ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast61a04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB193552.1| Triticum aestivum WLIP19 mRNA for bZIP transcription factor, complete cds Length = 676 Score = 210 bits (106), Expect = 3e-51 Identities = 133/141 (94%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 315 tcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactcctcgc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactcctcgc 60 Query: 375 ccctcgagaacgccgcatccatccagaccctctagttgattagatccagcctcgtttatt 434 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 61 cccccgacaacgccgcatccatccag--cctctagttgattagatccagcctcgtttctt 118 Query: 435 ccaccttcttttcttcttcct 455 |||| ||||| ||||||||| Sbjct: 119 ccactttcttgccttcttcct 139
>dbj|D26563.1|MZEMLIP15 Maize mRNA for mLIP15 (DNA-binding factor), complete cds Length = 1179 Score = 115 bits (58), Expect = 1e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 300 gccgctcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaacgc 359 Query: 370 ctcgcccctc 379 ||||||||| Sbjct: 360 atcgcccctc 369
>dbj|D63956.1| Zea mays gmlip15 gene, complete cds Length = 3794 Score = 115 bits (58), Expect = 1e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 2572 gccgctcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaacgc 2631 Query: 370 ctcgcccctc 379 ||||||||| Sbjct: 2632 atcgcccctc 2641
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109799 gccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactc 109858 Query: 370 ctcgcc 375 ||||| Sbjct: 109859 atcgcc 109864 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 109495 cttatgcattagagcccccggagt 109518
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1657639 gccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactc 1657698 Query: 370 ctcgcc 375 ||||| Sbjct: 1657699 atcgcc 1657704 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 1657335 cttatgcattagagcccccggagt 1657358
>dbj|AK105138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F02, full insert sequence Length = 1182 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 329 gccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactc 388 Query: 370 ctcgcc 375 ||||| Sbjct: 389 atcgcc 394 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 25 cttatgcattagagcccccggagt 48
>dbj|AK104844.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G08, full insert sequence Length = 1344 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 319 gccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactc 378 Query: 370 ctcgcc 375 ||||| Sbjct: 379 atcgcc 384 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 15 cttatgcattagagcccccggagt 38
>dbj|AK065180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D17, full insert sequence Length = 1375 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 310 gccgctcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactc 369 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 330 gccgttcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactc 389 Query: 370 ctcgcc 375 ||||| Sbjct: 390 atcgcc 395 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 26 cttatgcattagagcccccggagt 49
>emb|X57325.1|OSLIP19 Rice lip19 mRNA for basic/leucine zipper protein Length = 1324 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 315 tcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactcctcgc 374 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 296 tcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactcatcgc 355 Query: 375 c 375 | Sbjct: 356 c 356
>dbj|D63955.1| Oryza sativa glip19 gene, complete cds Length = 3139 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 315 tcccactccttctccgtcgccttcctctactggttctacgacttctcatgaactcctcgc 374 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1992 tcccactccttctccgtcgccttcctctactggttctacgtcttctcatgaactcatcgc 2051 Query: 375 c 375 | Sbjct: 2052 c 2052 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cttatgcattagagcccccggagt 42 |||||||||||||||||||||||| Sbjct: 1684 cttatgcattagagcccccggagt 1707
>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239, complete sequence Length = 106506 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 318 cactccttctccgtcgccttcctctactggttctacgacttctcatgaactcc 370 |||||||||||||| || ||||||||||||||||||| ||||||||||||||| Sbjct: 49853 cactccttctccgttgcattcctctactggttctacgtcttctcatgaactcc 49905
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctcat 363 ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 20030181 tccttctccgtcgtcttcctctactggttctacgtcttctcat 20030223 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ccttcctctactggttctac 353 |||||||||||||||||||| Sbjct: 19984753 ccttcctctactggttctac 19984772
