Clone Information

BLAST Search Result

Clone Name	bast60h08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AUHM_MOUSE (Q9JLZ3) Methylglutaconyl-CoA hydratase, mitochondria...	59	6e-09
2	AUMH_HUMAN (Q13825) Methylglutaconyl-CoA hydratase, mitochondria...	57	2e-08
3	ECHA6_MYCLE (Q50130) Probable enoyl-CoA hydratase echA6 (EC 4.2....	46	4e-05
4	ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2...	45	5e-05
5	ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2...	45	5e-05
6	ECHA8_MYCLE (O07137) Probable enoyl-CoA hydratase echA8 (EC 4.2....	45	7e-05
7	MENB_HAEIN (P44960) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	42	7e-04
8	ECHA6_MYCTU (P64014) Probable enoyl-CoA hydratase echA6 (EC 4.2....	41	0.001
9	ECHA6_MYCBO (P64015) Probable enoyl-CoA hydratase echA6 (EC 4.2....	41	0.001
10	MENB_STAES (Q8CPQ4) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	40	0.003
11	MENB_STAHJ (Q4L549) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	39	0.004
12	MENB_STAEQ (Q5HQC3) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	39	0.004
13	ECHA8_MYCTU (P64016) Probable enoyl-CoA hydratase echA8 (EC 4.2....	39	0.005
14	ECHA8_MYCBO (P64017) Probable enoyl-CoA hydratase echA8 (EC 4.2....	39	0.005
15	ECHM_CAEEL (P34559) Probable enoyl-CoA hydratase, mitochondrial ...	38	0.008
16	YD036_YEAST (P28817) Hypothetical 56.3 kDa protein in ARO3-KRS1 ...	37	0.014
17	MENB_PASMU (Q9CLV5) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.014
18	MENB_STAAW (Q8NXA0) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.018
19	MENB_STAAS (Q6GAG7) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.018
20	MENB_STAS1 (Q49WG8) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.018
21	ECHH_RHIME (Q52995) Probable enoyl-CoA hydratase (EC 4.2.1.17)	37	0.024
22	MENB_STAAR (Q6GI37) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.024
23	MENB_STAAN (Q7A6A9) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.024
24	MENB_STAAM (Q99V48) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.024
25	MENB_STAAC (Q5HH38) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	37	0.024
26	MENB_ECOLI (P0ABU0) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	36	0.031
27	MENB_ECOL6 (P0ABU1) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	36	0.031
28	ECHM_RAT (P14604) Enoyl-CoA hydratase, mitochondrial precursor (...	36	0.031
29	ECHM_MOUSE (Q8BH95) Enoyl-CoA hydratase, mitochondrial precursor...	36	0.031
30	MENB_BACSU (P23966) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	36	0.041
31	ECHM_BOVIN (Q58DM8) Enoyl-CoA hydratase, mitochondrial precursor...	36	0.041
32	PAAF_ECOLI (P76082) Probable enoyl-CoA hydratase paaF (EC 4.2.1.17)	35	0.054
33	ECH1_RAT (Q62651) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitoc...	35	0.070
34	ECH1_MOUSE (O35459) Delta3,5-delta2,4-dienoyl-CoA isomerase, mit...	35	0.070
