ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
3dbj|AK109657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
5emb|AM261084.1| Oryza sativa (indica cultivar-group) mRNA for pu... 107 3e-20
6gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.085
7gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.3
8gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.3
9gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.3
10gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.3
11emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
12emb|AJ457205.1|UBA457205 Uncultured bacterium partial nirS gene ... 42 1.3
13emb|AJ457199.1|UBA457199 Uncultured bacterium partial nirS gene ... 42 1.3
14emb|AJ457195.1|UBA457195 Uncultured bacterium partial nirS gene ... 42 1.3
15gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.3
16gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.3
17ref|NM_210976.1| Eremothecium gossypii AFR075Cp (AFR075C), mRNA 42 1.3
18emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.3
19gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.3
20gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 5.2
21ref|XM_748377.1| Aspergillus fumigatus Af293 cytoplasmic dynein ... 40 5.2
22gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.2
23emb|AL355362.7| Human DNA sequence from clone RP3-480M22 on chro... 40 5.2
24emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 5.2
25gb|AE011635.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.2
26gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.2
27gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.2
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.2
29dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.2
30emb|AL844552.4| Mouse DNA sequence from clone RP23-265N10 on chr... 40 5.2 
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05,
              complete sequence
          Length = 162223

 Score =  145 bits (73), Expect = 1e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                          
Query: 61     gatgaagcttgcggggttcaagtcggtggacggggctcacgaggactcgatctgggcggc 120
              ||||||||| |||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 123583 gatgaagctcgcggggctcaagtcggtggacggggcccacgaggagtccatctgggcggc 123642

                                                                          
Query: 121    cgcctgggtgcccgctgctgaccaccgccccacggcgctgctcctcaccggctcgatcga 180
               || ||||||||||| || |||||||||||| ||||||||||||| || ||| |  ||||
Sbjct: 123643 ggcgtgggtgcccgcggcggaccaccgccccgcggcgctgctcctgacgggcgccctcga 123702

                           
Query: 181    cgagaccgtccgc 193
              |||||||||||||
Sbjct: 123703 cgagaccgtccgc 123715



 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                          
Query: 237    gggggcacgcgctcggagtggtctccctcgctgcgcatcccgccggggtcatagccgccg 296
              |||| ||||||||||| ||||| || ||||| || || ||||| || | | | |||||||
Sbjct: 123762 ggggccacgcgctcggggtggtgtcgctcgccgcccaccccgcgggcgccgtcgccgccg 123821

                                                                          
Query: 297    cggtctccatcgacagccacatccgcgtcttcgacgtcgactccggcgcctccgtcacca 356
              | |||||| |||||||| || ||||||||||||| || ||||| ||| |||||||| |||
Sbjct: 123822 ccgtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccgtcgcca 123881

                                              
Query: 357    cgctcgatgccgcgccctccgaggtctggggc 388
              ||||||| ||| | ||||||||||||||||||
Sbjct: 123882 cgctcgaggcccctccctccgaggtctggggc 123913
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  145 bits (73), Expect = 1e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                            
Query: 61       gatgaagcttgcggggttcaagtcggtggacggggctcacgaggactcgatctgggcggc 120
                ||||||||| |||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 25633536 gatgaagctcgcggggctcaagtcggtggacggggcccacgaggagtccatctgggcggc 25633595

                                                                            
Query: 121      cgcctgggtgcccgctgctgaccaccgccccacggcgctgctcctcaccggctcgatcga 180
                 || ||||||||||| || |||||||||||| ||||||||||||| || ||| |  ||||
Sbjct: 25633596 ggcgtgggtgcccgcggcggaccaccgccccgcggcgctgctcctgacgggcgccctcga 25633655

                             
Query: 181      cgagaccgtccgc 193
                |||||||||||||
Sbjct: 25633656 cgagaccgtccgc 25633668



 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 237      gggggcacgcgctcggagtggtctccctcgctgcgcatcccgccggggtcatagccgccg 296
                |||| ||||||||||| ||||| || ||||| || || ||||| || | | | |||||||
Sbjct: 25633715 ggggccacgcgctcggggtggtgtcgctcgccgcccaccccgcgggcgccgtcgccgccg 25633774

                                                                            
Query: 297      cggtctccatcgacagccacatccgcgtcttcgacgtcgactccggcgcctccgtcacca 356
                | |||||| |||||||| || ||||||||||||| || ||||| ||| |||||||| |||
Sbjct: 25633775 ccgtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccgtcgcca 25633834

                                                
Query: 357      cgctcgatgccgcgccctccgaggtctggggc 388
                ||||||| ||| | ||||||||||||||||||
Sbjct: 25633835 cgctcgaggcccctccctccgaggtctggggc 25633866
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>dbj|AK109657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F06, full
           insert sequence
          Length = 1206

 Score =  145 bits (73), Expect = 1e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatgaagcttgcggggttcaagtcggtggacggggctcacgaggactcgatctgggcggc 120
           ||||||||| |||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 110 gatgaagctcgcggggctcaagtcggtggacggggcccacgaggagtccatctgggcggc 169

