ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60h09 |
|---|---|
| Clone Library Name | barley_pub |
>ZN706_MOUSE (Q9D115) Zinc finger protein 706| Length = 76 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +2 Query: 197 KAGQKDRLGQEKGGHAKME----CPLCKVTAPDVKSMQIHHEARHPKLP 331 +AGQK + G ++ AK C +C+ PD K+ + H E++HPK P Sbjct: 18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66
>ZN706_HUMAN (Q9Y5V0) Zinc finger protein 706| Length = 76 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +2 Query: 197 KAGQKDRLGQEKGGHAKME----CPLCKVTAPDVKSMQIHHEARHPKLP 331 +AGQK + G ++ AK C +C+ PD K+ + H E++HPK P Sbjct: 18 QAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66
>ZN706_CHICK (Q5ZMM5) Zinc finger protein 706| Length = 76 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +2 Query: 197 KAGQKDRLGQEKGGHAKME----CPLCKVTAPDVKSMQIHHEARHPKLP 331 +A QK + G ++ AK C +C+ PD K+ + H E++HPK P Sbjct: 18 QAEQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTP 66
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 31.2 bits (69), Expect = 0.67 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +2 Query: 245 KMECPLCKVTAPDVKSMQIHHEARHP 322 ++ C LC TAP ++++H + RHP Sbjct: 1134 ELHCSLCPFTAPAATALRLHQKRRHP 1159
>ZN524_MOUSE (Q9D0B1) Zinc finger protein 524| Length = 321 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/44 (25%), Positives = 24/44 (54%) Frame = +2 Query: 197 KAGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIHHEARHPKL 328 +AG+ + G +CP C+V + +++ H++ +HP+L Sbjct: 176 EAGELAHHHRIHSGERPYQCPSCRVRFTEANTLRRHYKRKHPEL 219
>BNC1_HUMAN (Q01954) Zinc finger protein basonuclin-1| Length = 994 Score = 28.9 bits (63), Expect = 3.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%) Frame = +2 Query: 152 IAAKIDAATTNRGGGKAGQKDRLGQEK-GGHA--------KMECPLCKVTAPDVKSMQIH 304 +A + +A +NRG +D E G HA + +C +CK T + S++IH Sbjct: 679 LAGGLFSALSNRGMAFPCLEDSKELEHVGQHALARQIEENRFQCDICKKTFKNACSVKIH 738 Query: 305 HEARHPK 325 H+ H K Sbjct: 739 HKNMHVK 745
>OPTN_XENLA (Q5M7B7) Optineurin| Length = 532 Score = 28.5 bits (62), Expect = 4.4 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +2 Query: 254 CPLCKVTAPDVKSMQIH 304 CP C +T PD+ ++QIH Sbjct: 510 CPKCNLTVPDMDTLQIH 526
>ZN689_RAT (Q99PJ7) Zinc finger protein 689 (Transcription factor HIT-39)| Length = 500 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/67 (25%), Positives = 31/67 (46%) Frame = +2 Query: 131 KKHTAKEIAAKIDAATTNRGGGKAGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIHHE 310 +K+ KE+ D + G K + + ++ G CP C T PD+ +++ H Sbjct: 112 QKNEEKEVFPPKDVPRKGKRGRKPSKPRLIARQTSGGPI--CPDCGCTFPDLPALESHKC 169 Query: 311 ARHPKLP 331 A++ K P Sbjct: 170 AQNLKKP 176
>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 694 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -2 Query: 329 GAWGGAPRGGSAST*RRGPSPCRAG 255 GAW G P GGS R +P AG Sbjct: 507 GAWNGEPSGGSGGEGSRPATPAAAG 531
>OPTN_MACMU (Q861Q8) Optineurin| Length = 571 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 203 GQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIH 304 G +DR Q++ CP C PD+ ++QIH Sbjct: 532 GTEDRDWQQQRNIPIHSCPKCGEVLPDIDTLQIH 565
>OPTN_MACFA (Q95KA2) Optineurin| Length = 571 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 203 GQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIH 304 G +DR Q++ CP C PD+ ++QIH Sbjct: 532 GTEDRDWQQQRNIPIHSCPKCGEVLPDIDTLQIH 565
>TRPS1_HUMAN (Q9UHF7) Zinc finger transcription factor Trps1 (Zinc finger| protein GC79) (Tricho-rhino-phalangeal syndrome type I protein) Length = 1281 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +2 Query: 221 GQEKGGHAKMECPLCKVTAPDVKSMQIHHEARH 319 G K +C C T PDV + H+E+ H Sbjct: 605 GAAGSSRVKHQCHQCSFTTPDVDVLLFHYESVH 637
>PRSA2_BACAN (Q81TU1) Foldase protein prsA 2 precursor (EC 5.2.1.8)| Length = 285 Score = 27.7 bits (60), Expect = 7.4 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = +2 Query: 134 KHTAKEIAAKIDAATTNRGGGKAGQKDRLGQEKGG-----HAKMECPLCKVTAPDVKSMQ 298 ++ AKEI K+D + K +D L +EKGG H+ P + A +K Q Sbjct: 147 ENEAKEIKKKLDTGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIGQ 206 Query: 299 IHHEARHP 322 I + P Sbjct: 207 ISDPVQSP 214