35	ECH1_PONPY (Q5RFG0) Delta3,5-delta2,4-dienoyl-CoA isomerase, mit...	35	0.092
36	ECH1_HUMAN (Q13011) Delta3,5-delta2,4-dienoyl-CoA isomerase, mit...	34	0.12
37	ECHH_RHOCA (P24162) Probable enoyl-CoA hydratase (EC 4.2.1.17)	33	0.20
38	ECHP_CAVPO (P55100) Peroxisomal bifunctional enzyme (PBE) (PBFE)...	33	0.20
39	CAID_PROSL (Q8GB17) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	33	0.27
40	ECHM_HUMAN (P30084) Enoyl-CoA hydratase, mitochondrial precursor...	33	0.27
41	PKSH_BACSU (P40805) Putative polyketide biosynthesis enoyl-CoA h...	33	0.35
42	ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [...	33	0.35
43	PECI_MOUSE (Q9WUR2) Peroxisomal 3,2-trans-enoyl-CoA isomerase (E...	32	0.45
44	ECHM_PONPY (Q5R646) Enoyl-CoA hydratase, mitochondrial precursor...	32	0.45
45	CRT_CLOAB (P52046) 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55...	32	0.59
46	EFTS_HUMAN (P43897) Elongation factor Ts, mitochondrial precurso...	32	0.78
47	EFTS_RAT (Q9QYU2) Elongation factor Ts, mitochondrial precursor ...	31	1.0
48	EFTS_MOUSE (Q9CZR8) Elongation factor Ts, mitochondrial precurso...	31	1.0
49	CAID_SALTY (Q8ZRX5) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	31	1.3
50	CAID_SALTI (Q8Z9L5) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	31	1.3
51	PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-s...	30	1.7
52	TREA_RABIT (P19813) Trehalase precursor (EC 3.2.1.28) (Alpha,alp...	30	1.7
53	CYSQ_HAEIN (P44332) Protein cysQ homolog	30	1.7
54	EFTS_BOVIN (P43896) Elongation factor Ts, mitochondrial precurso...	30	2.3
55	Y124_AQUAE (O66524) UPF0109 protein aq_124	30	2.3
56	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	30	2.3
57	YKB4_CAEEL (P41942) Hypothetical protein B0272.4 in chromosome III	30	2.9
58	ECHA_HUMAN (P40939) Trifunctional enzyme alpha subunit, mitochon...	30	2.9
59	SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequ...	29	3.8
60	SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequ...	29	3.8
61	CAID_SHIFL (P59395) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	29	3.8
62	CAID_ECOLI (P31551) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	29	3.8
63	CAID_ECOL6 (Q8FLA6) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	29	3.8
64	CAID_ECO57 (Q8XA35) Carnitinyl-CoA dehydratase (EC 4.2.1.-) (Cro...	29	3.8
65	ECHA_PIG (Q29554) Trifunctional enzyme alpha subunit, mitochondr...	29	3.8
66	PECI_HUMAN (O75521) Peroxisomal 3,2-trans-enoyl-CoA isomerase (E...	29	5.0
67	TEGU_EBV (P03186) Large tegument protein	28	6.6
68	MENB_CYACA (Q9TM10) Naphthoate synthase (EC 4.1.3.36) (Dihydroxy...	28	6.6
69	EMPA_VIBAN (P43147) Virulence metalloprotease precursor (EC 3.4....	28	6.6
70	TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2	28	6.6
71	YHO5_YEAST (P38803) Hypothetical 37.9 kDa protein in STE12-NAM8 ...	28	8.6