                                                                       
Query: 121 cgcctgggtgcccgctgctgaccaccgccccacggcgctgctcctcaccggctcgatcga 180
            || ||||||||||| || |||||||||||| ||||||||||||| || ||| |  ||||
Sbjct: 170 ggcgtgggtgcccgcggcggaccaccgccccgcggcgctgctcctgacgggcgccctcga 229

                        
Query: 181 cgagaccgtccgc 193
           |||||||||||||
Sbjct: 230 cgagaccgtccgc 242



 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 237 gggggcacgcgctcggagtggtctccctcgctgcgcatcccgccggggtcatagccgccg 296
           |||| ||||||||||| ||||| || ||||| || || ||||| || | | | |||||||
Sbjct: 289 ggggccacgcgctcggggtggtgtcgctcgccgcccaccccgcgggcgccgtcgccgccg 348

                                                                       
Query: 297 cggtctccatcgacagccacatccgcgtcttcgacgtcgactccggcgcctccgtcacca 356
           | |||||| |||||||| || ||||||||||||| || ||||| ||| |||||||| |||
Sbjct: 349 ccgtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccgtcgcca 408

                                           
Query: 357 cgctcgatgccgcgccctccgaggtctggggc 388
           ||||||| ||| | ||||||||||||||||||
Sbjct: 409 cgctcgaggcccctccctccgaggtctggggc 440
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  145 bits (73), Expect = 1e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                            
Query: 61       gatgaagcttgcggggttcaagtcggtggacggggctcacgaggactcgatctgggcggc 120
                ||||||||| |||||| ||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 25952206 gatgaagctcgcggggctcaagtcggtggacggggcccacgaggagtccatctgggcggc 25952265

                                                                            
Query: 121      cgcctgggtgcccgctgctgaccaccgccccacggcgctgctcctcaccggctcgatcga 180
                 || ||||||||||| || |||||||||||| ||||||||||||| || ||| |  ||||
Sbjct: 25952266 ggcgtgggtgcccgcggcggaccaccgccccgcggcgctgctcctgacgggcgccctcga 25952325

                             
Query: 181      cgagaccgtccgc 193
                |||||||||||||
Sbjct: 25952326 cgagaccgtccgc 25952338



 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 237      gggggcacgcgctcggagtggtctccctcgctgcgcatcccgccggggtcatagccgccg 296
                |||| ||||||||||| ||||| || ||||| || || ||||| || | | | |||||||
Sbjct: 25952385 ggggccacgcgctcggggtggtgtcgctcgccgcccaccccgcgggcgccgtcgccgccg 25952444

                                                                            
Query: 297      cggtctccatcgacagccacatccgcgtcttcgacgtcgactccggcgcctccgtcacca 356
                | |||||| |||||||| || ||||||||||||| || ||||| ||| |||||||| |||
Sbjct: 25952445 ccgtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccgtcgcca 25952504

                                                
Query: 357      cgctcgatgccgcgccctccgaggtctggggc 388
                ||||||| ||| | ||||||||||||||||||
Sbjct: 25952505 cgctcgaggcccctccctccgaggtctggggc 25952536
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>emb|AM261084.1| Oryza sativa (indica cultivar-group) mRNA for putative meiotic
           recombination protein REC14 (rec14 gene), clone 14-2
          Length = 1077

 Score =  107 bits (54), Expect = 3e-20
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                       
Query: 291 ccgccgcggtctccatcgacagccacatccgcgtcttcgacgtcgactccggcgcctccg 350
           ||||||| |||||| |||||||| || ||||||||||||| || ||||| ||| ||||||
Sbjct: 195 ccgccgccgtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccg 254

                                                 
Query: 351 tcaccacgctcgatgccgcgccctccgaggtctggggc 388
           || |||||||||| ||| ||||||||||||||||||||
Sbjct: 255 tcgccacgctcgaggccccgccctccgaggtctggggc 292



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 61  gatgaagcttgcggggttcaagtcggtggacggggctcacgag 103
           ||||||||| |||||  ||||||||||||||||||| ||||||
Sbjct: 118 gatgaagctcgcgggactcaagtcggtggacggggcccacgag 160
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 199     gcagcccgacgatctcgccgtcg 221
               |||||||||||||||||||||||
Sbjct: 3402805 gcagcccgacgatctcgccgtcg 3402827



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 204     ccgacgatctcgccgtcgcg 223
               ||||||||||||||||||||
Sbjct: 2322747 ccgacgatctcgccgtcgcg 2322766
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||||||||||||||||| |||||
Sbjct: 1086135 gcagcccgacgatctcgccttcgcg 1086111
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||||||||||||||||| |||||
Sbjct: 2829963 gcagcccgacgatctcgccctcgcg 2829987
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 199    gcagcccgacgatctcgccgtcgcg 223
              ||||||||||||||||||| |||||
Sbjct: 786443 gcagcccgacgatctcgccttcgcg 786419
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||| |||||||||||||||||||
Sbjct: 3907961 gcagcgcgacgatctcgccgtcgcg 3907985



