGYPGPAGPPGPPGPPGSSGHPG 191
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 265 H + + +W P + ++ TGS+D T+R W P GH+ + SL Sbjct: 185 HYNWVLCVSWSPDGE-----VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSL 235
>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20| Length = 606 Score = 31.2 bits (69), Expect = 0.63 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 7/94 (7%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG-------GHALGV 256 H+ +IW+ + H ++ +GS+D TVR W DL PAG GH V Sbjct: 409 HKQAIWSVRF-----HHLGEVVASGSLDHTVRLW---DL-----PAGKCRMALRGHVDSV 455 Query: 257 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTT 358 L S D + V+D +G T Sbjct: 456 NDLAWQPFSSSLATASSDKTVSVWDARAGLCTQT 489
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 31.2 bits (69), Expect = 0.63 Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 PG +G+ PP R G G G PG G G G V SG PG R D Sbjct: 919 PGEAGRDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGD 978 Query: 109 RVLVSPV 89 V PV Sbjct: 979 PGPVGPV 985 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG +G PP + G DG G PG G AG + RG + G PG Sbjct: 121 EPGQTGPQGPRGPPGPPGKAGEDGH-PGKPGRPGERGVAGPQGARGFPGTPGPPG 174 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG--- 122 + G S G+ PP G GE GLPGADG G RGA G G Sbjct: 375 EEGKRGSNGEPGSAGPPGPAGLRGEPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPNG 434 Query: 121 --GRP 113 GRP Sbjct: 435 DAGRP 439
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 31.2 bits (69), Expect = 0.63 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Frame = +2 Query: 155 ALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIR 322 ++L TGS D+TVR W ++S GH V S+ S D +R Sbjct: 1003 SMLATGSGDQTVRLWD-----ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057 Query: 323 VFDVDSGASVTTLDAAPSEVWGV 391 ++D+ SG + TL S V V Sbjct: 1058 LWDISSGNCLYTLQGHTSCVRSV 1080 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = +2 Query: 125 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 301 WV + P ++L +GS D+TVR W+ + GH V S+ Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASG 1344 Query: 302 SIDSHIRVFDVDSGASVTT 358 S D +R++ + SG + T Sbjct: 1345 SDDQTVRLWSISSGECLYT 1363 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Frame = +2 Query: 125 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 301 WV + P A+L +GS D+TVR W GH V S+ Sbjct: 1370 WVGSVIFSPDGAILASGSGDQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASG 1428 Query: 302 SIDSHIRVFDVDSGASVTTL 361 S D +R++++ SG + TL Sbjct: 1429 SDDQTVRLWNISSGECLYTL 1448 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = +2 Query: 155 ALLLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 328 A+L +GS D+TVR W D++ + GH V S+ D +R++ Sbjct: 1045 AMLASGSDDQTVRLW---DISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101 Query: 329 DVDSGASVTTLDAAPSEV 382 D+ SG + TL S V Sbjct: 1102 DISSGNCLYTLQGYTSWV 1119 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = +2 Query: 122 AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 298 +WV + P + L +GS D+TVR W+ + + GH V S+ Sbjct: 1201 SWVNSVVFNPDGSTLASGSSDQTVRLWEINS-SKCLCTFQGHTSWVNSVVFNPDGSMLAS 1259 Query: 299 VSIDSHIRVFDVDSGASVTT 358 S D +R++D+ S + T Sbjct: 1260 GSSDKTVRLWDISSSKCLHT 1279 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +2 Query: 125 WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 301 WV A P A L +GS D+TVR W + GH V S+ Sbjct: 1160 WVNAVAFSPDGATLASGSGDQTVRLWDISS-SKCLYILQGHTSWVNSVVFNPDGSTLASG 1218 Query: 302 SIDSHIRVFDVDSGASVTTLDAAPSEV 382 S D +R+++++S + T S V Sbjct: 1219 SSDQTVRLWEINSSKCLCTFQGHTSWV 1245 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 +L +GS D+TVR W GH V S+ S D +R++D+ Sbjct: 920 MLASGSDDQTVRLWDISS-GQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDIS 978 Query: 338 SG 343 SG Sbjct: 979 SG 980
>LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dlis1) (DLis-1)| Length = 411 Score = 31.2 bits (69), Expect = 0.63 Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 15/105 (14%) Frame = +2 Query: 98 HEDSIWAAAWVPAA---------------DHRPTALLLTGSIDETVRAWQPDDLAVASPP 232 HE ++ AW P A H L +GS D+T+R W + + Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLT 334 Query: 233 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDA 367 GH V L S D IRV+D+ + + TL A Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYA 379
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 211 HE ++ AW P+ D LL +GS D T R W D Sbjct: 354 HESEVFICAWNPSRD-----LLASGSGDSTARIWDMSD 386
>DOA1_YEAST (P36037) Protein DOA1| Length = 715 Score = 31.2 bits (69), Expect = 0.63 Identities = 27/97 (27%), Positives = 43/97 (44%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 274 AH S+W A V ++++ LT S D+T++ WQ D V +G H VV Sbjct: 135 AHNASVWDAKVVSFSENK----FLTASADKTIKLWQND--KVIKTFSGIHN-DVVRHLAV 187 Query: 275 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVW 385 S D I++ D+ +G + T + S V+ Sbjct: 188 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 224
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 210 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 268 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVL 101 G S G + PP G+DG G PG G +AG G ++G PG +R + Sbjct: 542 GSPGSPGPDGKTGPPGPAGQDGR-PGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV 600 Query: 100 VSPVHRLEP 74 P + P Sbjct: 601 PGPPGAVGP 609 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G E PP G G G PGADG G G + G PG R Sbjct: 362 GSEGPQGVRGEPGPPGPAGAAGP-AGNPGADGQPGAKGANGAPGIAGAPGFPGAR 415
>CDC4_CANAL (P53699) Cell division control protein 4| Length = 684 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 ++++GS D TVR W D + GH V S S+DS+I V++ + Sbjct: 492 IIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFE 551 Query: 338 SG 343 +G Sbjct: 552 TG 553
>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1| Length = 446 Score = 31.2 bits (69), Expect = 0.63 Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 8/103 (7%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD---LAVASPPAGGHALGVVSLX 268 H +A W P R T LLTG + + W P D V P GH V L Sbjct: 213 HMGEGFALDWSP----RVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQ 268 Query: 269 -XXXXXXXXXXVSIDSHIRVFDVDSGAS----VTTLDAAPSEV 382 S D+ IR++D+ + S +TT A +V Sbjct: 269 WSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDV 311
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 31.2 bits (69), Expect = 0.63 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = -2 Query: 238 PCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P G DG++ VGLPGA G AG G SSGH G Sbjct: 1108 PGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQG 1151 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/54 (38%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG S+GD P G G+ GLPG DG+ G GAV +G PG Sbjct: 151 PGQKGSKGD-PVLAPGSFKGMKGD-PGLPGLDGITGPQGAPGFPGAVGPAGPPG 202
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 206 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 264 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVL 101 G S G + PP G+DG G PG G +AG G ++G PG +R + Sbjct: 538 GSPGSPGPDGKTGPPGPAGQDGR-PGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV 596 Query: 100 VSPVHRLEP 74 P + P Sbjct: 597 PGPPGAVGP 605 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G E PP G G G PGADG G G + G PG R Sbjct: 358 GSEGPQGVRGEPGPPGPAGAAGP-AGNPGADGQPGAKGANGAPGIAGAPGFPGAR 411
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PG G PP + G DGE G PG G G + RG ++G PG + R Sbjct: 48 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 106
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 30.8 bits (68), Expect = 0.82 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRG--GRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSS 134 PGG+ S G P RG G+DG +G+PGA G+ G +GA+ Sbjct: 1539 PGGVGSPGRDGS--PGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPP 1596 Query: 133 GHPGGRPDR 107 G PG + +R Sbjct: 1597 GVPGAKGER 1605
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 30.8 bits (68), Expect = 0.82 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 18/78 (23%) Frame = -2 Query: 286 DPGGMRS-----EGDHSERVPPCRGGR--DGEIVGLPG----ADGLVDRAGEEQR----- 155 DP RS +G+ +E++ R G DGEIVGLPG G D+ G R Sbjct: 10 DPEKARSYQVEVKGEDAEKLIGKRIGDVIDGEIVGLPGYKLKITGGTDKDGFPMRPDIHG 69 Query: 154 --RGAVVSSGHPGGRPDR 107 R ++ SG PG RP+R Sbjct: 70 PVRVRLLLSGPPGFRPER 87
>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 925 Score = 30.8 bits (68), Expect = 0.82 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = +2 Query: 92 GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALG 253 G H D + + P D LL TGS D TV+ W+ A P A G LG Sbjct: 74 GCHSDLVTDLDFSPFDDF----LLATGSADRTVKLWRLPGPGQALPSAPGVVLG 123
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.8 bits (68), Expect = 0.82 Identities = 21/55 (38%), Positives = 26/55 (47%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 PG + G+ ER P G G+ G PG G RAG +G + SG PGG Sbjct: 355 PGPAGASGNPGERGEP---GPQGQ-AGPPGPQGPPGRAGSPGGKGEMGPSGIPGG 405 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 GG G + PP G G GLPG G+ G G G PGG+ Sbjct: 695 GGPGPAGSEGAKGPPGPPGAPGG-TGLPGLQGMPGERGASGSPGPKGDKGEPGGK 748 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = -2 Query: 280 GGMRSEGDHSERVP------PCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G + G + ER P P G++G+ VGLPG G AG+ RG SG PG Sbjct: 584 GNEGAPGKNGERGPGGPPGTPGPAGKNGD-VGLPGPPGPAGPAGD---RGEPGPSGSPG 638