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctcat 363 ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 133090 tccttctccgtcgtcttcctctactggttctacgtcttctcat 133132 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ccttcctctactggttctac 353 |||||||||||||||||||| Sbjct: 87662 ccttcctctactggttctac 87681
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctcat 363 ||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 28143 tccttctccgtcgtcttcctctactggttctacgtcttctcat 28185
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcat 363 |||||||||| |||||||||||||||||| | |||||||| Sbjct: 1696689 ttctccgtcgtcttcctctactggttctatgtcttctcat 1696650
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcat 363 |||||||||| |||||||||||||||||| | |||||||| Sbjct: 14701 ttctccgtcgtcttcctctactggttctatgtcttctcat 14662
>dbj|AK070887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O22, full insert sequence Length = 1506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcat 363 |||||||||| |||||||||||||||||| | |||||||| Sbjct: 457 ttctccgtcgtcttcctctactggttctatgtcttctcat 496
>gb|AY112511.1| Zea mays CL1909_-1 mRNA sequence Length = 1179 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 344 ctggttctacgacttctcatgaactcctcgcccctc 379 ||||||||||| |||||||||||| | ||||||||| Sbjct: 334 ctggttctacgtcttctcatgaacgcatcgcccctc 369
>ref|NM_127373.2| Arabidopsis thaliana GBF5; DNA binding / transcription factor AT2G18160 (GBF5) mRNA, complete cds Length = 1231 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 |||||||||| ||||||||||||||| ||| || | ||||||| Sbjct: 285 ttctccgtcgtcttcctctactggttttacaacgtttcatgaa 327
>gb|AY577781.1| Mus musculus osteoprotegrin (Opg) gene, promoter region Length = 3283 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcccc 460 ||||||||||||||||||||||| Sbjct: 3204 ccttcttttcttcttccttcccc 3226
>gb|AY390558.1| Mus musculus osteoprotegerin (Opg) gene, promoter region Length = 1487 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcccc 460 ||||||||||||||||||||||| Sbjct: 1408 ccttcttttcttcttccttcccc 1430
>gb|BT000700.1| Arabidopsis thaliana clone RAFL08-13-K01 (R11176) putative bZIP transcription factor (At2g18160) mRNA, complete cds Length = 1120 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 |||||||||| ||||||||||||||| ||| || | ||||||| Sbjct: 196 ttctccgtcgtcttcctctactggttttacaacgtttcatgaa 238
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence Length = 120704 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 ||||||||||| || || ||||||||||||| |||||||||| Sbjct: 43885 ttctccgtcgcgtttctttactggttctacgttttctcatgaa 43843
>gb|AC007212.7| Arabidopsis thaliana chromosome 2 clone F8D23 map PhyB, complete sequence Length = 57550 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 |||||||||| ||||||||||||||| ||| || | ||||||| Sbjct: 29055 ttctccgtcgtcttcctctactggttttacaacgtttcatgaa 29097
>gb|AY037216.1| Arabidopsis thaliana At2g18160/F8D23.6 mRNA, complete cds Length = 882 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 |||||||||| ||||||||||||||| ||| || | ||||||| Sbjct: 192 ttctccgtcgtcttcctctactggttttacaacgtttcatgaa 234
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctca 362 |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 16365308 ttctccgtcgtcttcctttactggttctatgtcttctca 16365346
>emb|BX842044.1|CNS09Y87 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1159 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaa 366 |||||||||| ||||||||||||||| ||| || | ||||||| Sbjct: 271 ttctccgtcgtcttcctctactggttttacaacgtttcatgaa 313
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctca 362 |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 71160 ttctccgtcgtcttcctttactggttctatgtcttctca 71198
>dbj|AK100580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105M12, full insert sequence Length = 2210 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctca 362 |||||||||| |||||| ||||||||||| | ||||||| Sbjct: 482 ttctccgtcgtcttcctttactggttctatgtcttctca 520
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence Length = 337658 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttcccc 460 ||||||||||||||||||||||| Sbjct: 199580 ccttcttttcttcttccttcccc 199558
>dbj|AP006097.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45O19, TM0174, complete sequence Length = 75668 Score = 46.1 bits (23), Expect = 0.10 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 336 ttcctctactggttctacgacttctcatgaactcc 370 ||||||||| ||||||||| ||||||||||||||| Sbjct: 19888 ttcctctac-ggttctacgtcttctcatgaactcc 19921
>emb|AJ459268.1|MMU459268 Mus musculus OPG gene, promoter region Length = 2031 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcccc 460 ||||||||||||||||||||||| Sbjct: 1715 ccttcttttcttcttccttcccc 1737
>gb|DQ073569.1| Craterostigma plantagineum bZIP2 protein mRNA, complete cds Length = 1054 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggttctacg 354 |||||||||||| || | |||||| ||||||||||||| Sbjct: 183 ccactccttctcagtagtcttcctatactggttctacg 220
>emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on chromosome 13 Contains part of a novel gene (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253) and a novel gene, complete sequence Length = 170276 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 ttccaccttcttttcttcttccttcc 458 |||| ||||||||||||||||||||| Sbjct: 80533 ttcctccttcttttcttcttccttcc 80558
>emb|Y13676.1|AMY13676 Antirrhinum majus mRNA for bZIP DNA-binding protein, 1080 bp Length = 1080 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggttctacg 354 ||||||||||||||| | ||||| ||||||||||||| Sbjct: 190 ccactccttctccgttgttttcctttactggttctacg 227
>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence Length = 191096 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 ttccaccttcttttcttcttccttcc 458 |||| ||||||||||||||||||||| Sbjct: 127747 ttcctccttcttttcttcttccttcc 127722
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctca 362 |||||||| || | |||||||||||||||||| | ||||||| Sbjct: 7817961 tccttctctgttgtcttcctctactggttctatgtcttctca 7818002
>gb|AF053939.1|AF053939 Arabidopsis thaliana transcription factor GBF5 (GBF5) mRNA, complete cds Length = 1246 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggtt 349 |||||||||| ||||||||||||||| Sbjct: 283 ttctccgtcgtcttcctctactggtt 308
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 ccagcctcagctccttggtcct 201 |||||||||||||||||||||| Sbjct: 80101 ccagcctcagctccttggtcct 80122
>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0064I23 Length = 161865 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctca 362 |||||||| || | |||||||||||||||||| | ||||||| Sbjct: 65164 tccttctctgttgtcttcctctactggttctatgtcttctca 65205
>dbj|AK098869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A19, full insert sequence Length = 1622 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctca 362 |||||||| || | |||||||||||||||||| | ||||||| Sbjct: 562 tccttctctgttgtcttcctctactggttctatgtcttctca 603
>dbj|AK072360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058F04, full insert sequence Length = 1366 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctca 362 |||||||| || | |||||||||||||||||| | ||||||| Sbjct: 562 tccttctctgttgtcttcctctactggttctatgtcttctca 603
>dbj|AK064903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L18, full insert sequence Length = 1647 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 321 tccttctccgtcgccttcctctactggttctacgacttctca 362 |||||||| || | |||||||||||||||||| | ||||||| Sbjct: 562 tccttctctgttgtcttcctctactggttctatgtcttctca 603
>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete sequence Length = 162556 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 tccaccttcttttcttcttcct 455 |||||||||||||||||||||| Sbjct: 10346 tccaccttcttttcttcttcct 10367
>ref|NM_106193.3| Arabidopsis thaliana DNA binding / transcription factor AT1G75390 mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttcta 352 |||||||||| ||| |||||||||||||| Sbjct: 275 ttctccgtcgtctttctctactggttcta 303
>gb|BT018824.1| Zea mays clone EL01N0532F03.d mRNA sequence Length = 1409 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 352 ccactccttctcggttgtcttcctctactggtt 384
>gb|AC141893.4| Mus musculus BAC clone RP23-324F17 from chromosome 15, complete sequence Length = 182603 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 138090 ccttcttttcttcttccttcc 138110
>gb|AC162802.4| Mus musculus BAC clone RP23-363M4 from chromosome 5, complete sequence Length = 234206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 ttcttttcttcttccttcccc 460 ||||||||||||||||||||| Sbjct: 127426 ttcttttcttcttccttcccc 127406
>gb|AC155317.5| Mus musculus BAC clone RP23-89D6 from chromosome 15, complete sequence Length = 251377 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 142558 ccttcttttcttcttccttcc 142538
>emb|AL662838.12| Mouse DNA sequence from clone RP23-378I13 on chromosome 11 Contains the 3' end of the Mbtd1 gene for mbt domain containing 1, the Nme2 gene for expressed in non-metastatic cells 2 protein, the Nme1 gene for expressed in non-metastatic cells 1 protein, the Spag9 gene for sperm associated antigen 9 and a ribosomal protein L27 (Rpl27) pseudogene, complete sequence Length = 215435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctctttccttagagtctgctc 130 ||||||||||||||||||||| Sbjct: 57314 ctctttccttagagtctgctc 57294
>emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chromosome 4, complete sequence Length = 117872 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gctttctcccttccccttctt 88 ||||||||||||||||||||| Sbjct: 43489 gctttctcccttccccttctt 43469