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||||||||||||||||| |||||
Sbjct: 1306574 gcagcccgacgatctcgccttcgcg 1306550
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||| |||||||||||||||||||
Sbjct: 3649773 gcagcgcgacgatctcgccgtcgcg 3649797



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||||||||||||||||| |||||
Sbjct: 1210680 gcagcccgacgatctcgccttcgcg 1210656
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>emb|AJ457205.1|UBA457205 Uncultured bacterium partial nirS gene for putative nitrite
           reductase, clone BS1295
          Length = 839

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 351 tcaccacgctcgatgccgcgc 371
           |||||||||||||||||||||
Sbjct: 202 tcaccacgctcgatgccgcgc 222
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>emb|AJ457199.1|UBA457199 Uncultured bacterium partial nirS gene for putative nitrite
           reductase, clone BS1282
          Length = 839

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 351 tcaccacgctcgatgccgcgc 371
           |||||||||||||||||||||
Sbjct: 202 tcaccacgctcgatgccgcgc 222
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>emb|AJ457195.1|UBA457195 Uncultured bacterium partial nirS gene for putative nitrite
           reductase, clone BS1266
          Length = 839

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 351 tcaccacgctcgatgccgcgc 371
           |||||||||||||||||||||
Sbjct: 202 tcaccacgctcgatgccgcgc 222
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 337    ctccggcgcctccgtcaccac 357
              |||||||||||||||||||||
Sbjct: 563307 ctccggcgcctccgtcaccac 563327
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 199    gcagcccgacgatctcgccgtcgcg 223
              ||||| |||||||||||||||||||
Sbjct: 534112 gcagcgcgacgatctcgccgtcgcg 534088
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>ref|NM_210976.1| Eremothecium gossypii AFR075Cp (AFR075C), mRNA
          Length = 2223

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 337 ctccggcgcctccgtcaccac 357
           |||||||||||||||||||||
Sbjct: 438 ctccggcgcctccgtcaccac 418
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 348    ccgtcaccacgctcgatgccg 368
              |||||||||||||||||||||
Sbjct: 980921 ccgtcaccacgctcgatgccg 980941
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     gcagcccgacgatctcgccgtcgcg 223
               ||||| |||||||||||||||||||
Sbjct: 3354102 gcagcgcgacgatctcgccgtcgcg 3354126
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     tcctcaccggctcgatcgac 181
               ||||||||||||||||||||
Sbjct: 1374533 tcctcaccggctcgatcgac 1374514
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>ref|XM_748377.1| Aspergillus fumigatus Af293 cytoplasmic dynein heavy chain
           (Afu5g11810) partial mRNA
          Length = 13107

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 gcggtctccatcgacagcca 315
           ||||||||||||||||||||
Sbjct: 986 gcggtctccatcgacagcca 967
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     ccgacgatctcgccgtcgcg 223
               ||||||||||||||||||||
Sbjct: 3712008 ccgacgatctcgccgtcgcg 3711989
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>emb|AL355362.7| Human DNA sequence from clone RP3-480M22 on chromosome 6 Contains the
             5' end of the gene for p53-induced protein PIGPC1 (PERP)
             and a CpG island, complete sequence
          Length = 23812

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   ctgctgaccaccgccccacg 154
             ||||||||||||||||||||
Sbjct: 12434 ctgctgaccaccgccccacg 12415
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   cccgacgatctcgccgtcgc 222
             ||||||||||||||||||||
Sbjct: 90842 cccgacgatctcgccgtcgc 90861
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>gb|AE011635.1| Xanthomonas axonopodis pv. citri str. 306,  section 13 of 469 of the
            complete genome
          Length = 11848

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  cctcaccggctcgatcgacg 182
            ||||||||||||||||||||
Sbjct: 2162 cctcaccggctcgatcgacg 2143
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     gcagcccgacgatctcgccg 218
               ||||||||||||||||||||
Sbjct: 1224228 gcagcccgacgatctcgccg 1224247
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 200     cagcccgacgatctcgccgtcgcg 223
               ||||||||||||||||||| ||||
Sbjct: 1768067 cagcccgacgatctcgccggcgcg 1768044
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 112     ctgggcggccgcctgggtgcccgc 135
               |||||||||| |||||||||||||
Sbjct: 4229828 ctgggcggccccctgggtgcccgc 4229851
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     cggcgctgctcctcaccggc 172
               ||||||||||||||||||||
Sbjct: 2672309 cggcgctgctcctcaccggc 2672290
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>emb|AL844552.4| Mouse DNA sequence from clone RP23-265N10 on chromosome 2, complete
             sequence
          Length = 77710

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    cagccagatcaaacacctag 29
             ||||||||||||||||||||
Sbjct: 61182 cagccagatcaaacacctag 61201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,042,890
Number of Sequences: 3902068
Number of extensions: 2042890
Number of successful extensions: 51235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49702
Number of HSP's gapped (non-prelim): 1533
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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