>C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7| precursor Length = 289 Score = 30.8 bits (68), Expect = 0.82 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG S G H P R GRDG GL G G + AGE+ +G G Sbjct: 46 PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLKGKTGPLGLAGEKGDQGETGKKGP 105 Query: 127 PGGRPDRVLVSP 92 G ++ V P Sbjct: 106 IGPEGEKGEVGP 117 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = -2 Query: 241 PPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PP G G +GLPG DG R GE+ +G G G Sbjct: 45 PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLKGKTG 86
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.8 bits (68), Expect = 0.82 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG S G R P GR GE GLPG+ G V AG+E G G PG Sbjct: 426 PGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPG 484 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/64 (31%), Positives = 25/64 (39%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG + GD E G G G PG G V AG G S+G PG + ++ Sbjct: 690 PGPAGASGDRGEAGAAGPSGPAGPR-GSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKG 748 Query: 103 LVSP 92 P Sbjct: 749 TKGP 752 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG ++G PP G +G+ G PG G AG RG+ S G PG Sbjct: 368 EPGSAGAQG------PPGPSGEEGKR-GSPGEPGSAGPAGPPGLRGSPGSRGLPG 415
>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)| Length = 783 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +2 Query: 74 GFKSVDGAHEDSIWAAAWVPAADHR-PTALLLTGSIDETVRAWQPDDL 214 G K VDG + W A VP AD + P L L +++ +R+++PD+L Sbjct: 289 GPKQVDGKPVEGTWRAHQVPIADFKNPEHLTL---LEDWMRSYRPDEL 333
>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2| Length = 561 Score = 30.8 bits (68), Expect = 0.82 Identities = 22/60 (36%), Positives = 29/60 (48%) Frame = -2 Query: 217 GEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQ 38 GEI+ L G +G AG+ GA+V P G RV + HR PR L R + + Q Sbjct: 340 GEIIALMGRNG----AGKSTLLGALVGLVPPAGGSVRVGGAVPHRTAPRDLVRRVGLVPQ 395
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 30.8 bits (68), Expect = 0.82 Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRR---GAVVSSGHPG-- 122 +PGG G ER P G R G PG DG+ G R GAV G PG Sbjct: 311 EPGGAGPAGPPGERGAP--GSR-----GFPGQDGIAGPKGPPGERGSPGAVGPKGSPGEA 363 Query: 121 GRP 113 GRP Sbjct: 364 GRP 366 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 474 PGPSGFQGLPGPPGPPGEGGKPGD-QGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 528
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 30.8 bits (68), Expect = 0.82 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G S GD R G+DGE GLPG GL GE G+ G PG Sbjct: 571 GSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPA 630 Query: 115 PDR 107 +R Sbjct: 631 GER 633 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G R GRDG+ GLPG G+ AG G + S+G PG Sbjct: 123 PGPAGPSGPIGPRGQTGERGRDGKS-GLPGLRGVDGLAGPPGPPGPIGSTGSPG 175 Score = 27.7 bits (60), Expect = 6.9 Identities = 24/82 (29%), Positives = 31/82 (37%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG S+GD + G G VGL G G+ G G ++G PG + Sbjct: 177 PGTPGSKGDRGQSGIKGAQGLQGP-VGLSGQPGVAGENGHPGMPGMDGANGEPGASGESG 235 Query: 103 LVSPVHRLEPRKLHRTLSSLSQ 38 L P PR + T S Q Sbjct: 236 LPGPSGFPGPRGMPGTAGSPGQ 257
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 30.8 bits (68), Expect = 0.82 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 113 PG G PP G G G PGA G G++ GA ++GHPG G+P Sbjct: 126 PGPPGPPGPTGPEGPPGPNGAPGH-PGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQP 183
>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A| (Transducin beta-like 1X-related protein 1-A) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-A) (TBL1-related protein 1-A) (xTBLR1) Length = 519 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +2 Query: 53 EGTMKLAGFKSVD-GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 +G +++ K+V HE ++ AW P +D LL +GS D T R W Sbjct: 157 DGDVEIPSSKAVVLRGHESEVFICAWNPVSD-----LLASGSGDSTARIW 201
>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 334 L + D+ ++ W DLA + GH + SL S+D+ +RV+D+ Sbjct: 483 LASAGEDQRLKLW---DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539 Query: 335 DSGASVTTLDAAPSEVWGV 391 S T D + E+ GV Sbjct: 540 RSTCCNTPADGSSGELVGV 558
>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 5) (Complexed with cdc5 protein 1) Length = 473 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP---DDLAVASPPAGGHALGVVSLX 268 H ++A P D +L+T D R W ++ V S GH V SL Sbjct: 246 HLSGVYALKLHPTLD-----VLVTAGRDAVARVWDMRTRQNVHVLS----GHKSTVASLA 296 Query: 269 XXXXXXXXXXVSIDSHIRVFDVDSGASVTTL 361 S+DS IR++D+ +G ++TTL Sbjct: 297 VQEFDPQVVTGSMDSTIRLWDLAAGKTLTTL 327
>SWD3_YEAST (P38123) COMPASS component SWD3 (Complex proteins associated with| SET1 protein SWD3) (Set1C component SWD3) Length = 315 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXX-XXXXXXXXXVSIDSHI 319 +R LL T S+DE+++ W + ++ H+ VVS+ S D I Sbjct: 105 NRKGNLLFTSSMDESIKIWDTLNGSLMK-TISAHSEAVVSVDVPMNDSSILSSGSYDGLI 163 Query: 320 RVFDVDSGASVTTL 361 R+FD ++G + TL Sbjct: 164 RIFDAETGHCLKTL 177
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 PG +GD ER P G G++ G PGADG+ G+ RG G G Sbjct: 81 PGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140 Query: 118 RPD 110 + D Sbjct: 141 QGD 143
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG + GD E P G G G PG G V AG G ++G PG + +R Sbjct: 684 PGPAGATGDRGEAGPAGPAGPAGPR-GTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 742 Query: 103 LVSP 92 P Sbjct: 743 TKGP 746 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G R P GR GE G PGA G V AG+E G G PG Sbjct: 420 PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPG 478
>PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 389 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/90 (25%), Positives = 40/90 (44%) Frame = +2 Query: 80 KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVV 259 +++ GAH+ I A A D +TGS D T++ W ++ ++ + GH LG+ Sbjct: 78 RTLAGAHQGWIRAIA----LDEITNKWYVTGSADSTIKIWDFENNSLKA-VLTGHVLGIR 132 Query: 260 SLXXXXXXXXXXXVSIDSHIRVFDVDSGAS 349 SL D +R +D++ S Sbjct: 133 SLCISKRHPYLFSGGEDKSLRCWDLERSNS 162
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 PG +G PP G+ GE VG PGA G +G RG ++G PG Sbjct: 634 PGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGA 693 Query: 118 R 116 R Sbjct: 694 R 694 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 + G + G + ER PP G G+ PG G R G G G PGG+ DR Sbjct: 978 ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG G ER PP G+PGA G G E +G G PG Sbjct: 670 PGGKGDSGAPGERGPP-------GTAGIPGARGGAGPPGPEGGKGPAGPPGPPG 716 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G PP + G G PG G G RG+ S GHPG Sbjct: 1132 PGPAGPRGPVGPHGPPGKDGTSGH----PGPIGPPGPRGNRGERGSEGSPGHPG 1181 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 6/61 (9%) Frame = -2 Query: 286 DPGGMRSEGDH-SERVPPCRG--GRDGEIVGLPGADGLVDRAGEEQR---RGAVVSSGHP 125 +PG G+ S +P +G G+DG G PGA+GL AGE RG +G P Sbjct: 441 EPGARGERGEAGSPGIPGPKGEDGKDGS-PGEPGANGLPGAAGERGPSGFRGPAGPNGIP 499 Query: 124 G 122 G Sbjct: 500 G 500
>NODB_RHILP (P24150) Chitooligosaccharide deacetylase (EC 3.5.1.-) (Nodulation| protein B) Length = 229 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = -2 Query: 199 PGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSLSQTKP*VF 20 PGAD +V+ + R GA+V H G PD + H L H+T+ +LS P + Sbjct: 153 PGADAIVNDVLQSVRPGAIVLL-HDGCPPDEMQQGADHSLR----HQTIMALSSIIPALH 207 Query: 19 D 17 D Sbjct: 208 D 208
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG + GD E P G G G PG G V AG G ++G PG + +R Sbjct: 682 PGPAGANGDRGEAGPAGPAGPAGPR-GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 740 Query: 103 LVSP 92 P Sbjct: 741 TKGP 744
>CI112_MOUSE (Q9CYU6) WD repeat-containing protein C9orf112 homolog| Length = 477 Score = 30.4 bits (67), Expect = 1.1 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 1/94 (1%) Frame = +2 Query: 53 EGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP 232 EGT +L S H + AW+ A ++ T L+ +G D +R W L Sbjct: 179 EGTAELQLVASWPAHHFE-----AWIAAFNYWQTELVYSGGDDCLLRGWDTRMLGTPVFT 233 Query: 233 AGGHALGVVSLXXXXXXXXXXXV-SIDSHIRVFD 331 + H +GV S+ S D H+ ++D Sbjct: 234 SKRHCMGVCSIQSSPHQEHILATGSYDEHVLLWD 267
>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| (WD-repeat protein BIG-3) Length = 334 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/67 (25%), Positives = 28/67 (41%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L + S D+ ++ W D GH LG+ + S D ++++DV S Sbjct: 60 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118 Query: 341 GASVTTL 361 G + TL Sbjct: 119 GKCLKTL 125 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 158 LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 334 L+++GS DE+VR W + + PA H+ V ++ S D R++D Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200 Query: 335 DSGASVTTL 361 SG + TL Sbjct: 201 ASGQCLKTL 209
>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)| Length = 334 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/67 (25%), Positives = 28/67 (41%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L + S D+ ++ W D GH LG+ + S D ++++DV S Sbjct: 60 LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118 Query: 341 GASVTTL 361 G + TL Sbjct: 119 GKCLKTL 125 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 158 LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 334 L+++GS DE+VR W + + PA H+ V ++ S D R++D Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200 Query: 335 DSGASVTTL 361 SG + TL Sbjct: 201 ASGQCLKTL 209
>SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G + PP G G + GLPG DGL G G G PG R Sbjct: 42 PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGEHG---DKGEPGER 94
>RAE1L_ARATH (Q38942) Rae1-like protein At1g80670| Length = 349 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE I A AW+P + LL TGS D+T++ W Sbjct: 113 HEGPIAAMAWIPGMN-----LLATGSWDKTLKYW 141