>gb|AC087468.11| Homo sapiens chromosome 15, clone RP11-255M6, complete sequence Length = 168693 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttccc 459 ||||||||||||||||||||| Sbjct: 86124 cttcttttcttcttccttccc 86144
>gb|AC093310.3| Homo sapiens chromosome 5 clone RP11-9C14, complete sequence Length = 65874 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 ttcttttcttcttccttcccc 460 ||||||||||||||||||||| Sbjct: 38902 ttcttttcttcttccttcccc 38922
>gb|AC018781.9| Homo sapiens chromosome 8, clone RP11-302J23, complete sequence Length = 190984 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tcctgctttctcccttccccttctt 88 ||||||||| ||||||||||||||| Sbjct: 149633 tcctgctttgtcccttccccttctt 149609
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 82489 ccttcttttcttcttccttcc 82469
>dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mRNA for bZIP protein, complete cds Length = 1277 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 326 ccactccttctcggttgtcttcctctactggtt 358
>gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosome 10, complete sequence Length = 210757 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tttctcccttccccttcttac 90 ||||||||||||||||||||| Sbjct: 72306 tttctcccttccccttcttac 72286
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 23001352 ccactccttctcggttgtcttcctctactggtt 23001384
>emb|BX815820.1|CNS0ABSC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1153 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttcta 352 |||||||||| ||| |||||||||||||| Sbjct: 248 ttctccgtcgtctttctctactggttcta 276
>emb|BX814655.1|CNS0AC7E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1109 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttcta 352 |||||||||| ||| |||||||||||||| Sbjct: 249 ttctccgtcgtctttctctactggttcta 277
>emb|BX816047.1|CNS0ABWH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1166 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttcta 352 |||||||||| ||| |||||||||||||| Sbjct: 253 ttctccgtcgtctttctctactggttcta 281
>gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 13, complete sequence Length = 215256 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttccc 459 ||||||||||||||||||||| Sbjct: 212116 cttcttttcttcttccttccc 212096
>gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosome 13, complete sequence Length = 214193 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttccc 459 ||||||||||||||||||||| Sbjct: 152647 cttcttttcttcttccttccc 152667
>gb|BC076532.1| Danio rerio adenosine deaminase, mRNA (cDNA clone MGC:92028 IMAGE:7044437), complete cds Length = 2340 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tgcagctaagtcctgctttct 74 ||||||||||||||||||||| Sbjct: 1093 tgcagctaagtcctgctttct 1113
>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence, complete sequence Length = 100685 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 324 ttctccgtcgccttcctctactggttcta 352 |||||||||| ||| |||||||||||||| Sbjct: 69769 ttctccgtcgtctttctctactggttcta 69741
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 76521 ccttcttttcttcttccttcc 76541
>emb|X62745.1|ZMOCSBFA Z.mays OBF1 mRNA for ocs-element binding factor 1 Length = 1457 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 425 ccactccttctcggtagtcttcctctactggtt 457
>dbj|AK071530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102N09, full insert sequence Length = 943 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 345 ccactccttctcggttgtcttcctctactggtt 377
>gb|AY103652.1| Zea mays PCO086174 mRNA sequence Length = 1583 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 520 ccactccttctcggttgtcttcctctactggtt 552
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 82489 ccttcttttcttcttccttcc 82469
>ref|NM_001002646.1| Danio rerio adenosine deaminase (ada), mRNA Length = 2340 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tgcagctaagtcctgctttct 74 ||||||||||||||||||||| Sbjct: 1093 tgcagctaagtcctgctttct 1113
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 22929543 ccactccttctcggttgtcttcctctactggtt 22929575
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 ccactccttctccgtcgccttcctctactggtt 349 |||||||||||| || | ||||||||||||||| Sbjct: 110629 ccactccttctcggttgtcttcctctactggtt 110661
>gb|AC154481.3| Mus musculus BAC clone RP23-197A2 from chromosome 12, complete sequence Length = 197101 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 cccatgtttaccttccccttcctct 272 ||||| ||||||||||||||||||| Sbjct: 179548 cccatttttaccttccccttcctct 179572
>emb|AL606924.14| Mouse DNA sequence from clone RP23-18M2 on chromosome 4, complete sequence Length = 180444 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 180326 ccttcttttcttcttccttcc 180346
>emb|AL606904.12| Mouse DNA sequence from clone RP23-182D20 on chromosome 4, complete sequence Length = 172024 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttcc 458 ||||||||||||||||||||| Sbjct: 1882 ccttcttttcttcttccttcc 1902
