ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast61a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7... 29 3.9
2ACTZ_MOUSE (P61164) Alpha-centractin (Centractin) (Centrosome-as... 29 5.1
3ACTZ_HUMAN (P61163) Alpha-centractin (Centractin) (Centrosome-as... 29 5.1
4ACTZ_CANFA (P61162) Alpha-centractin (Centractin) (Centrosome-as... 29 5.1
5ACTY_MOUSE (Q8R5C5) Beta-centractin (Actin-related protein 1B) (... 28 6.7
6ACTY_HUMAN (P42025) Beta-centractin (Actin-related protein 1B) (... 28 6.7
7ACM3_CAEEL (Q9U7D5) Muscarinic acetylcholine receptor gar-3 (G-p... 28 6.7
8SYV_RHOS4 (Q3J4Z5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 28 8.8

>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney|
           inhibitor of apoptosis protein) (KIAP) (Melanoma
           inhibitor of apoptosis protein) (ML-IAP) (Livin)
          Length = 298

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 362 GPRSLGYPV*YLDVDRSWETILSKNDASAISKAHPARVGEARLGTQAS 219
           GPRSLG PV  LD  R+W+ +    D   + +  P    E   G  A+
Sbjct: 31  GPRSLGSPVLGLDTCRAWDHV----DGQILGQLRPLTEEEEEEGAGAT 74



to top

>ACTZ_MOUSE (P61164) Alpha-centractin (Centractin) (Centrosome-associated actin|
           homolog) (Actin-RPV) (ARP1)
          Length = 376

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 326 DVDRSWETILSKNDASAISKAHPARVGEARLGTQASEQ 213
           D++R W+ + SK+     S+ HP  + EA L  + + +
Sbjct: 85  DMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRE 122



to top

>ACTZ_HUMAN (P61163) Alpha-centractin (Centractin) (Centrosome-associated actin|
           homolog) (Actin-RPV) (ARP1)
          Length = 376

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 326 DVDRSWETILSKNDASAISKAHPARVGEARLGTQASEQ 213
           D++R W+ + SK+     S+ HP  + EA L  + + +
Sbjct: 85  DMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRE 122



to top

>ACTZ_CANFA (P61162) Alpha-centractin (Centractin) (Centrosome-associated actin|
           homolog) (Actin-RPV) (ARP1)
          Length = 376

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 326 DVDRSWETILSKNDASAISKAHPARVGEARLGTQASEQ 213
           D++R W+ + SK+     S+ HP  + EA L  + + +
Sbjct: 85  DMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRE 122



to top

>ACTY_MOUSE (Q8R5C5) Beta-centractin (Actin-related protein 1B) (ARP1B)|
          Length = 376

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 326 DVDRSWETILSKNDASAISKAHPARVGEARLGTQASEQ 213
           D++R W+ + SK+     S+ HP  + EA L    + +
Sbjct: 85  DMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNRE 122



to top

>ACTY_HUMAN (P42025) Beta-centractin (Actin-related protein 1B) (ARP1B)|
          Length = 376

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 326 DVDRSWETILSKNDASAISKAHPARVGEARLGTQASEQ 213
           D++R W+ + SK+     S+ HP  + EA L    + +
Sbjct: 85  DMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNRE 122



to top

>ACM3_CAEEL (Q9U7D5) Muscarinic acetylcholine receptor gar-3 (G-protein linked|
           acetylcholine receptor 3)
          Length = 611

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
 Frame = -2

Query: 205 TTNKLLRRPSCG------LWPRGVVGWPITTRRAAVCGG*CVPQ----SPWPVGGAAVAS 56
           TT K L   +C       LWP  ++ WP    +     G CV Q    +P+   G AVA+
Sbjct: 178 TTKKALTMIACTYIISLILWPPWIISWPYIEGKFTAEPGTCVVQFLQTNPYVTVGTAVAA 237



to top

>SYV_RHOS4 (Q3J4Z5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 987

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 178 SCGLWPRGVVGWPITTRRAA 119
           S GLWP G +GWP  T   A
Sbjct: 564 SSGLWPIGTLGWPEETPELA 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,709,904
Number of Sequences: 219361
Number of extensions: 956563
Number of successful extensions: 2666
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2666
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top