>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)| (NY-REN-62 antigen) Length = 1674 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASP--PAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 331 LL TGS D T + W +L GGH VVS+ VS S+I+V+D Sbjct: 1359 LLFTGSKDRTCKVW---NLVTGQEIMSLGGHPNNVVSVKYCNYTSLVFTVS-TSYIKVWD 1414 Query: 332 V-DSGASVTTLDAA 370 + DS + TL ++ Sbjct: 1415 IRDSAKCIRTLTSS 1428
>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10) Length = 629 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/77 (28%), Positives = 35/77 (45%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 +++G+ D V+ W P+ GH V SL S+D+ IRV+DV++ Sbjct: 436 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 492 Query: 341 GASVTTLDAAPSEVWGV 391 G + TL S G+ Sbjct: 493 GNCIHTLTGHQSLTSGM 509
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE ++ AW P +D LL +GS D T R W Sbjct: 181 HESEVFICAWNPVSD-----LLASGSGDSTARIW 209
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE ++ AW P +D LL +GS D T R W Sbjct: 178 HESEVFICAWNPVSD-----LLASGSGDSTARIW 206
>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B| (Transducin beta-like 1X-related homolog 1-B) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B) (TBL1-related protein 1-B) Length = 522 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE ++ AW P +D LL +GS D T R W Sbjct: 176 HESEVFICAWNPVSD-----LLASGSGDSTARIW 204
>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBX30) (hCdc4) (Archipelago homolog) (hAgo) (SEL-10) Length = 707 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/77 (28%), Positives = 35/77 (45%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 +++G+ D V+ W P+ GH V SL S+D+ IRV+DV++ Sbjct: 514 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 570 Query: 341 GASVTTLDAAPSEVWGV 391 G + TL S G+ Sbjct: 571 GNCIHTLTGHQSLTSGM 587
>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124| Length = 1683 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 4/108 (3%) Frame = +2 Query: 50 REGTMKLAGFKSVD----GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLA 217 R+ T+KL ++ H ++A ++P ++ ++ + S+D T+R WQ ++ Sbjct: 1301 RDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSN-----IIASASLDNTIRLWQRPLIS 1355 Query: 218 VASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTL 361 AG GV ++ D +I+++ G+ + TL Sbjct: 1356 PLEVLAGNS--GVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTL 1401 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 274 AH D +++ + P ++L + S D+TV+ W+ D + GH+ V S Sbjct: 1528 AHNDLVYSVNFNPDG-----SMLASTSADKTVKLWRSHDGHLLH-TFSGHSNVVYSSSFS 1581 Query: 275 XXXXXXXXVSIDSHIRVFDVDSGASVTTL 361 S D ++++ +D G +TTL Sbjct: 1582 PDGRYIASASEDKTVKIWQID-GHLLTTL 1609
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--GLPGADGLVDRAGEEQRRGAVVSSGHPG--GR 116 PG G+ P + GR G G PG +G AGE+ +G V GHPG GR Sbjct: 191 PGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDGNQGPV---GHPGVPGR 247 Query: 115 P 113 P Sbjct: 248 P 248
>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE ++ AW P +D LL +GS D T R W Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIW 196
>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12| Length = 586 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 11/109 (10%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPA-----------GGH 244 HE+S+++ A+ P + L++GS+D T++ W+ ++ +P GH Sbjct: 457 HEESVYSVAFSPDGKY-----LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH 511 Query: 245 ALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 ++S+ S D I+ + DS S TL + V V Sbjct: 512 KDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISV 560
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE ++ AW P +D LL +GS D T R W Sbjct: 180 HESEVFICAWNPVSD-----LLASGSGDSTARIW 208
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 2/73 (2%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 110 PG +G + P GG G PG G AG + GA + G PG G+ Sbjct: 145 PGNPGPQGPNGNPGAPAHGGGQGP----PGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRS 200 Query: 109 RVLVSPVHRLEPR 71 R L P R P+ Sbjct: 201 RGLPGPSGRPGPQ 213
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP-PAGGHAL 250 AH+ I+A +W P + H LL+ S D+T + W + +V S P G + L Sbjct: 231 AHDGGIYAISWSPDSTH-----LLSASGDKTSKIWDVNVNSVVSTFPMGSNVL 278
>TIP1_YEAST (P27654) Temperature shock-inducible protein 1 precursor (EC| 3.1.1.-) Length = 210 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -3 Query: 219 TARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAA---QIESS*APSTDLNPASFIVPS 52 T R S A ++S+ P S A AA + AA + SS APS+ P+S PS Sbjct: 97 TTRLSSEIAAALASVSPASSEAASSSEAASSSKAASSSEATSSAAPSSSAAPSSSAAPS 155
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE-----------IVGLPGADGLVDRAGEEQRRGAVV 140 D G GD + P R GR G I G PGA G G + G Sbjct: 359 DAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPG 418 Query: 139 SSGHPGGRPD 110 G PG R D Sbjct: 419 PKGEPGRRGD 428 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = -2 Query: 241 PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 P C+G R G G DG AG++ RG G P GRP R Sbjct: 342 PGCKGDR-----GDKGPDGYPGDAGDQGERGDEGMKGDP-GRPGR 380
>DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently-linked cell| wall protein 13) Length = 298 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/67 (35%), Positives = 32/67 (47%) Frame = -3 Query: 252 PSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTDLNP 73 P++ A +T+ +S + SS E SSA +AA TQA ESS A ST + Sbjct: 122 PASTTEASSTSTSEASSAATESSSSSE---SSAETSSNAASTQATVSSESSSAASTIASS 178 Query: 72 ASFIVPS 52 A V S Sbjct: 179 AESSVAS 185
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG +G E G G+I GLPG G GE RG S G PG Sbjct: 671 EPGPKGEQGASGEEGEAGERGELGDI-GLPGPKGSAGNPGEPGLRGPEGSRGLPG 724 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 13/77 (16%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG +GD + PP G GE G PGADGL G G+ G Sbjct: 286 PGIDGIDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGE 345 Query: 127 PG-----GRPDRVLVSP 92 PG G P R + P Sbjct: 346 PGVPGSRGFPGRGIPGP 362 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG M + G ++ PP G G GLPG+ G + G G + S G PG Sbjct: 597 PGQMGNSGKPGQQGPPGEVGPRGP-QGLPGSRGELGPVGSPGLPGKLGSLGSPG 649 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Frame = -2 Query: 283 PGGMRSEGDHSER-VPPCRG-------GRDGE--IVGLPGADGLVDRAGEEQRRGAVVSS 134 PG + S+G E VP RG G G GLPG G V G+ RRG Sbjct: 334 PGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPP 393 Query: 133 GHPGGR 116 G PG R Sbjct: 394 GPPGPR 399 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 113 PG ++G+ + PP G G + G+PG G AGE+ GA G G G+P Sbjct: 549 PGMPGTKGEPGKPGPPGDAGLQG-LPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKP 606
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Frame = -2 Query: 283 PGGMRS---EGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGH 128 PGG+ S +G +R P + G G +G+PG G+ G +GA+ G Sbjct: 1538 PGGVGSPGRDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPPGV 1597 Query: 127 PGGRPDR 107 PG + +R Sbjct: 1598 PGAKGER 1604
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G R P GR GE GLPG+ G + AG+E G G PG Sbjct: 420 PGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPG 478
>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting| complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DBD-interacting protein 1) (PDIP1) Length = 2649 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = -3 Query: 261 ETTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTD 82 E A PA D TA ++ +A + + V+ V AAG AAA +ES+ A + Sbjct: 999 EPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAE 1058
>PEX7_MOUSE (P97865) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 59 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP 205 T K G V H +++ W + R L+++GS D+TV+ W P Sbjct: 92 TAKATGPLQVYKEHTQEVYSVDW---SQTRGEQLVVSGSWDQTVKVWDP 137
>PEX7_CRIGR (Q8R537) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 318 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 59 TMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP 205 T K G V H +++ W + R L+++GS D+TV+ W P Sbjct: 92 TAKATGPLQVYKEHTQEVYSVDW---SQTRGEQLVVSGSWDQTVKVWDP 137 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +2 Query: 62 MKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 +K AG + V AH+ I + W ++ L++TG++D ++R W Sbjct: 180 VKTAGVRIVIPAHQTEILSCDWCKYNEN----LVVTGAVDCSLRGW 221
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG S+GD PP + G PGA G + G + G + GHPG + Sbjct: 273 PGAQGSKGDFGRPGPP-------GLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAK 321
>IFA1_CAEEL (P90901) Intermediate filament protein ifa-1 (Intermediate filament| protein A1) (IF-A1) (Cel IF A1) Length = 575 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -3 Query: 258 TTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 100 TTPSA P GG T + Q R + + +RS A S G AA+ I S Sbjct: 14 TTPSARAPLGGRTTGNVTS-QDRMLKIVTEMRSGAGSGLSPFGQNAASTIRDS 65
>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor| Length = 3176 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 DPG D ER P G G + G+PG DG+ GE + G G PG + ++ Sbjct: 2156 DPGNPGQ--DSQERGPKGETGDLGPM-GVPGRDGVPGGPGETGKNGGFGRRGPPGAKGNK 2212
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG G E PP G+ G PGA G GE+ +G + G PG Sbjct: 16 DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGGQGEKGAKGEAGAEGPPG 66 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQR---RGAVVSSGH 128 PG +G PP G G+ G PG GL+ GE+ RG + G Sbjct: 98 PGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGS 157 Query: 127 PGGRPDRVLVSPVHRLEP 74 PG + D + P + P Sbjct: 158 PGAKGDGGIPGPAGPIGP 175
