| Clone Name | bast60h11 |
|---|---|
| Clone Library Name | barley_pub |
>PIP26_ORYSA (Q7XLR1) Probable aquaporin PIP2.6 (Plasma membrane intrinsic| protein 2.6) (OsPIP2.6) Length = 282 Score = 38.1 bits (87), Expect = 0.007 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +1 Query: 1 YITVATVIGYKVQSAADPC 57 YITVATVIGYKVQS+AD C Sbjct: 52 YITVATVIGYKVQSSADQC 70
>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)| (PIP2a) Length = 287 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +1 Query: 1 YITVATVIGYKVQSAAD 51 YITV TVIGYK+QS D Sbjct: 53 YITVLTVIGYKIQSDTD 69
>PIP1_ATRCA (P42767) Aquaporin PIP-type| Length = 282 Score = 29.6 bits (65), Expect = 2.6 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 Query: 1 YITVATVIGYKVQSAADPC 57 YITVATVIGYK ++ DPC Sbjct: 54 YITVATVIGYKKET--DPC 70
>PIP22_ORYSA (Q6K215) Probable aquaporin PIP2.2 (Plasma membrane intrinsic| protein 2.2) (OsPIP2.2) Length = 288 Score = 28.9 bits (63), Expect = 4.4 Identities = 14/16 (87%), Positives = 14/16 (87%) Frame = +1 Query: 1 YITVATVIGYKVQSAA 48 YITVATVIGYK QS A Sbjct: 55 YITVATVIGYKHQSDA 70
>PIP22_ARATH (P43287) Aquaporin PIP2.2 (Plasma membrane intrinsic protein 2b)| (PIP2b) (TMP2b) Length = 285 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +1 Query: 1 YITVATVIGYKVQS 42 YITV TVIGYK+QS Sbjct: 51 YITVLTVIGYKIQS 64
>PIP23_ORYSA (Q7XUA6) Probable aquaporin PIP2.3 (Plasma membrane intrinsic| protein 2.3) (OsPIP2.3) Length = 290 Score = 28.1 bits (61), Expect = 7.4 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +1 Query: 1 YITVATVIGYKVQS 42 YITVATVIGYK QS Sbjct: 56 YITVATVIGYKHQS 69
>PIP23_ARATH (P30302) Aquaporin PIP2.3 (Plasma membrane intrinsic protein 2c)| (PIP2c) (TMP2C) (RD28-PIP) (Water stress-induced tonoplast intrinsic protein) (WSI-TIP) Length = 285 Score = 28.1 bits (61), Expect = 7.4 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 1 YITVATVIGYKVQS 42 Y+TV TVIGYK+QS Sbjct: 51 YVTVLTVIGYKIQS 64
>PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane intrinsic| protein 2a) (PIP2a) (OsPIP2.1) Length = 290 Score = 27.7 bits (60), Expect = 9.7 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +1 Query: 1 YITVATVIGYKVQSAA 48 YITVATVIGYK Q+ A Sbjct: 56 YITVATVIGYKHQTDA 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,363,793 Number of Sequences: 219361 Number of extensions: 53101 Number of successful extensions: 212 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 212 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)