>gb|AC160130.2| Mus musculus BAC clone RP23-254K13 from chromosome 12, complete sequence Length = 177970 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 cccatgtttaccttccccttcctct 272 ||||| ||||||||||||||||||| Sbjct: 16495 cccatttttaccttccccttcctct 16519
>dbj|AB032478.1| Nicotiana tabacum tbzF mRNA, complete cds Length = 1099 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 324 ttctccgtcgccttcctctactggttctacgacttctcatgaact 368 |||||||| | |||||| ||||||||||||| || ||||||||| Sbjct: 126 ttctccgtagtcttcctgtactggttctacgtgttttcatgaact 170
>dbj|AP003689.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1139G1 Length = 155359 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcctgctttctcccttccccttctt 88 ||||||||| ||||||||||||||| Sbjct: 11514 tcctgctttgtcccttccccttctt 11538
>ref|NM_001036218.1| Arabidopsis thaliana unknown protein AT1G77765 transcript variant AT1G77765.2 mRNA, complete cds Length = 756 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 341 tccaccttcttttcttcttc 322
>ref|NM_148663.2| Arabidopsis thaliana unknown protein AT1G77765 transcript variant AT1G77765.1 mRNA, complete cds Length = 834 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 341 tccaccttcttttcttcttc 322
>ref|XM_522959.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 1200009I06 (LOC467564), mRNA Length = 2787 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctgctccctgttccggtcct 144 |||||||||||||||||||| Sbjct: 555 ctgctccctgttccggtcct 574
>gb|AC158155.4| Mus musculus chromosome 3, clone RP23-167L9, complete sequence Length = 205345 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 87197 cttcttttcttcttccttcc 87216 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 87006 cttcttttcttcttccttcc 87025
>ref|XM_456900.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A13563g) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 accttcttttcttcttcctt 456 |||||||||||||||||||| Sbjct: 185 accttcttttcttcttcctt 166
>gb|AY630772.1| Arabidopsis thaliana hypothetical protein (At1G77765) mRNA, complete cds, alternatively spliced Length = 866 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 341 tccaccttcttttcttcttc 322
>gb|AY630771.1| Arabidopsis thaliana hypothetical protein (At1G77765) mRNA, complete cds, alternatively spliced Length = 788 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 341 tccaccttcttttcttcttc 322
>gb|AC149234.1| Pan troglodytes chromosome X clone PTB-085L05 map human ortholog q28, complete sequence Length = 186825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctgctttctcccttcccc 83 |||||||||||||||||||| Sbjct: 14283 tcctgctttctcccttcccc 14302
>gb|AC149233.1| Pan troglodytes chromosome X clone RP43-034P07 map human ortholog q28, complete sequence Length = 169963 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctgctttctcccttcccc 83 |||||||||||||||||||| Sbjct: 121516 tcctgctttctcccttcccc 121535
>ref|XM_656296.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3784.2), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tgccgctcccactccttctccgtc 332 ||||||||||||||||||| |||| Sbjct: 278 tgccgctcccactccttctgcgtc 255
>gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, complete sequence Length = 165791 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 90715 ttcttttcttcttccttccc 90734
>gb|AY498860.1| Homo sapiens tumor necrosis factor receptor superfamily, member 8 (TNFRSF8) gene, complete cds Length = 84102 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 11337 cttcttttcttcttccttcc 11356
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 703 ccttcttttcttcttccttc 684 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 535 ccttcttttcttcttccttc 516
>gb|AC091685.4| Homo sapiens BAC clone RP11-165H4 from 7, complete sequence Length = 68299 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 30923 cttcttttcttcttccttcc 30942
>gb|AC004911.1| Homo sapiens PAC clone RP5-870F17 from 7, complete sequence Length = 155382 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 108471 ccttcttttcttcttccttc 108490
>gb|BC099572.1| Mus musculus cDNA clone IMAGE:30918524 Length = 987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 852 ccttcttttcttcttccttc 833
>emb|AL591043.11| Human DNA sequence from clone RP11-357J22 on chromosome 1 Contains a proteolipid protein 2 (colonic epithelium-enriched) (PLP2) pseudogene, a mortality factor 4 (MORF4) pseudogene and a CPG island, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 91783 ccttcttttcttcttccttc 91802
>emb|AL357835.11| Human DNA sequence from clone RP11-426M1 on chromosome 1 Contains the TNFRSF8 gene for tumor necrosis factor receptor superfamily member 8, a ribosomal protein L23a (RPL23A) pseudogene, the 5' end of the TNFRSF1B gene for tumor necrosis factor receptor superfamily member 1B and three CpG islands, complete sequence Length = 151498 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 26959 cttcttttcttcttccttcc 26978