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/54 (37%), Positives = 21/54 (38%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG G ER PP GG PG G G E +GA G PG Sbjct: 515 PGGKGDSGAPGERGPPGAGGP-------PGPRGGAGPPGPEGGKGAAGPPGPPG 561 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/56 (35%), Positives = 22/56 (39%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG G + PP G G G PGA G + AG RG G PG R Sbjct: 758 PGSPGISGPKGDSGPPGERGAPGP-QGPPGAPGPLGIAGLTGARGLAGPPGMPGAR 812 Score = 28.1 bits (61), Expect = 5.3 Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -2 Query: 286 DPG--GMRSE-GDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEE---QRRGAVVSSGHP 125 DPG G R E G P G+DG G PGA+GL AGE RG ++G P Sbjct: 286 DPGPRGERGEAGSPGIAGPKGEDGKDGS-PGEPGANGLPGAAGERGVPGFRGPAGANGLP 344 Query: 124 G 122 G Sbjct: 345 G 345 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G PP + G G PG G G RG+ S GHPG Sbjct: 977 PGPAGPRGPVGPSGPPGKDGASGH----PGPIGPPGPRGNRGERGSEGSPGHPG 1026 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 19/73 (26%) Frame = -2 Query: 283 PGGMRSE-------GDHSERVPPC------------RGGRDGEIVGLPGADGLVDRAGEE 161 P G++ E G + ER PP GRDG PG+DGL R G Sbjct: 817 PQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGN----PGSDGLPGRDGAP 872 Query: 160 QRRGAVVSSGHPG 122 +G +G PG Sbjct: 873 GAKGDRGENGSPG 885
>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)| Length = 367 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/85 (25%), Positives = 33/85 (38%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 277 HE I A +P A+ + S D+TV W + GHA+ V L Sbjct: 102 HEREITKIACIPKANQ-----FFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSP 156 Query: 278 XXXXXXXVSIDSHIRVFDVDSGASV 352 S D+ + ++DV +G V Sbjct: 157 DSSQLCTGSRDNSLLLWDVGTGQCV 181
>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 29.3 bits (64), Expect = 2.4 Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 41/124 (33%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDD--------------LAVASPPAG-------------- 238 H + L TGS D+TVR W L++A P G Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 494 Query: 239 -------------GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSE 379 GH + SL S+D+ +RV+D+ + D + SE Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSE 554 Query: 380 VWGV 391 + GV Sbjct: 555 LVGV 558
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 AHE IW+ AW P +L +GS D T + W Sbjct: 373 AHEGMIWSLAWHPLGH-----ILCSGSNDHTSKFW 402
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + S G ++ PP G G GLPG+ G V G G + S G PG Sbjct: 597 PGQLGSSGKPGQQGPPGEVGPRGPR-GLPGSRGPVGPEGSPGIPGKLGSVGSPG 649 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGA------VVSSGHPG 122 PG ++G+ + PP G G + G+PG G AGE+ GA + SSG PG Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQG-LPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPG 607 Query: 121 --GRPDRV 104 G P V Sbjct: 608 QQGPPGEV 615 Score = 27.7 bits (60), Expect = 6.9 Identities = 24/77 (31%), Positives = 28/77 (36%), Gaps = 13/77 (16%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG +GD + PP G G+ G PGADGL G G G Sbjct: 286 PGIDGIDGDRGPKGPPGPPGPPGDPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGE 345 Query: 127 PG-----GRPDRVLVSP 92 PG G P R + P Sbjct: 346 PGVPGSRGFPGRGIPGP 362
>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog| Length = 492 Score = 29.3 bits (64), Expect = 2.4 Identities = 32/126 (25%), Positives = 48/126 (38%) Frame = +2 Query: 5 LSSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDE 184 L+++ K G L E T +LA K + A D + L LTG ID+ Sbjct: 173 LTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDIKGN-LSLTGGIDK 231 Query: 185 TVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLD 364 TV + + V GH + ++ S DSHIRV+ +S +D Sbjct: 232 TVVLYDYEKEQVMQT-FKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIID 290 Query: 365 AAPSEV 382 + V Sbjct: 291 VHQAPV 296
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)| (Protein archipelago) Length = 1326 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 +++GS D T++ W + GH GV S S D ++V+D+DS Sbjct: 1008 IVSGSDDNTLKVWSAVN-GKCLRTLVGHTGGVWSSQMSGNIIISG--STDRTLKVWDMDS 1064 Query: 341 GASVTTLDAAPSEV 382 GA V TL S V Sbjct: 1065 GACVHTLQGHTSTV 1078 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 L+++G+ D V+ W P+ GH V SL S+D+ IRV+DV+ Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFDGLHVVSG--SLDTSIRVWDVE 1183 Query: 338 SGASVTTL 361 +G TL Sbjct: 1184 TGNCKHTL 1191
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -2 Query: 238 PCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P + G+ GE + GLPG DGL R G +GA G G Sbjct: 67 PGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLG 107 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGH 128 PG S+G+ ER GR GE+ G+PG G+ GE RG+ + G Sbjct: 339 PGRAGSKGEKGER------GRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALG- 391 Query: 127 PGGRP 113 P G P Sbjct: 392 PQGPP 396
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 29.3 bits (64), Expect = 2.4 Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 12/84 (14%) Frame = -2 Query: 217 GEIVGLPGADGLVDRAGEEQRRGAVVS-------SGHPGGRPDRVLV----SPVHRLEPR 71 G+ VG + RA EEQRRG S SG GGR D P R +PR Sbjct: 411 GDSVGTIFREAREQRAAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPR 470 Query: 70 KLHRTLSSLSQT-KP*VFDLAAEA 2 ++ +QT KP V AA+A Sbjct: 471 VEGEAPAAAAQTEKPVVAAAAAQA 494
>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 456 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G+ E P R GR G + G+PG G G +G + G PG R Sbjct: 113 PGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSR 170 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGH--PG 122 G M S+G R G G++ G PG G++ + GE +G +GH P Sbjct: 171 GPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPT 230 Query: 121 GRPDR 107 GRP + Sbjct: 231 GRPGK 235
>RAE1_SCHPO (P41838) Poly(A)+ RNA export protein| Length = 352 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVV 259 AH+D++ +V A P +L TGS D+T++ W Q +A S P +A+ V Sbjct: 113 AHDDAVRCVRFVEAMGTSP--ILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCV 168
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 10/60 (16%) Frame = -2 Query: 262 GDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 113 G ER P G GE GLPGA+GL GE+ +G V G PG G+P Sbjct: 70 GPPGERGPLGLPGEKGETGLRGPPGPAGLPGANGLNGDIGEKGDQGPVGLPGVPGIPGKP 129
>CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor| Length = 1019 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG GD E PP GR+G + G PG G G++ RG G PG Sbjct: 434 PGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPG 492 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG +G E + GR G I G PG G GE G G PG Sbjct: 361 DPGAYGPKGGKGEPGEDGKPGRQG-IPGSPGEKGAPGNRGEPGPLGETGDEGSPG 414
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 631 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 685 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/59 (35%), Positives = 23/59 (38%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 +PGG G ER P G R G PG DGL G RG +G G D Sbjct: 468 EPGGAGPIGPPGERGAP--GNR-----GFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG S G R P GR GE GLPG+ G V +G+E G G PG Sbjct: 426 PGNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPG 484 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG + ++G PP G +G+ G PG G AG RG+ S G PG Sbjct: 368 EPGSVGAQG------PPGPSGEEGKR-GSPGEAGSAGPAGPPGLRGSPGSRGLPG 415
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRR---GAVVS 137 PG EG R P G G G PGADG+ G R GAV Sbjct: 449 PGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGAVGP 508 Query: 136 SGHPG--GRP 113 G PG GRP Sbjct: 509 KGSPGEAGRP 518 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G E PP G G G PGADG G G + G PG R Sbjct: 351 GSEGPQGSRGEPGPPGPAGAAGP-AGNPGADGQPGAKGATGAPGIAGAPGFPGAR 404 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G S G + PP G+DG G PGA G G +GA G PG R Sbjct: 531 GSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGER 587 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Frame = -2 Query: 241 PPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PP GR+G G PG DG G+ G G PG Sbjct: 997 PPGEAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPG 1038 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G PP G +GLPG G + G + RG +G PG Sbjct: 860 PGATGFPGAAGRVGPPGPSGN----IGLPGPPGPAGKZGSKGPRGETGPAGRPG 909 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG +G PP G+ G ++G PG G G+ RGA G PG Sbjct: 545 PGPAGQDGRPGPAGPPGARGQAG-VMGFPGPKGAAGEPGKPGERGA---PGPPG 594
>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)| Length = 831 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%) Frame = +2 Query: 8 SSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADH----RPTALLLTGS 175 S ++K F +++ T ++V HE+ + A W P+ + LL+ S Sbjct: 251 SLRLKENTFTIKDGGVRTTVAVTLETVLAGHENWVNAVHWQPSFYKDGVLQQPVRLLSAS 310 Query: 176 IDETVRAWQPDDLA------VASPPAGGHALG 253 +D+T+ W PD+ + V GG+ LG Sbjct: 311 MDKTMILWAPDEESGVWLEQVRVGEVGGNTLG 342
>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of| lin-12) (Sel-10 protein) Length = 587 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Frame = +2 Query: 155 ALLLTGSIDETVRAWQPDDLAVASPPAGGHAL----GVVSLXXXXXXXXXXXVSI--DSH 316 +++ +GS+D ++R W + P G + G SL VS DSH Sbjct: 431 SIVCSGSLDTSIRVWD------FTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSH 484 Query: 317 IRVFDVDSGASVTTLDAAPSEV 382 +RV+D+ G V L S + Sbjct: 485 VRVWDIHEGTCVHMLSGHRSAI 506
>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage| protein 23) Length = 665 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 +++G D T++ W D + S GH V+ L S D+ +RV+DV++ Sbjct: 235 IVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVLCLQYDNRVIISG--SSDATVRVWDVET 291 Query: 341 GASVTTL 361 G + TL Sbjct: 292 GECIKTL 298