>AUHM_MOUSE (Q9JLZ3) Methylglutaconyl-CoA hydratase, mitochondrial precursor|
           (EC 4.2.1.18) (AU-specific RNA-binding enoyl-CoA
           hydratase) (AU-binding enoyl-CoA hydratase) (muAUH)
          Length = 314

 Score = 58.5 bits (140), Expect = 6e-09
 Identities = 27/71 (38%), Positives = 43/71 (60%)
 Frame = +1

Query: 205 DPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVP 384
           D +R+  L   + GIV L + R   +NA+ K +LK L  A+D + +D     +++ S VP
Sbjct: 50  DELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVP 109

Query: 385 KVFCAGADLRK 417
            +FCAGADL++
Sbjct: 110 GIFCAGADLKE 120

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>AUMH_HUMAN (Q13825) Methylglutaconyl-CoA hydratase, mitochondrial precursor|
           (EC 4.2.1.18) (AU-specific RNA-binding enoyl-CoA
           hydratase) (AU-binding protein/enoyl-CoA hydratase)
          Length = 339

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 25/71 (35%), Positives = 43/71 (60%)
 Frame = +1

Query: 205 DPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVP 384
           D +R+  L   + GIV L + R   +N++ K ++K L  A+D + +D     +++ S VP
Sbjct: 75  DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVP 134

Query: 385 KVFCAGADLRK 417
            +FCAGADL++
Sbjct: 135 GIFCAGADLKE 145

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>ECHA6_MYCLE (Q50130) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 247

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGA--DPTANVVLVASSVPKVFCAGADL 411
           G++ + L+RPE RNA+  ++++ LR A+ K  +     +  V+V +    VFCAGADL
Sbjct: 9   GVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADL 66

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>ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 27/73 (36%), Positives = 40/73 (54%)
 Frame = +1

Query: 193 LSQPDPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVA 372
           ++Q DPV L      D  +  + +  P+ RNA+  EM   LR+A+ +   DP  + V+V 
Sbjct: 1   MAQYDPVLLSV----DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVV- 55

Query: 373 SSVPKVFCAGADL 411
           +   K FCAGADL
Sbjct: 56  TGAGKAFCAGADL 68

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>ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 27/73 (36%), Positives = 40/73 (54%)
 Frame = +1

Query: 193 LSQPDPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVA 372
           ++Q DPV L      D  +  + +  P+ RNA+  EM   LR+A+ +   DP  + V+V 
Sbjct: 1   MAQYDPVLLSV----DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVV- 55

Query: 373 SSVPKVFCAGADL 411
           +   K FCAGADL
Sbjct: 56  TGAGKAFCAGADL 68

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>ECHA8_MYCLE (O07137) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)|
          Length = 257

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           + L RP+A NA+  +M+  + +A  ++  DP    +L+  S PKVF AGAD+++
Sbjct: 17  ITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGS-PKVFAAGADIKE 69

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>MENB_HAEIN (P44960) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +1

Query: 211 VRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKV 390
           +R HK +    GI ++ + RPE RNA   + +K + +A      D    V+++     K 
Sbjct: 25  IRYHKST---DGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKA 81

Query: 391 FCAGAD 408
           FC+G D
Sbjct: 82  FCSGGD 87

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>ECHA6_MYCTU (P64014) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 243

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ + L+RPE RNA+  ++++ L  A+ K G      +VL        FCAGADL
Sbjct: 10  VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGT--AFCAGADL 62

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>ECHA6_MYCBO (P64015) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 243

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ + L+RPE RNA+  ++++ L  A+ K G      +VL        FCAGADL
Sbjct: 10  VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAIVLTGQGT--AFCAGADL 62

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>MENB_STAES (Q8CPQ4) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 272

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = +1

Query: 178 RALQILSQPDPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTAN 357
           R  +IL + D ++         GI ++ + RPE RNA   + +  +  A  +   D   +
Sbjct: 3   RQWEILREYDEIKYEFFE----GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVS 58

Query: 358 VVLVASSVPKVFCAGADLRK 417
           V+++     K FC+G D +K
Sbjct: 59  VIVLTGEGDKAFCSGGDQKK 78

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>MENB_STAHJ (Q4L549) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 272

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++     K FC+G D +K
Sbjct: 21  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILTGEGDKAFCSGGDQKK 78

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>MENB_STAEQ (Q5HQC3) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 272

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++     K FC+G D +K
Sbjct: 21  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKK 78

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>ECHA8_MYCTU (P64016) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)|
          Length = 257

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           D  +  + L RP+A NA+  +++  + SA  ++  DP    +++  S  K F AGAD+++
Sbjct: 11  DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKE 69

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>ECHA8_MYCBO (P64017) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)|
          Length = 257

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           D  +  + L RP+A NA+  +++  + SA  ++  DP    +++  S  K F AGAD+++
Sbjct: 11  DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKE 69