>emb|AL157770.12| Human DNA sequence from clone RP11-490N5 on chromosome 13 Contains two novel genes, complete sequence Length = 61615 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 caccttcttttcttcttcct 455 |||||||||||||||||||| Sbjct: 8080 caccttcttttcttcttcct 8061
>gb|AF187948.1| Fromia indica specimen-voucher Fi cytochrome oxidase I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 590 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 ttattccaccttcttttcttcttc 453 ||||||| |||||||||||||||| Sbjct: 41 ttattcccccttcttttcttcttc 64
>gb|AF187947.1| Fromia indica specimen-voucher Fi cytochrome oxidase I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 593 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 ttattccaccttcttttcttcttc 453 ||||||| |||||||||||||||| Sbjct: 41 ttattcccccttcttttcttcttc 64
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 accttcttttcttcttcctt 456 |||||||||||||||||||| Sbjct: 1107028 accttcttttcttcttcctt 1107047
>emb|AL772234.5| Mouse DNA sequence from clone RP23-413M22 on chromosome 11, complete sequence Length = 193528 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctttctcccttccccttctt 88 |||||||||||||||||||| Sbjct: 118183 ctttctcccttccccttctt 118164
>emb|CR381644.8| Zebrafish DNA sequence from clone CH211-80A15 in linkage group 8, complete sequence Length = 171750 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gtttattccaccttcttttc 447 |||||||||||||||||||| Sbjct: 80486 gtttattccaccttcttttc 80505
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 50932 ccttcttttcttcttccttc 50951
>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 105624 cttcttttcttcttccttcc 105643
>gb|DQ023266.1| Pan troglodytes HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 200028 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 67392 cttcttttcttcttccttcc 67411
>gb|DQ023265.1| Hylobates klossii HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 46648 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 43786 cttcttttcttcttccttcc 43805
>gb|DQ023264.1| Pongo pygmaeus HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 44479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 29290 cttcttttcttcttccttcc 29309
>gb|AC137843.15| Mus musculus chromosome 9, clone RP23-413J12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctttctcccttccccttctt 88 |||||||||||||||||||| Sbjct: 179961 ctttctcccttccccttctt 179980
>gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, complete sequence Length = 157606 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 138376 cttcttttcttcttccttcc 138357
>dbj|AK126369.1| Homo sapiens cDNA FLJ44405 fis, clone TUTER2001461, highly similar to Homo sapiens mRNA for TBP-1 interacting protein Length = 2402 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 433 cttcttttcttcttccttcc 414
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 1631 ccttcttttcttcttccttc 1612 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 1302 ccttcttttcttcttccttc 1283
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 15855 ccttcttttcttcttccttc 15836 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 15526 ccttcttttcttcttccttc 15507
>gb|AC087395.7| Homo sapiens chromosome 18, clone RP11-322K20, complete sequence Length = 63288 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 41 cttcttttcttcttccttcc 22
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 19364 ttcttttcttcttccttccc 19345
>ref|XM_941093.1| PREDICTED: Homo sapiens chromosome 14 open reading frame 73 (C14orf73), mRNA Length = 2526 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctgctccctgttccggtcct 144 |||||||||||||||||||| Sbjct: 264 ctgctccctgttccggtcct 283
>ref|XM_040910.7| PREDICTED: Homo sapiens chromosome 14 open reading frame 73 (C14orf73), mRNA Length = 2526 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ctgctccctgttccggtcct 144 |||||||||||||||||||| Sbjct: 264 ctgctccctgttccggtcct 283
>gb|AF190749.1|AF190749 Homo sapiens chromosome 17, map 17q11 near 692 gene sequence Length = 21118 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 19292 cttcttttcttcttccttcc 19311
>gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 133835 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttccttc 457 ||||||| |||||||||||||||| Sbjct: 8730 tccacctccttttcttcttccttc 8707
>gb|AC155331.5| Mus musculus 6 BAC RP24-189G6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160364 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 tccaccttcttttcttcttccttc 457 ||||||| |||||||||||||||| Sbjct: 26696 tccacctccttttcttcttccttc 26719
>gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chromosome unknown, complete sequence Length = 210950 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 caccttcttttcttcttcct 455 |||||||||||||||||||| Sbjct: 193992 caccttcttttcttcttcct 194011
>dbj|AK006585.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700031M16 product:unclassifiable, full insert sequence Length = 848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 738 ccttcttttcttcttccttc 719
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccttctccgtcgccttcc 339 |||||||||||||||||||| Sbjct: 93615 ctccttctccgtcgccttcc 93634
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 17912677 ttcttttcttcttccttccc 17912696
>gb|AC159029.1| Pan troglodytes BAC clone CH251-407C14 from chromosome unknown, complete sequence Length = 175795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 caccttcttttcttcttcct 455 |||||||||||||||||||| Sbjct: 7104 caccttcttttcttcttcct 7123
>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete sequence Length = 82454 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 53101 tccaccttcttttcttcttc 53082
>gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, complete sequence Length = 45027 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 17098 ccttcttttcttcttccttc 17079
>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence Length = 179146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 103409 cttcttttcttcttccttcc 103390
>gb|AC101510.12| Mus musculus chromosome 3, clone RP23-190B7, complete sequence Length = 235744 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 49631 cttcttttcttcttccttcc 49612 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 49440 cttcttttcttcttccttcc 49421
>gb|AC119935.17| Mus musculus chromosome 15, clone RP24-261L5, complete sequence Length = 163746 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 15130 ccttcttttcttcttccttc 15149
>gb|AY924731.1| Arabidopsis thaliana hypothetical protein (At1g77765) mRNA, complete cds Length = 519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 310 tccaccttcttttcttcttc 291
>emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-736N17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ctgctccctgttccggtcct 144 |||||||||||||||||||| Sbjct: 139960 ctgctccctgttccggtcct 139941
>gb|AC104225.18| Mus musculus chromosome 15, clone RP23-74H8, complete sequence Length = 246325 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 181548 ttcttttcttcttccttccc 181567
>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence Length = 172240 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 150202 ccttcttttcttcttccttc 150221
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 17921930 ttcttttcttcttccttccc 17921949
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctccttctccgtcgccttcc 339 |||||||||||||||||||| Sbjct: 4696 ctccttctccgtcgccttcc 4715
>gb|AC002368.1|AC002368 Homo sapiens Xq28 BAC PAC and cosmid clones containing FMR2 gene exons 1,2, and 3, complete sequence Length = 324816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctgctttctcccttcccc 83 |||||||||||||||||||| Sbjct: 80346 tcctgctttctcccttcccc 80365
>emb|AL626764.6| Mouse DNA sequence from clone RP23-94L18 on chromosome 4, complete sequence Length = 219582 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 cttcttttcttcttccttcc 458 |||||||||||||||||||| Sbjct: 27920 cttcttttcttcttccttcc 27939
>emb|AL773567.16| Mouse DNA sequence from clone RP23-204P1 on chromosome 4, complete sequence Length = 189970 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 30961 ccttcttttcttcttccttc 30980
>emb|AL359219.4|CNS05TEH Human chromosome 14 DNA sequence BAC C-2315A10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 114957 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 tccaccttcttttcttcttc 453 |||||||||||||||||||| Sbjct: 16682 tccaccttcttttcttcttc 16701
>emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chromosome X, complete sequence Length = 213401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ttcttttcttcttccttccc 459 |||||||||||||||||||| Sbjct: 200670 ttcttttcttcttccttccc 200651
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccttcttttcttcttccttc 457 |||||||||||||||||||| Sbjct: 35993 ccttcttttcttcttccttc 35974
>gb|L13855.1|SH1UDNAG Pseudorabies virus uracil-DNA glycosylase gene, complete cds Length = 4100 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ctccttctccgtcgccttcc 339 |||||||||||||||||||| Sbjct: 2906 ctccttctccgtcgccttcc 2887 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,330,226 Number of Sequences: 3902068 Number of extensions: 4330226 Number of successful extensions: 111409 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110660 Number of HSP's gapped (non-prelim): 748 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