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Frame = -2 Query: 283 PGGMRSE-------GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVV 140 P G+R E GD PP G GE + G PG GL GE +GA+ Sbjct: 687 PQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMG 746 Query: 139 SSGHPGGRPDR 107 +G G + R Sbjct: 747 PAGPDGQQGPR 757
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G PP GG+ G+ G+PG G G RG G PG + Sbjct: 591 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 645 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/59 (35%), Positives = 23/59 (38%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 +PGG G ER P G R G PG DGL G RG +G G D Sbjct: 428 EPGGAGPIGPPGERGAP--GNR-----GFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 479
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/77 (25%), Positives = 28/77 (36%) Frame = +2 Query: 155 ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 334 AL+ TGS D V+ W D H V+ L D I+ +D Sbjct: 604 ALIATGSADRNVKIWGL-DFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDA 662 Query: 335 DSGASVTTLDAAPSEVW 385 D + TL+ E+W Sbjct: 663 DKFEHIQTLEGHHQEIW 679
>POP2_SCHPO (O14170) WD-repeat protein pop2 (Proteolysis factor sud1)| Length = 703 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 +L++GS D ++R W+ GH+L + S+ S+D IRV+D+ Sbjct: 519 ILVSGSYDSSIRIWRVST-GECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLS 577 Query: 338 SGASVTTLD 364 +G L+ Sbjct: 578 TGTCKYVLE 586 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 H++ +WA H T L++GSID+TVR W Sbjct: 390 HKEGVWAVKI-----HENT--LVSGSIDKTVRVW 416
>POP1_SCHPO (P87060) WD-repeat protein pop1| Length = 775 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = +2 Query: 158 LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 337 L+++ S D T+R W+ V GH V S+ D+ IR+++++ Sbjct: 589 LIVSASYDGTLRVWKAST-GVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647 Query: 338 SGASVTTL 361 SG + TL Sbjct: 648 SGELLQTL 655
>RUMA_XYLFT (Q87BR3) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 443 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -2 Query: 217 GEIVGLPGADGLVDRAGEEQRRGAV 143 GE+VG+ G GLV+RA E RR + Sbjct: 319 GEVVGVEGDIGLVERARENARRNGL 343
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 110 PG +GD PP G +G+ G G + G+ RRG G PG G P Sbjct: 372 PGPKGEKGDTGPPGPPALPGS----LGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPG 427 Query: 109 RVLVSPVHR 83 + +H+ Sbjct: 428 PPGIQGIHQ 436 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEI----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +PG G ER P G G+I +G+PG G AGE +G G PG Sbjct: 595 NPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPRGLPGLPG 653 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 +PG GD P G+ G G+PGA G++ + G+ +G G PG R Sbjct: 903 EPGERGPVGDIGFPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDR 961 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/48 (37%), Positives = 20/48 (41%) Frame = -2 Query: 265 EGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 +GD PP G G+ PGA G GE RG V G PG Sbjct: 874 KGDRGPAGPPGIAGMSGK----PGAPGPPGVPGEPGERGPVGDIGFPG 917
>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1888 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 G +G +R P + G G VG+PGA G+ G + +G V + G PG + Sbjct: 1552 GSPGRDGAQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGITGSQGPQGDVGAPGAPGPK 1611 Query: 115 PDR 107 +R Sbjct: 1612 GER 1614
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 D G M S+G +R P G G L G DGL GEE G + G PG Sbjct: 83 DFGDMGSKGARGDRGLPGSPGHPG----LQGLDGLPGLKGEEGIPGCNGTDGFPG 133 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 262 GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 GD+ PP + G G G PG G+ G++ +GA +G+PG Sbjct: 1465 GDNGLSGPPGKAGYPGAPGTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPG 1516 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -2 Query: 238 PCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 P G DG + GLPGADG GE G G PG Sbjct: 993 PGEHGTDG-LPGLPGADGQPGFVGEAGEPGTPGYRGQPG 1030 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G E P GR G G+PG GL GE+ G+ G+PG Sbjct: 1103 PGITGMPGLKGESGLPGLPGRQGND-GIPGQPGLEGECGEDGFPGSPGQPGYPG 1155
>MIAA_CAUCR (Q9A6J5) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 295 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 177 IEPVRSSAVGRWSAAGTQAAAQIESS*APS 88 ++P +VGRW A TQA A+I++ P+ Sbjct: 71 VDPALGWSVGRWLEAATQALAEIQARGKPA 100
>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I| Length = 509 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW---QPDD 211 AH+ IW+ + P LL TGS D+T R W +PDD Sbjct: 358 AHDLGIWSMQYHPLGH-----LLCTGSNDKTTRFWSRSRPDD 394
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/65 (36%), Positives = 29/65 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG G + PP G DG VG+PGA AG +G V + G PG R Sbjct: 256 PGSRGEPGAVGPKGPP---GVDG--VGIPGA------AGVPGPQGPVGAKGEPGLRGPPG 304 Query: 103 LVSPV 89 L+ PV Sbjct: 305 LIGPV 309 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Frame = -2 Query: 277 GMRSE----GDHSERVPPCRGGRDGEI-VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 113 G+R E GD R PP G G + +PG G G RG G PG R Sbjct: 137 GLRGEPGIRGDQGLRGPPGPPGLPGPSGITVPGKPGAQGAPGPPGFRGEPGPQGEPGPRG 196 Query: 112 DRVL 101 DR L Sbjct: 197 DRGL 200
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG G ER PP + G PG G G E +GA G PG Sbjct: 671 PGGKGDAGAPGERGPP-------GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG 717 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 GG G + + P G GE G+PG G G++ G ++G PG +R Sbjct: 429 GGAGEPGKNGAKGEPGPRGERGE-AGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER 485 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G PP + G G PG G G RG+ S GHPG Sbjct: 1133 PGPAGPRGPVGPSGPPGKDGTSGH----PGPIGPPGPRGNRGERGSEGSPGHPG 1182 Score = 27.3 bits (59), Expect = 9.0 Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRG--GRDGEIVGLPGADGLVDRAGEEQR---RGAVVSSGHPG 122 P G R E VP +G G+DG G PGA+GL AGE RG +G PG Sbjct: 445 PRGERGEAG-IPGVPGAKGEDGKDGS-PGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/53 (35%), Positives = 20/53 (37%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G S+G PP G G PGA G V AG GA G PG Sbjct: 324 GARGSDGQPGPPGPPGTAGFPGS----PGAKGEVGPAGSPGSNGAPGQRGEPG 372
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -2 Query: 265 EGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 EG+ PP R G G G PG+ G + +G+ G S+G PG R Sbjct: 921 EGNSGNDGPPGRPGAAGFKGDRGEPGSPGALGSSGQPGPNGPAGSAGRPGNR 972 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PGG + G+ P G G +G+PG G AG E G G PG Sbjct: 879 PGGPGAVGEPGRLGPAGASGPRGPAGNIGMPGMTGTQGEAGREGNSGNDGPPGRPG 934
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG S G S P C GG+ G+PG +G G+ RG + G PG Sbjct: 49 PGRPGSPG--SSGPPGCPGGQ-----GIPGLEGHPGEVGDPGPRGLLGDPGRPG 95
>WDR34_MOUSE (Q5U4F6) WD-repeat protein 34| Length = 535 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 28/126 (22%) Frame = +2 Query: 89 DGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ--------------------PD 208 D H D ++ W+P H +L+ + D V W+ P Sbjct: 261 DDTHTDPVYQVLWLPEPRHSHRFQVLSAATDGKVLLWRGSGAGQLRLTKGFALAVQQLPR 320 Query: 209 DLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSG--------ASVTTLD 364 + PP G +GV S+ S DS + V + G + V L Sbjct: 321 STKLKKPPRGETEVGVTSVAFS---------SFDSSLFVLGTEGGFPLKCSLASEVAALT 371 Query: 365 AAPSEV 382 PS V Sbjct: 372 RMPSSV 377
>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation| suppressor protein) (Repressor AER2) Length = 713 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 13/103 (12%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW-------------QPDDLAVASPPAG 238 HE I++ + P+ D L++GS D TVR W + VA P Sbjct: 484 HEQDIYSLDYFPSGDK-----LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 538 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDA 367 G + SL D +RV+D ++G V LD+ Sbjct: 539 GKYIAAGSL--------------DRAVRVWDSETGFLVERLDS 567
>CO4A3_BOVIN (Q28084) Collagen alpha-3(IV) chain (Fragment)| Length = 471 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G + PP G G +I+ LPG+ G AGE +G G PG Sbjct: 127 PGPPGPPGQSGPKGPPGVRGEPGTVKIISLPGSPGPPGSAGEPGMQGEPGPPGPPG 182
>TUP1_KLULA (P56094) Transcriptional repressor TUP1| Length = 682 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/90 (25%), Positives = 40/90 (44%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 277 HE I++ + P+ + L++GS D TVR W + + + V++ Sbjct: 447 HEQDIYSLDYFPSGNK-----LVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGE 501 Query: 278 XXXXXXXVSIDSHIRVFDVDSGASVTTLDA 367 S+D +RV+D D+G V LD+ Sbjct: 502 GKFIAAG-SLDRTVRVWDSDTGFLVERLDS 530
>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)| Length = 738 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 202 H ++WA +P L+LTGS D+TV+ W+ Sbjct: 93 HTAAVWAVKILPEQ-----GLMLTGSADKTVKLWK 122
>PEX7_PICPA (O59894) Peroxisomal targeting signal 2 receptor (PTS2 receptor)| (Peroxin-7) Length = 376 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/34 (52%), Positives = 19/34 (55%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 199 HE +I AW P H PT LL T S D TVR W Sbjct: 280 HEFAIRKLAWSP---HGPTQLL-TCSYDMTVRVW 309
>PLAP_MOUSE (P27612) Phospholipase A-2-activating protein (PLAP)| Length = 646 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 202 H ++WA +P L+LTGS D+T++ W+ Sbjct: 93 HTAAVWAVKILPEQ-----GLMLTGSADKTIKLWK 122
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/54 (35%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG + G E P G DG+ PG DGL+ GE G G PG Sbjct: 55 PGKVGPPGSKGEPGKPGPDGPDGK----PGIDGLMGAKGEPGPVGTPGVKGQPG 104
>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409| Length = 326 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPP 232 HE + WV +A P L T S D T+R WQ D + P Sbjct: 247 HEYKVVPTGWVNSAQFYPKGEWLATASDDGTIRFWQKDGQLIYELP 292