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>ECHM_CAEEL (P34559) Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)|
          Length = 288

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 17/72 (23%), Positives = 42/72 (58%)
 Frame = +1

Query: 202 PDPVRLHKLSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSV 381
           P+ +++ K+    + +  ++L RP+A NA+  +++  L  A++ +  D +   +++  S 
Sbjct: 31  PEMIKIEKVGEKQN-VALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGS- 88

Query: 382 PKVFCAGADLRK 417
            + F AGAD+++
Sbjct: 89  ERAFAAGADIKE 100

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>YD036_YEAST (P28817) Hypothetical 56.3 kDa protein in ARO3-KRS1 intergenic|
           region
          Length = 500

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTAN-VVLVASSVPKVFCAGADL 411
           + L RP+  NA+  EM + +   +++     T N V+L +S+ P+ FCAG D+
Sbjct: 50  ITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDV 102

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>MENB_PASMU (Q9CLV5) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           GI ++ + RPE RNA   + +K +  A      D    V+++     K FC+G D
Sbjct: 33  GIAKITINRPEVRNAFRPQTVKEMIQAFADARFDEQIGVIVLTGQGEKAFCSGGD 87

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>MENB_STAAW (Q8NXA0) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_STAAS (Q6GAG7) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_STAS1 (Q49WG8) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 272

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           GI ++ + RPE RNA     ++ +  A  +   D   +V+++     K FC+G D
Sbjct: 21  GIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILTGEGDKAFCSGGD 75

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>ECHH_RHIME (Q52995) Probable enoyl-CoA hydratase (EC 4.2.1.17)|
          Length = 257

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 18/54 (33%), Positives = 32/54 (59%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           + L RP+A NA+   +++ L +A+    AD     +++A S  K F AGAD+++
Sbjct: 17  ITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGS-EKAFAAGADIKE 69

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>MENB_STAAR (Q6GI37) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_STAAN (Q7A6A9) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_STAAM (Q99V48) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_STAAC (Q5HH38) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 273

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           GI ++ + RPE RNA   + +  +  A  +   D   +V+++       FC+G D +K
Sbjct: 22  GIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKK 79

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>MENB_ECOLI (P0ABU0) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           GI ++ + RP+ RNA     +K +  A+     D    V+++  +  K FC+G D
Sbjct: 33  GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGD 87

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>MENB_ECOL6 (P0ABU1) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           GI ++ + RP+ RNA     +K +  A+     D    V+++  +  K FC+G D
Sbjct: 33  GIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGD 87

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>ECHM_RAT (P14604) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)|
           (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA
           hydratase 1)
          Length = 290

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 17/60 (28%), Positives = 34/60 (56%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           +S +  ++L RP+A NA+   +++ L  A++    DP    +++     K F AGAD+++
Sbjct: 44  NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGG-EKAFAAGADIKE 102

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>ECHM_MOUSE (Q8BH95) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)|
           (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA
           hydratase 1)
          Length = 290

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 17/60 (28%), Positives = 34/60 (56%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           +S +  ++L RP+A NA+   +++ L  A++    DP    +++     K F AGAD+++
Sbjct: 44  NSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGG-DKAFAAGADIKE 102

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>MENB_BACSU (P23966) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 271

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 241 SGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           +GI ++ + RPE  NA   + +  +  A      D    V+++A +  K FC+G D
Sbjct: 19  NGIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDKAFCSGGD 74

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>ECHM_BOVIN (Q58DM8) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)|
           (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA
           hydratase 1)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           +S +  ++L RP+A NA+   ++  L  A+     DP    +++     KVF AGAD+++
Sbjct: 44  NSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGG-EKVFAAGADIKE 102

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>PAAF_ECOLI (P76082) Probable enoyl-CoA hydratase paaF (EC 4.2.1.17)|
          Length = 255

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           ++ L L RP ARNA+   +L  L + ++    D + +V ++  +  + F AGADL +
Sbjct: 12  VLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNE 67