>ZN524_HUMAN (Q96C55) Zinc finger protein 524| Length = 264 Score = 27.7 bits (60), Expect = 7.4 Identities = 9/43 (20%), Positives = 23/43 (53%) Frame = +2 Query: 197 KAGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIHHEARHPK 325 +AG+ + G +CP+C++ + +++ H + +HP+ Sbjct: 181 EAGELAHHHRVHSGERPYQCPICRLRFTEANTLRRHAKRKHPE 223
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 3/30 (10%) Frame = +1 Query: 250 GVPALQGDGPRRQ---VDADPPRGAPPQAP 330 G P GD P +A PP APPQ P Sbjct: 502 GGPTTHGDAPSSSSSLAEAQPPLAAPPQKP 531
>TRPS1_XENLA (Q90ZS6) Zinc finger transcription factor Trps1| Length = 1271 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = +2 Query: 221 GQEKGGHAKMECPLCKVTAPDVKSMQIHHEARH 319 G + K +C C ++PDV + +H+E H Sbjct: 595 GGTESTRVKHQCDQCSFSSPDVDVLLLHYENAH 627
>PRSA2_BACCR (Q81GN0) Foldase protein prsA 2 precursor (EC 5.2.1.8)| Length = 285 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 134 KHTAKEIAAKIDAATTNRGGGKAGQKDRLGQEKGG 238 ++ AKEI +K+DA + K +D L ++KGG Sbjct: 147 ENEAKEIKSKLDAGASFEELAKQESQDLLSKDKGG 181
>HD2A_SOYBN (Q8LJS2) Histone deacetylase 2a (HD2a) (Nucleolar histone| deacetylase HD2-p39) Length = 295 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/66 (24%), Positives = 30/66 (45%) Frame = +2 Query: 122 AKPKKHTAKEIAAKIDAATTNRGGGKAGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQI 301 A P+K K+ + + ++ GGK + GQ ++ C CK + + +Q Sbjct: 229 ATPEKTDGKK-SVHVATPHPSKKGGKTPNSTK-GQTPNSAGQLSCASCKKSFTNEAGLQQ 286 Query: 302 HHEARH 319 H +A+H Sbjct: 287 HKKAKH 292
>ZN462_HUMAN (Q96JM2) Zinc finger protein 462| Length = 1412 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 224 QEKGGHAKMECPLCKVTAPDVKSMQIHHEARH 319 Q +G + +C LC T P K + H++ RH Sbjct: 534 QPEGKNNLFKCALCAYTNPIRKGLAAHYQKRH 565
>NEMO_HUMAN (Q9Y6K9) NF-kappa-B essential modulator (NEMO) (NF-kappa-B| essential modifier) (Inhibitor of nuclear factor kappa-B kinase gamma subunit) (IkB kinase gamma subunit) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) Length = 419 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +2 Query: 254 CPLCKVTAPDVKSMQIH 304 CP C+ APD+ ++QIH Sbjct: 397 CPKCQYQAPDMDTLQIH 413
>OPTN_PONPY (Q5R923) Optineurin| Length = 527 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +2 Query: 134 KHTAKEIAAKIDAATTNRGGGKAGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIH 304 +H A+ A A RG +DR +++ CP C PD+ ++QIH Sbjct: 470 RHGARTSGADQQAYLVQRGA-----EDRDWRQQRNIPIHSCPKCGEVLPDIDTLQIH 521
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/44 (22%), Positives = 21/44 (47%) Frame = +2 Query: 200 AGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIHHEARHPKLP 331 + ++ + +E +CP CK + DV +++H +H P Sbjct: 1217 SSKRPKASEEIKPEQMYQCPYCKYSNADVNRLRVHAMTQHSVQP 1260
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/44 (22%), Positives = 21/44 (47%) Frame = +2 Query: 200 AGQKDRLGQEKGGHAKMECPLCKVTAPDVKSMQIHHEARHPKLP 331 + ++ + +E +CP CK + DV +++H +H P Sbjct: 1207 SSKRPKTAEEIKPEQMYQCPYCKYSNADVNRLRVHAMTQHSVQP 1250
>NEMO_MOUSE (O88522) NF-kappa-B essential modulator (NEMO) (NF-kappa-B| essential modifier) (Inhibitor of nuclear factor kappa-B kinase gamma subunit) (IkB kinase gamma subunit) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) Length = 412 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +2 Query: 254 CPLCKVTAPDVKSMQIH 304 CP C+ APD+ ++QIH Sbjct: 390 CPKCQYQAPDMDTLQIH 406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.139 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,002,734 Number of Sequences: 219361 Number of extensions: 336492 Number of successful extensions: 1365 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1283 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1363 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)