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 28.5 bits (62), Expect = 4.1 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 3/129 (2%) Frame = +2 Query: 5 LSSQIKHLGFRLRERREGT---MKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGS 175 L+ ++ H+ RL G+ ++ K H+ +W D LL +GS Sbjct: 285 LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGD-----LLFSGS 339 Query: 176 IDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVT 355 D+T++ W GH G+V L S D I V+D+ + V Sbjct: 340 SDKTIKVWDTCTTYKCQKTLEGHD-GIV-LALCIQGCKLYSGSADCTIIVWDIQNLQKVN 397 Query: 356 TLDAAPSEV 382 T+ A + V Sbjct: 398 TIRAHDNPV 406
>PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = +2 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 GH++GV + +D+ RV+D+ +G + L+ E++G+ Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI 412
>PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) Length = 521 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = +2 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 GH++GV + +D+ RV+D+ +G + L+ E++G+ Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI 412
>RAD60_SCHPO (Q9USX3) DNA repair protein rad60| Length = 406 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -3 Query: 261 ETTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 100 +TTP+AC G + + C + VS + R++A R ++ ++AA SS Sbjct: 85 DTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSS 138
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX-XXXXXXXXVSIDSHIRVFDVD 337 L T S D+TVR W D+ + GH+ V SL D+ IR + ++ Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767 Query: 338 SGASVTTLDAAPSEV 382 +G+ +++ Sbjct: 768 NGSCTRVYKGGSTQI 782
>PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60| kDa protein) (WD splicing factor Prp4) (hPrp4) Length = 522 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = +2 Query: 239 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 391 GH++GV + +D+ RV+D+ +G + L+ E++G+ Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI 413
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG----GRP 113 GGM G E+ P G+PG+ G+ GE+ +G SG PG GRP Sbjct: 1014 GGMGLPGSPGEKGVP----------GIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRP 1063 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -2 Query: 226 GRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 GRDG GLPG G G + RG G PG R D Sbjct: 562 GRDGH-PGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGD 599
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -2 Query: 226 GRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 GRDG GLPG G G + RG G PG R D Sbjct: 562 GRDGH-PGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGD 599 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/65 (30%), Positives = 26/65 (40%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +PG G E+ P GR G PGA G GE G S G PG + ++ Sbjct: 1152 EPGSDGIPGSAGEKGEPGLPGRG--FPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQ 1209 Query: 106 VLVSP 92 + P Sbjct: 1210 GFMGP 1214
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/64 (32%), Positives = 24/64 (37%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 104 PG GD E P G G G PG G AG G ++GH G + DR Sbjct: 675 PGPAGGPGDRGESGPAGPSGVAGPR-GAPGERGEAGPAGPTGFAGPPGAAGHTGAKGDRG 733 Query: 103 LVSP 92 P Sbjct: 734 AKGP 737
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 28.5 bits (62), Expect = 4.1 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 3/129 (2%) Frame = +2 Query: 5 LSSQIKHLGFRLRERREGT---MKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGS 175 L+ ++ H+ RL G+ ++ K H+ +W D LL +GS Sbjct: 361 LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGD-----LLFSGS 415 Query: 176 IDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVT 355 D+T++ W GH G+V L S D I V+D+ + V Sbjct: 416 SDKTIKVWDTCTTYKCQKTLEGHD-GIV-LALCIQGCKLYSGSADCTIIVWDIQNLQKVN 473 Query: 356 TLDAAPSEV 382 T+ A + V Sbjct: 474 TIRAHDNPV 482
>MSI4_ARATH (O22607) WD-40 repeat protein MSI4 (Altered cold-responsive gene 1| protein) Length = 507 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = +2 Query: 38 LRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVR 193 L + R GT + V+ AH+ + W P D+ L+LTGS D TVR Sbjct: 319 LWDARTGTNPVT---KVEKAHDADLHCVDWNPHDDN----LILTGSADNTVR 363
>PLAP_RAT (P54319) Phospholipase A-2-activating protein (PLAP)| Length = 647 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 202 H ++WA +P L+LTGS D+T++ W+ Sbjct: 93 HTAAVWAVKILPEQ-----GLMLTGSADKTIKLWK 122
>FCER2_HUMAN (P06734) Low affinity immunoglobulin epsilon Fc receptor| (Lymphocyte IgE receptor) (Fc-epsilon-RII) (BLAST-2) (Immunoglobulin E-binding factor) (CD23 antigen) [Contains: Low affinity immunoglobulin epsilon Fc receptor membrane-bound form; Low Length = 321 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 8/58 (13%) Frame = +2 Query: 86 VDGAHED-SIWAAAWVPAADHRPTALLLTGS-------IDETVRAWQPDDLAVASPPA 235 VDG+H D S WA + +++ GS D + AW D LA +PPA Sbjct: 235 VDGSHVDYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPA 292
>YNA6_YEAST (P41318) Hypothetical 34.0 kDa Trp-Asp repeats-containing protein| in SIS1-MRPL2 intergenic region Length = 303 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/60 (26%), Positives = 22/60 (36%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L T S D T R W DD GH V S D ++R++D+ + Sbjct: 222 LATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLST 281
>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 417 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAG-------GHALGVVSLXXXXXXXXXXXVSIDSHI 319 L +GS D+TV+ W DL + G GH G+ ++ DS I Sbjct: 179 LFSGSEDKTVKCW---DLERTNSLLGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVI 235 Query: 320 RVFDVDSGASVTTLDAAPSEVWGV 391 RV+D+ S + L S++ + Sbjct: 236 RVWDLRSRTEIMVLSGHRSDITSI 259
>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1261 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 122 AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPA 235 +WV P +LLL+ S D+T+R W+ D + +S A Sbjct: 885 SWVHCVQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVA 923
>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 205 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +2 Query: 119 AAWVPAADHRPTALLLTGSI--DETVRAWQPDDLAVASPPAGGHALGVV 259 AAW P+A RP L + S + A PD A A+PPA G V Sbjct: 17 AAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAAPPAEPAPAGFV 65
>YHU3_YEAST (P38844) Protein YHR143W precursor| Length = 325 Score = 28.5 bits (62), Expect = 4.1 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%) Frame = -3 Query: 384 QTSEGAASSVVTEAPESTSKTRM-----WLSMETXXXXXXXXXXARETTPSACPPAGGDA 220 Q+ E + +S T P ++S R+ ++S + ET+ S+ + A Sbjct: 132 QSIESSGTSSATAEPSASSGFRLTSSSAFVSSTAPFSSQLSSSSSSETSSSSFSTSSSSA 191 Query: 219 -----TARSSGCQARTVSSIEPVRS-SAVGRWSAAGTQAAAQIESS*APSTDLNPASFIV 58 ++ SS T+ ++ P S S + + A + + + +ESS ST S +V Sbjct: 192 PLSLTSSSSSSSSFATIITLAPSSSKSGNSQLTLASSSSTSAVESSQTGSTIARTTSTLV 251 Query: 57 PS 52 PS Sbjct: 252 PS 253
>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| (NORI-1) Length = 605 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP-PAGGHAL 250 AH+ I+A +W P + H LL+ S D+T + W +V S P G L Sbjct: 231 AHDGGIYAISWSPDSTH-----LLSASGDKTSKIWDVSVNSVVSTFPMGSTVL 278
>SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 165 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/54 (38%), Positives = 23/54 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG M GD PC G DG LPGA G+ GE+ G G PG Sbjct: 9 PGPMGPPGDM-----PCFPGNDG----LPGAPGIPGECGEKGEPG---ERGPPG 50
>PRP46_EMENI (Q5BE22) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 46) Length = 452 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTAL-LLTGSIDETVRAWQPDDLA 217 A S+ A A + + T L L+TG D+T++ W+ DD A Sbjct: 393 AQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWKQDDQA 434
>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1470 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Frame = -2 Query: 283 PGGMRSE-------GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVV 140 P G+R + GD PP G GE + G PG GL GE +GA+ Sbjct: 691 PQGLRGDVGLPGVKGDKGLMGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMG 750 Query: 139 SSGHPGGRPDR 107 +G G + R Sbjct: 751 PAGADGQQGSR 761
>GRWD1_RAT (Q5XI13) Glutamate-rich WD repeat-containing protein 1| Length = 445 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 4/83 (4%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD---LAVASPPAGGHALGVVSLX 268 H +A W P R LLTG + + W P D V P GH V L Sbjct: 212 HMGEGFALDWSPRVPGR----LLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQ 267 Query: 269 -XXXXXXXXXXVSIDSHIRVFDV 334 S D+ IR++D+ Sbjct: 268 WSPTEDTVFASCSADASIRIWDI 290
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 113 DPG G P G G I+G GA G+ G+ G G PG G+P Sbjct: 228 DPGEQGPRGPQGPPGPVPSTGAKGTIIGPEGAPGMKGEKGDPGEAGPRGFPGTPGVAGQP 287 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = -2 Query: 262 GDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G+ E P G GE GLPG DGL +G GA G PG Sbjct: 1443 GEKGEMGPMGAPGIRGE-KGLPGLDGLPGPSGPPGFAGAKGRDGFPG 1488
>C1QA_MOUSE (P98086) Complement C1q subcomponent subunit A precursor| Length = 245 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -2 Query: 265 EGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +GD E PP + G VGLPG G + +G + +G G+PG D+ Sbjct: 67 KGDPGESGPPGKPGN----VGLPGPSGPLGDSGPQGLKGV---KGNPGNIRDQ 112
>POLG_HCV1 (P26664) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/NT Length = 3010 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 10/92 (10%) Frame = -3 Query: 357 VVTEAPESTS----KTRMWLSMETXXXXXXXXXXARETTPSACPPAGGDATARSSGCQAR 190 V+TE+ ST+ TR + S T + E PS CPP A Sbjct: 2333 VLTESTLSTALAELATRSFGSSSTSGITGDNTTTSSEPAPSGCPP----------DSDAE 2382 Query: 189 TVSSIEPVRSS------AVGRWSAAGTQAAAQ 112 + SS+ P+ + G WS ++A A+ Sbjct: 2383 SYSSMPPLEGEPGDPDLSDGSWSTVSSEANAE 2414
>TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein| Length = 312 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 256 HSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 H+E PP G+ GL A G EQ + AV ++G GG+ Sbjct: 152 HAELAPPQGQGQATVFPGLATAGGDWTEGAGEQEKEAVAAAGAAGGK 198
>HCF_DROME (Q9V4C8) Host cell factor (dHcf) [Contains: HCF N-terminal chain; HCF| C-terminal chain] Length = 1500 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/57 (28%), Positives = 32/57 (56%) Frame = +2 Query: 11 SQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSID 181 +Q ++ F+ R+ + + F++VDG+ +++ +AA + AA TAL L I+ Sbjct: 1167 NQDENKKFKQRQESSPSQNIHQFQNVDGSQLEALASAALLQAATSDTTALALKELIE 1223
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G + R PP G GE G PGA G AG G G PG Sbjct: 158 PGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYKPGQPG 216
>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 458 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGH--PGGRPD 110 PG +G ER G GE G PG G++ + GE +G +GH P GRP Sbjct: 178 PGSRGEKGSRGERGDL---GPKGE-KGFPGFPGMLGQKGEMGPKGESGIAGHRGPTGRPG 233 Query: 109 R 107 + Sbjct: 234 K 234
>STRN3_MOUSE (Q9ERG2) Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)| Length = 796 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 95 AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 211 AH D++W A+ + LL+ S D T+R W P + Sbjct: 583 AHTDAVWGLAYSGIKNQ-----LLSCSADGTIRLWNPQE 616
>COLQ_MOUSE (O35348) Acetylcholinesterase collagenic tail peptide (AChE Q| subunit) (Acetylcholinesterase-associated collagen) (Fragment) Length = 236 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGH--PGGRPD 110 PG +G ER G GE G PG G++ + GE +G +GH P GRP Sbjct: 141 PGSRGEKGSRGERGDL---GPKGE-KGFPGFPGMLGQKGEMGPKGESGLAGHRGPTGRPG 196 Query: 109 R 107 + Sbjct: 197 K 197 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +G+ + P R GR G + G+PG G G +G + G PG R Sbjct: 75 PGKTGPKGEKGDLGRPGRKGRPGPPGVPGMPGPVGWPGPEGPRGEKGDLGMMGLPGSR 132
>TUP1_CANAL (P56093) Transcriptional repressor TUP1| Length = 514 Score = 28.1 bits (61), Expect = 5.3 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG-GHALGVVSLXXX 274 HE I++ + P D L++GS D +VR W DL + GV ++ Sbjct: 298 HEQDIYSLDFFPDGDR-----LVSGSGDRSVRIW---DLRTSQCSLTLSIEDGVTTVAVS 349 Query: 275 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDA 367 S+D +RV+D +G V LD+ Sbjct: 350 PDGKLIAAGSLDRTVRVWDSTTGFLVERLDS 380
>PHK_BRAJA (Q89S87) Probable phosphoketolase (EC 4.1.2.-)| Length = 801 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 74 GFKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVAS 226 G K VDG + W A VP A R L +++ +R+++P+ L AS Sbjct: 300 GPKEVDGKKVEGFWRAHQVPVASCRENPAHLK-VLEDWMRSYEPEKLFDAS 349
>CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)| Length = 526 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 PG G+ PP G G ++G PG GL GE G + G PG Sbjct: 3 PGEKGPSGEAGTAGPPGTPGPQG-LLGAPGILGLPGSRGERGLPGVAGALGEPG 55
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 214 EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSL 44 E G A+ +DR E+R V G R D +L+SP KL R LS L Sbjct: 509 EFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGL 565
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -2 Query: 214 EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPVHRLEPRKLHRTLSSL 44 E G A+ +DR E+R V G R D +L+SP KL R LS L Sbjct: 509 EFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGL 565
>PRP46_CRYNE (Q5KDR4) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 473 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 322 H +L+TG D +VR W A GH V + S+DS +R Sbjct: 275 HPTLDVLVTGGRDASVRVWDMRTRANIF-TLTGHTSTVGDVKTQDSDPQIISGSMDSTVR 333 Query: 323 VFDVDSGASVTTL 361 ++D+ +G + TL Sbjct: 334 LWDLAAGKCMNTL 346
>EFG_THETH (P13551) Elongation factor G (EF-G)| Length = 691 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = -2 Query: 274 MRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVS 95 +R +H E V + G G +VGL GE+ R + S P D V + Sbjct: 356 LRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVID-VAIE 414 Query: 94 PVHRLEPRKLHRTLSSLSQTKP 29 P + + KL + L+ L++ P Sbjct: 415 PKTKADQEKLSQALARLAEEDP 436
>EFG_THET8 (Q5SHN5) Elongation factor G (EF-G)| Length = 691 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = -2 Query: 274 MRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVS 95 +R +H E V + G G +VGL GE+ R + S P D V + Sbjct: 356 LRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVID-VAIE 414 Query: 94 PVHRLEPRKLHRTLSSLSQTKP 29 P + + KL + L+ L++ P Sbjct: 415 PKTKADQEKLSQALARLAEEDP 436
>EFG_THET2 (Q72I01) Elongation factor G (EF-G)| Length = 691 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = -2 Query: 274 MRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVS 95 +R +H E V + G G +VGL GE+ R + S P D V + Sbjct: 356 LRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVID-VAIE 414 Query: 94 PVHRLEPRKLHRTLSSLSQTKP 29 P + + KL + L+ L++ P Sbjct: 415 PKTKADQEKLSQALARLAEEDP 436
>ALP_LECPS (Q68GV9) Alkaline serine protease ver112 precursor (EC 3.4.21.-)| Length = 382 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = -3 Query: 234 AGGDATA---RSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 100 AG D A +S C RTV+S+ S G +SAA QAAA+++SS Sbjct: 213 AGMDFVASDRQSRNCPRRTVASM-----SLGGGYSAALNQAAARLQSS 255
>GP135_RAT (Q7TQN7) Probable G-protein coupled receptor 135| Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 258 TTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQI 109 T P + P G +TA ++ +V+++ S GR AAG++ A + Sbjct: 16 TLPGSAHPGGAASTATAAALSFSSVATVTLGNQSDAGRPEAAGSRGPAPL 65
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Frame = -2 Query: 286 DPG--GMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 113 DPG G+ G ER P G+PGA G + G G +SG PG + Sbjct: 847 DPGPPGLDVPGPPGERGSP----------GIPGAPGPIGPPGSPGLPGKAGASGFPGTKG 896 Query: 112 DRVLVSP 92 + ++ P Sbjct: 897 EMGMMGP 903
>EMBC_MYCLE (Q9CDA7) Probable arabinosyltransferase C (EC 2.4.2.-)| Length = 1070 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = -3 Query: 231 GGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIES 103 G +AT +G +A+ +++P R+ +G W +G Q A++ S Sbjct: 804 GTNATPGINGSRAQLPYNLDPARTPVLGSWQ-SGIQVVARLRS 845
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 27.7 bits (60), Expect = 6.9 Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -2 Query: 283 PGGMRSE----GDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 P G + E GD + P G GE G PG +G AGE +GA G PG R Sbjct: 416 PRGPKGEPGRRGDPGTKGSPGSDGPKGE-KGDPGPEGPRGLAGEVGNKGAKGDRGLPGPR 474 Query: 115 -PDRVLVSP 92 P L P Sbjct: 475 GPQGALGEP 483 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 4/64 (6%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIV----GLPGADGLVDRAGEEQRRGAVVSSGHPGG 119 DPG GD + P GR G G PG G G E RG G PG Sbjct: 491 DPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEPGPRGPEGGRGDFGLKGEPGR 550 Query: 118 RPDR 107 + ++ Sbjct: 551 KGEK 554
>YGA4_YEAST (P53196) Hypothetical 46.4 kDa Trp-Asp repeats-containing protein| in PMC1-TFG2 intergenic region Length = 417 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +2 Query: 80 KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG--GHALG 253 + +D AH I + P+ + L++ S D ++ W D S P GH Sbjct: 129 REIDQAHVSEITKLKFFPSGE-----ALISSSQDMQLKIWSVKD---GSNPRTLIGHRAT 180 Query: 254 VVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLD 364 V + S+D IR+++ +G ++ T + Sbjct: 181 VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 217
>SEC13_PICPA (P53024) Protein transport protein SEC13| Length = 289 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 116 AAAWVPAADHRPTALLLTGSIDETVRAWQPDDLA 217 AA+W P + T ++G D V+ W+ DD A Sbjct: 150 AASWAPISLPDNTRRFVSGGCDNLVKIWRYDDAA 183
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQR------RGAVVSSG 131 +PG G + P + G GE + GLPG DGL G RGA+ +G Sbjct: 47 EPGPSGLPGPPGPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAG 106 Query: 130 HPG 122 PG Sbjct: 107 PPG 109 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG G+ +R P G G G+ GADGL GE G G PG R Sbjct: 413 PGPTGIRGESGDRGPAGVIGAKGS-QGIAGADGLPGDKGELGPFGPPGQKGEPGKR 467
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/55 (34%), Positives = 21/55 (38%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 D G G + P + G DG G PG DGL GE G G PG Sbjct: 52 DNGPPGKAGPPGPKGEPGKAGPDGPD-GKPGIDGLTGAKGEPGPMGIPGVKGQPG 105
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 8/62 (12%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRG--------GRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGH 128 P G + +S+ VP +G G+DG PG DG GE+ R G G Sbjct: 808 PAGPVVQSPNSQPVPGAQGPPGPQGPPGKDGT----PGRDGEPGDPGEDGRPGDTGPQGF 863 Query: 127 PG 122 PG Sbjct: 864 PG 865
>SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 precursor| (SP-A1) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis protein) (35 kDa pulmonary surfactant-associated protein) Length = 248 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = -2 Query: 286 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 DPG G E PC G DG LPGA G+ GE+ G G PG Sbjct: 53 DPGPPGPMGPPGEM--PCPPGNDG----LPGAPGIPGECGEKGEPG---ERGPPG 98
>FBXW2_MOUSE (Q60584) F-box/WD-repeat protein 2 (F-box and WD-40 domain protein| 2) (MD6 protein) Length = 422 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L+TGS D TV W+ + GH V S+ S D ++V+ + + Sbjct: 199 LVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYSDELDILVSGSADFAVKVWALSA 257 Query: 341 GASVTTL 361 G + TL Sbjct: 258 GTCLNTL 264