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>ECH1_RAT (Q62651) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial|
           precursor (EC 5.3.3.-)
          Length = 327

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ ++L RPE RNA+ +   + L     K+  D     V+V S   K+F +G DL
Sbjct: 66  VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVV-SGAGKMFTSGIDL 119

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>ECH1_MOUSE (O35459) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial|
           precursor (EC 5.3.3.-)
          Length = 327

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ ++L RPE RNA+ +   + L     K+  D     V+V S   K+F +G DL
Sbjct: 66  VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVV-SGAGKMFTSGIDL 119

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>ECH1_PONPY (Q5RFG0) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial|
           precursor (EC 5.3.3.-)
          Length = 328

 Score = 34.7 bits (78), Expect = 0.092
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ ++L RP  RNA+ K   + +    +K+  D     V++ S   K+F AG DL
Sbjct: 67  VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAGVDL 120

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>ECH1_HUMAN (Q13011) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial|
           precursor (EC 5.3.3.-)
          Length = 328

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           ++ ++L RP  RNA+ K   + +    +K+  D     V++ S   K+F AG DL
Sbjct: 67  VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVI-SGAGKMFTAGIDL 120

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>ECHH_RHOCA (P24162) Probable enoyl-CoA hydratase (EC 4.2.1.17)|
          Length = 257

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 244 GIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           G+  + L+RPE  NA+   M   L +A+ +   +  A +VL  S   + FC+G DL
Sbjct: 13  GLAVITLDRPEVMNALNAAMRHELTAALHRARGEARA-IVLTGSG--RAFCSGQDL 65

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>ECHP_CAVPO (P55100) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 725

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           +RL  P   NAI   ++ G++  + K  +D T   +++ S    +FCAGAD+
Sbjct: 13  IRLRNPPV-NAISPAVIHGIKEGLQKAMSDYTIKGIVI-SGANNIFCAGADI 62

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>CAID_PROSL (Q8GB17) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           ++E+ L+RP+A NAI  +    +     +   DP+  V ++  +  + FCAG DL+
Sbjct: 12  VLEIILDRPKA-NAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLK 66

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>ECHM_HUMAN (P30084) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)|
           (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA
           hydratase 1)
          Length = 290

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           ++L RP+A NA+   ++  L  A+     DP    +++     K F AGAD+++
Sbjct: 50  IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGG-DKAFAAGADIKE 102

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>PKSH_BACSU (P40805) Putative polyketide biosynthesis enoyl-CoA hydratase|
           homolog pksH
          Length = 259

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +1

Query: 241 SGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           + +  +   RPEA N I   +++     +++   + +   V+V   +P+VFC GAD ++
Sbjct: 15  ASVCYITFHRPEANNTINDTLIEECLQVLNQ--CETSTVTVVVLEGLPEVFCFGADFQE 71

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>ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 721

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           +RL  P   NA+   +++ +R+ + K G+D T   +++  +    FCAGAD+
Sbjct: 13  IRLCNPPV-NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGN-FCAGADI 62

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>PECI_MOUSE (Q9WUR2) Peroxisomal 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8)|
           (Dodecenoyl-CoA isomerase) (Delta(3),delta(2)-enoyl-CoA
           isomerase) (D3,D2-enoyl-CoA isomerase)
          Length = 358

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           + GI ++   RP  +NAI  +M + +  A+     D T  V+ V +     +C+G DL
Sbjct: 112 EDGITKITFNRPTKKNAISFQMYRDIILALKNASTDNT--VMAVFTGTGDYYCSGNDL 167

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>ECHM_PONPY (Q5R646) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)|
           (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA
           hydratase 1)
          Length = 290

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 256 LRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLRK 417
           ++L RP+A NA+   ++  L  A+     DP    +++     K F AGAD+++
Sbjct: 50  IQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGG-DKAFAAGADIKE 102