>CSP_PLAKH (P02894) Circumsporozoite protein precursor (CS)| Length = 363 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 G +++GD + P G DG G P A G AG+ Q +G ++G P + D Sbjct: 184 GQPQAQGDGANAGQPQAQG-DGANAGQPQAQGDGANAGQPQAQGDGANAGQPQAQGD 239 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 G +++GD + P G DG G P A G AG+ Q +G ++G P + D Sbjct: 160 GQPQAQGDGANAGQPQAQG-DGANAGQPQAQGDGANAGQPQAQGDGANAGQPQAQGD 215 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 G +++GD + P G DG G P A G AG+ Q +G ++G P + D Sbjct: 136 GQPQAQGDGANAGQPQAQG-DGANAGQPQAQGDGANAGQPQAQGDGANAGQPQAQGD 191 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 280 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 110 G +++GD + P G DG G P A G AG+ Q +G ++G P + D Sbjct: 112 GQPQAQGDGANAGQPQAQG-DGANAGQPQAQGDGANAGQPQAQGDGANAGQPQAQGD 167
>CO9A2_CHICK (P12108) Collagen alpha-2(IX) chain precursor| Length = 677 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 116 PG +GD P G GE G PG DG + G + GA S G GG+ Sbjct: 42 PGADGIDGDKGSPGAPGSPGAKGE-PGAPGPDGPPGKPGLDGLTGAKGSRGPWGGQ 96
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 27.3 bits (59), Expect = 9.0 Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 7/79 (8%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAG-------EEQRRGAVVSSGHP 125 PGG R RGG G GA G R G R G + G P Sbjct: 262 PGGARPSTSSRSGGGRGRGGGGGAGPRGGGAGGGAPRTGFGGRPGGGRGRGGTAGAFGRP 321 Query: 124 GGRPDRVLVSPVHRLEPRK 68 GGRP R S R + K Sbjct: 322 GGRPSRSRKSKKQRRQELK 340
>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800| Length = 1258 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/77 (24%), Positives = 32/77 (41%) Frame = +2 Query: 113 WAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXX 292 WA +P A +L +GS D+TV+ W S GH + + Sbjct: 938 WA---LPVAFSPDRQILASGSNDKTVKLWDWQTGKYIS-SLEGHTDFIYGIAFSPDSQTL 993 Query: 293 XXVSIDSHIRVFDVDSG 343 S DS +R++++ +G Sbjct: 994 ASASTDSSVRLWNISTG 1010
>RESIL_DROME (Q9V7U0) Pro-resilin precursor| Length = 620 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Frame = -2 Query: 283 PGGMRSEGDHSERV---PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 113 PGG + G RV GG+DG G G R G + SSG PGGRP Sbjct: 524 PGGNGNGGSDGGRVIIGGRVIGGQDGGDQGYSGG-----RPGGQDLGRDGYSSGRPGGRP 578
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Frame = -2 Query: 277 GMRSEGDHSERVPPC--RGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 G+ GD PC R DG + G A+G R G AV G PG P R Sbjct: 1652 GVDLSGDSQVSSGPCSQRSSPDGGLKG--AAEGPPKRPGGSSPLNAVPCEGPPGSEPPR 1708
>DPY5_CAEEL (P91285) Cuticle collagen dpy-5 (Protein dumpy-5)| Length = 284 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -2 Query: 235 CRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 C G G+ GLPG +G G+ +RG G PG Sbjct: 140 CPAGPPGQD-GLPGQEGFQGLPGDAGKRGTPGKDGEPG 176
>PPK_MYCTU (P65768) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 742 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2 Query: 194 AWQPDDLAVASPPA 235 AW PDD A+A+PPA Sbjct: 25 AWYPDDSALAAPPA 38
>PPK_MYCBO (P65769) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 742 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2 Query: 194 AWQPDDLAVASPPA 235 AW PDD A+A+PPA Sbjct: 25 AWYPDDSALAAPPA 38
>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi| complex-associated protein of 170 kDa) (GCP170) Length = 1498 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +2 Query: 173 SIDETVRAWQPDDLAVASP-PAGGHA 247 ++ E++ +W P + A ASP P GGHA Sbjct: 1452 TVHESLSSWTPLEPATASPVPPGGHA 1477
>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein| 5) Length = 573 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 98 HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 202 HED + + A+ P LLLT S D T++AW+ Sbjct: 512 HEDVVNSVAFSPQEQE----LLLTASDDATIKAWR 542
>FBXW2_HUMAN (Q9UKT8) F-box/WD-repeat protein 2 (F-box and WD-40 domain protein| 2) (MD6 protein) Length = 454 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +2 Query: 161 LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 340 L+TGS D TV W+ + GH V S+ S D ++V+ + + Sbjct: 199 LVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSA 257 Query: 341 GASVTTL 361 G + TL Sbjct: 258 GTCLNTL 264
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 265 EGDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 107 +GD PP G GE + G PG GL GE +GA+ +G G + R Sbjct: 697 KGDKGPVGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPR 754
>ADIPO_MOUSE (Q60994) Adiponectin precursor (Adipocyte, C1q and collagen| domain-containing protein) (30 kDa adipocyte complement-related protein) (ACRP30) (Adipocyte-specific protein AdipoQ) Length = 247 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = -2 Query: 244 VPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSP 92 VPP +G G + G+PG G G + R G + G G + D L+ P Sbjct: 32 VPPPKGTCAGWMAGIPGHPGHNGTPGRDGRDG---TPGEKGEKGDAGLLGP 79
>PKH3_ASHGO (Q753D9) Serine/threonine-protein kinase PKH3 (EC 2.7.11.1)| Length = 726 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +2 Query: 2 GLSSQIKHLGFRLRERREGTMKLAGFKSVDGAHEDSIWAAAWVPAADHRP 151 GL S+I L R E K F VD +++ IW +W A++ P Sbjct: 246 GLVSKILVLDPSQRYTLEQIKKHKWFSGVDWNNKEKIWRGSWTIASESTP 295
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -3 Query: 252 PSACPPAGGDATARSSGCQARTVSSI--EPVRSSAVGRWSAAGTQAAAQIESS*APST 85 PSA G ATA + + VS + ++A+ SAA AAA +S P T Sbjct: 2631 PSAAATGAGSATAAAIASDQQQVSKVAAAAAAAAALSNASAAAAAAAAAAAASVGPPT 2688
>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQ 202 H+ ++TGS+D+TV+ W+ Sbjct: 388 HKTAPYVVTGSVDQTVKVWE 407
>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQ 202 H+ ++TGS+D+TV+ W+ Sbjct: 388 HKTAPYVVTGSVDQTVKVWE 407
>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQ 202 H+ ++TGS+D+TV+ W+ Sbjct: 388 HKTAPYVVTGSVDQTVKVWE 407
>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQ 202 H+ ++TGS+D+TV+ W+ Sbjct: 388 HKTAPYVVTGSVDQTVKVWE 407
>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha| subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha) (Lissencephaly-1 protein) (LIS-1) Length = 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQ 202 H+ ++TGS+D+TV+ W+ Sbjct: 388 HKTAPYVVTGSVDQTVKVWE 407
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Frame = -2 Query: 283 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 110 PG +G + P +GG G PG G AG + GA + G PG G+ Sbjct: 147 PGQPGPKGPNGNPGAPAQGGGQGP----PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRG 202 Query: 109 RVLVSP 92 R L P Sbjct: 203 RGLPGP 208
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 intergenic| region Length = 1140 Score = 27.3 bits (59), Expect = 9.0 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 8/126 (6%) Frame = -3 Query: 384 QTSEGAASSVVTEAPESTSKTRMWLSMETXXXXXXXXXXARETTPSACPPAGGDATARSS 205 + +SSV +EAP STS + +S E +T S+ + ++A SS Sbjct: 383 EAPSSTSSSVSSEAPSSTSSS---VSSEAPSSTSSSVSSEISSTKSSV-MSSEVSSATSS 438 Query: 204 GCQARTVSSIEPVRSSAVGRWSAAGTQA--------AAQIESS*APSTDLNPASFIVPSL 49 + S+I + SS + +S+ T A+ + SS PS++ ++ I+ S Sbjct: 439 LVSSEAPSAISSLASSRL--FSSKNTSVTSTLVATEASSVTSSLRPSSETLASNSIIESS 496 Query: 48 LSRKRN 31 LS N Sbjct: 497 LSTGYN 502
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 27.3 bits (59), Expect = 9.0 Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = -3 Query: 384 QTSEGAASSVVTEAP--ESTSKTRMWLSMETXXXXXXXXXXARETTPSACPPAGGDATAR 211 ++SE A++V T + STS T + T + ++ ++ + ++ Sbjct: 177 KSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSSTTSSSTSSTTSSTTSSTTSSTT 236 Query: 210 SSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTDL---NPASFIVP 55 SS + T S+ SS +S + ++ + SS + D +P+S +VP Sbjct: 237 SSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSITLSSSEHTTVDSRTSSPSSTLVP 291
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 13/62 (20%) Frame = -2 Query: 214 EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG-----------GRPDRVLVS--PVHRLEP 74 E+VG PG DGL G RG +G PG G P +L P+ RL Sbjct: 820 ELVGPPGPDGLPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLERLMG 879 Query: 73 RK 68 +K Sbjct: 880 KK 881
>YQEF_ECOLI (Q46939) Probable acetyl-CoA acetyltransferase (EC 2.3.1.9)| (Acetoacetyl-CoA thiolase) Length = 393 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 151 GAVVSSGHP-GGRPDRVLVSPVHRLEPRKLHRTLSSL 44 G ++ GHP G R+LVS VH + R + L++L Sbjct: 341 GGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATL 377
>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) Length = 643 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/73 (23%), Positives = 30/73 (41%) Frame = +2 Query: 143 HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 322 H +A +LTGS D+T R W + GH V ++ + I Sbjct: 472 HPNSAYVLTGSSDKTCRLWDV-HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530 Query: 323 VFDVDSGASVTTL 361 ++D+ +G + T+ Sbjct: 531 LWDIGTGRRIKTM 543
>MSI5_ARATH (Q9SU78) WD-40 repeat protein MSI5| Length = 487 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +2 Query: 86 VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDL---AVASP 229 V+ AH+ + W P ++ L+LTGS D TVR + +L V SP Sbjct: 312 VEKAHDADLHCVDWNPHDNN----LILTGSADNTVRVFDRRNLTSNGVGSP 358
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Frame = -2 Query: 277 GMRSE----GDHSERVPPCRGGRDGE----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 122 G+R E GD R PP G G I G PGA G+ G + G G PG Sbjct: 141 GLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPG 200 Query: 121 GR 116 R Sbjct: 201 DR 202 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,292,187 Number of Sequences: 219361 Number of extensions: 781243 Number of successful extensions: 4701 Number of sequences better than 10.0: 246 Number of HSP's better than 10.0 without gapping: 3401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4579 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