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>CRT_CLOAB (P52046) 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) (Crotonase)|
          Length = 261

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           +  + + RP+A NA+  + LK +   + ++  D     V++  +  K F AGAD+
Sbjct: 14  VAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADI 68

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>EFTS_HUMAN (P43897) Elongation factor Ts, mitochondrial precursor (EF-Ts)|
           (EF-TsMt)
          Length = 325

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -1

Query: 360 DVGRRVGPHLVHGAPQPLEHL--LPDGVPGLRPL-QPQLHDPGVGRRELVEADGV 205
           DVGRR+G H+V  AP  +  L   P G    + L QP L DP +   + V+  GV
Sbjct: 251 DVGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYLLDPSITLGQYVQPQGV 305

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>EFTS_RAT (Q9QYU2) Elongation factor Ts, mitochondrial precursor (EF-Ts)|
           (EF-TsMt) (2A3-2)
          Length = 324

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -1

Query: 360 DVGRRVGPHLVHGAPQPLEHL--LPDGVPGLRPL-QPQLHDPGVGRRELVEADGV 205
           +VGRR+G H+V  AP  +  L   P G    R L QP L DP +   + V+  GV
Sbjct: 250 EVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLPQPYLLDPSITLGQYVQPQGV 304

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>EFTS_MOUSE (Q9CZR8) Elongation factor Ts, mitochondrial precursor (EF-Ts)|
           (EF-TsMt)
          Length = 324

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -1

Query: 360 DVGRRVGPHLVHGAPQPLEHL--LPDGVPGLRPL-QPQLHDPGVGRRELVEADGV 205
           +VGRR+G H+V  AP  +  L   P G    R L QP L DP +   + V+  GV
Sbjct: 250 EVGRRLGQHVVGMAPLSVGSLDDEPGGETETRMLPQPYLLDPSITLGQYVQPQGV 304

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>CAID_SALTY (Q8ZRX5) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           I+E+ L+RP+A NAI  +    +  A      DP   V ++     K F AG DL+
Sbjct: 12  ILEITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLK 66

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>CAID_SALTI (Q8Z9L5) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           I+E+ L+RP+A NAI  +    +  A      DP   V ++     K F AG DL+
Sbjct: 12  ILEITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLK 66

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>PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2109

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 374  LATNTTLAVGSAPTLSMALRSPLSISFPMAFLASGRSSLSSTIPESGGES 225
            L T+  + V + PT+S  L    +++FP  F  SG  S S  +  SGG S
Sbjct: 1310 LVTSDLVEVVTRPTVSQELGGETAVTFPYVFGPSGEGSASGDL--SGGAS 1357

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>TREA_RABIT (P19813) Trehalase precursor (EC 3.2.1.28) (Alpha,alpha-trehalase)|
           (Alpha,alpha-trehalose glucohydrolase)
          Length = 578

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = -2

Query: 392 KTLGTEL---ATNTTLAVGSAPTLSMALRSPLSISFPMAFLASGRSSLSSTIPESGGESL 222
           +TL  EL   A N T++V S        R  +    P     S  + L+ T+PE   E+L
Sbjct: 249 ETLALELDFWAENRTISVSSGGNSHTLNRYHVPYGGPRPESYSKDTELAHTLPEGSWETL 308

Query: 221 WRRTGSGWERIW 186
           W    +G E  W
Sbjct: 309 WAELKAGAESGW 320

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>CYSQ_HAEIN (P44332) Protein cysQ homolog|
          Length = 228

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
 Frame = -2

Query: 377 ELATNTT-------LAVGSAPTLSMALRSPLSISFPMAFLASGRSSLSSTIPESGGESLW 219
           +L  NTT       +AVG A T    +RS L   FP  F+  G SSL S +   G    +
Sbjct: 107 KLTKNTTNFDRPLRIAVG-ATTSQEKVRSILPKDFPCEFVVVGSSSLKSGLVAEGAVDCY 165

Query: 218 RRTGSGWERIWRARAKRTLWGD 153
            R G   E  W       L G+
Sbjct: 166 VRLGQTGE--WDTAGAEVLLGE 185

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>EFTS_BOVIN (P43896) Elongation factor Ts, mitochondrial precursor (EF-Ts)|
           (EF-TsMt)
          Length = 338

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -1

Query: 360 DVGRRVGPHLVHGAPQPLEHL--LPDGVPGLRPL-QPQLHDPGVGRRELVEADGV 205
           D+GRR+G H+V  AP  +  L   P G    + L QP L DP +   + V+  GV
Sbjct: 264 DLGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYLLDPSITLGQYVQPHGV 318

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>Y124_AQUAE (O66524) UPF0109 protein aq_124|
          Length = 79

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 181 ALQILSQPDPVRLHKLSPPDSGIVELRLERPEARNAIGKE--MLKGLRSAMDKVGADPTA 354
           A +++   D VR+ ++    + ++ELR++  E    IGK+  + + LR+ +  +G     
Sbjct: 12  AKELVDNKDKVRVTEIEGEKTVVIELRVDPAELGKVIGKQGRIARALRTILTAIGRKIGK 71

Query: 355 NVVL 366
            VVL
Sbjct: 72  RVVL 75

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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 407  SAPAQKTLGTELATNTTLAVGSAPTLSMA--LRSPLSISFPMAFLASGRSSLSSTIPESG 234
            SAP   T  T L T       S PTLS    L S  + S PM+   S   + SS +PE  
Sbjct: 1453 SAPPPTTAATPLPT-------SFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKP 1505

Query: 233  GES 225
            G+S
Sbjct: 1506 GDS 1508

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>YKB4_CAEEL (P41942) Hypothetical protein B0272.4 in chromosome III|
          Length = 255

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +1

Query: 226 LSPPDSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGA 405
           L+   + ++ + L RP+  NA+ ++M   L +  +    D     V+      K +CAG+
Sbjct: 7   LTERKNNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGS 66

Query: 406 D 408
           D
Sbjct: 67  D 67

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>ECHA_HUMAN (P40939) Trifunctional enzyme alpha subunit, mitochondrial|
           precursor (TP-alpha) (78 kDa gastrin-binding protein)
           [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17);
           Long chain 3-hydroxyacyl-CoA dehydrogenase (EC
           1.1.1.211)]
          Length = 763

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 247 IVELRLERPEAR-NAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           +  +R+  P ++ N + KE+       M+++ A       ++ SS P  F AGAD+
Sbjct: 49  VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADI 104

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>SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequence-specific|
           single-stranded-DNA-binding protein) (Lck-associated
           signal transducer)
          Length = 388

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = -1

Query: 381 HGARDQHDVGRRVGPHL-------VHGAPQP---LEHLLPDGVPGLRPLQPQLHDP 244
           H     H+    +GPH          G P+P   + +  P GVPG +PL P   DP
Sbjct: 132 HAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDP 187

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>SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequence-specific|
           single-stranded-DNA-binding protein)
          Length = 388

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = -1

Query: 381 HGARDQHDVGRRVGPHL-------VHGAPQP---LEHLLPDGVPGLRPLQPQLHDP 244
           H     H+    +GPH          G P+P   + +  P GVPG +PL P   DP
Sbjct: 132 HAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDP 187

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>CAID_SHIFL (P59395) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           +  I+E+ L+RP+A NAI  +    +         DP   V ++  +  K F AG DL+
Sbjct: 9   NGSILEITLDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK 66

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>CAID_ECOLI (P31551) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           +  I+E+ L+RP+A NAI  +    +         DP   V ++  +  K F AG DL+
Sbjct: 9   NGSILEITLDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK 66

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>CAID_ECOL6 (Q8FLA6) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           +  I+E+ L+RP+A NAI  +    +         DP   V ++  +  K F AG DL+
Sbjct: 9   NGSILEITLDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK 66

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>CAID_ECO57 (Q8XA35) Carnitinyl-CoA dehydratase (EC 4.2.1.-)|
           (Crotonobetainyl-CoA hydratase)
          Length = 260

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADLR 414
           +  I+E+ L+RP+A NAI  +    +         DP   V ++  +  K F AG DL+
Sbjct: 9   NGSILEITLDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLK 66

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>ECHA_PIG (Q29554) Trifunctional enzyme alpha subunit, mitochondrial|
           precursor (TP-alpha) (78 kDa gastrin-binding protein)
           [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17);
           Long chain 3-hydroxyacyl-CoA dehydrogenase (EC
           1.1.1.211)]
          Length = 763

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 247 IVELRLERPEAR-NAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           +  +R+  P ++ N +G+E+       M++V +       ++ SS P  F AGAD+
Sbjct: 49  VAVIRINSPNSKVNTLGQELHSEFIEVMNEVWSSSQIRSAVLISSKPGCFIAGADI 104

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>PECI_HUMAN (O75521) Peroxisomal 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8)|
           (Dodecenoyl-CoA isomerase) (Delta(3),delta(2)-enoyl-CoA
           isomerase) (D3,D2-enoyl-CoA isomerase) (DBI-related
           protein 1) (DRS-1) (Hepatocellular carcinoma-associated
           antigen 88) (NY
          Length = 359

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 238 DSGIVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGADL 411
           + GI ++   RP+ +NAI  EM   +  A+     D +   VL  +     + +G DL
Sbjct: 112 EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNG--DYYSSGNDL 167

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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/46 (34%), Positives = 18/46 (39%)
 Frame = -1

Query: 414  PEVSARAEDLGHGARDQHDVGRRVGPHLVHGAPQPLEHLLPDGVPG 277
            P  S R + LG G  DQ + G         G P P   LL    PG
Sbjct: 2597 PASSDRLQQLGGGETDQGEKGSTTAESEASGPPSPQSPLLEKVAPG 2642

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>MENB_CYACA (Q9TM10) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 268

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +1

Query: 247 IVELRLERPEARNAIGKEMLKGLRSAMDKVGADPTANVVLVASSVPKVFCAGAD 408
           I E+ + RP+  NA     +  + +A      D +  VV+++    + FC G D
Sbjct: 20  ISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVILSGHGSRAFCVGGD 73

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>EMPA_VIBAN (P43147) Virulence metalloprotease precursor (EC 3.4.24.-)|
           (Vibriolysin)
          Length = 611

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 408 VSARAEDLGHGARDQHDVGRRVGPHLVHGAPQPLEHLLPDGVP 280
           V+  A+DLG+   D  D   +VG +   G   P E++L  G P
Sbjct: 478 VAKAAQDLGYNKADVVDAFNQVGVNASCGVVPPTENVLEKGKP 520

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>TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2|
          Length = 767

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -2

Query: 344 SAPTLSMALRSPLSISFPM--AFLASGRSSLSSTIPESG 234
           +APT S+ALRSPL++S P   +F     S+L+  +   G
Sbjct: 356 AAPTDSIALRSPLTLSSPFTSSFSLGSHSTLNGDLSMPG 394

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>YHO5_YEAST (P38803) Hypothetical 37.9 kDa protein in STE12-NAM8 intergenic|
           region
          Length = 334

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 399 RAEDLGHGARDQHDVGRRVGPHLVHGAPQPLEHL 298
           RA   G  A    D G    P+L+   PQP EHL
Sbjct: 227 RARSDGDTAETTEDSGTLRNPYLIPDYPQPFEHL 260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,808,709
Number of Sequences: 219361
Number of extensions: 652040
Number of successful extensions: 3148
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result