ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467100.1| Oryza sativa (japonica cultivar-group), mRNA 254 2e-64
2dbj|AK101814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 2e-64
3emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 180 2e-42
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
5dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
6ref|XM_467099.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
7dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
8gb|AY022793.1| Oryza sativa microsatellite MRG5118 containing (C... 48 0.023
9emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 48 0.023
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
11dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
12dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
13dbj|AK120139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.36
15gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, com... 44 0.36
16ref|XM_540214.2| PREDICTED: Canis familiaris similar to semaphor... 42 1.4
17dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 42 1.4
18gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.4
19dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 42 1.4
20dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.4
21gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete... 42 1.4
22gb|AC140457.3| Mus musculus BAC clone RP23-15F7 from 12, complet... 42 1.4
23ref|XM_511521.1| PREDICTED: Pan troglodytes similar to Serine/th... 40 5.6
24ref|NM_196880.1| Oryza sativa (japonica cultivar-group) putative... 40 5.6
25ref|XM_476645.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
26gb|AY795970.1| Homo sapiens Fanconi anemia, complementation grou... 40 5.6
27gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, c... 40 5.6
28gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 40 5.6
29ref|XM_413937.1| PREDICTED: Gallus gallus similar to KIAA1561 pr... 40 5.6
30ref|XM_362642.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 5.6
31ref|XM_867416.1| PREDICTED: Bos taurus similar to WNK lysine def... 40 5.6
32ref|NM_032387.3| Homo sapiens WNK lysine deficient protein kinas... 40 5.6
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.6
34gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retro... 40 5.6
35ref|XM_548082.2| PREDICTED: Canis familiaris similar to WNK lysi... 40 5.6
36gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, comple... 40 5.6
37gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 5.6
38emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on ch... 40 5.6
39emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 40 5.6
40emb|AJ315730.1|SNO315730 Streptomyces noursei npsB gene for nour... 40 5.6
41gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 40 5.6
42gb|AF390018.1|AF390018 Homo sapiens putative protein kinase WNK4... 40 5.6
43gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659... 40 5.6
44dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
47gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, comple... 40 5.6
48gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosom... 40 5.6
49gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, com... 40 5.6
50gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, co... 40 5.6
51dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
52dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.6
53emb|AJ316534.1|HSA316534 Homo sapiens mRNA for serine/threonine ... 40 5.6
54emb|AJ322758.1|HSA322758 Homo sapiens genomic sequence surroundi... 40 5.6
55gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, compl... 40 5.6
56emb|AJ309861.1|HSA309861 Homo sapiens partial mRNA for putative ... 40 5.6
57gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 40 5.6
58gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence 40 5.6
59gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 40 5.6
60gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence 40 5.6
61gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.6
62gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.6
63gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
64gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.6
65gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, comple... 40 5.6 
>ref|XM_467100.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1137

 Score =  254 bits (128), Expect = 2e-64
 Identities = 215/244 (88%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctcttcgcccgggccctccagatcctctcccagccggaccccgtccgcctccacaagctc 228
           |||||| |||| |||||||| |||||| |||||| ||| |||||||||||||| ||||||
Sbjct: 141 ctcttctcccgcgccctccaaatcctcgcccagcaggagcccgtccgcctccagaagctc 200

                                                                       
Query: 229 tcgccgcccgactccgggatcgtggagctgaggctggagcggccggaggccaggaacgcc 288
           ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tcggcgcccgactccgggatcgtggagatgaggctggagcggccggaggccaggaacgcc 260

                                                                       
Query: 289 atcgggaaggagatgctcaaggggctgcggagcgccatggacaaggtgggggccgacccg 348
           ||||||| |||||||||| ||||| |||||||||| || || ||||||  ||| ||| ||
Sbjct: 261 atcgggagggagatgctccaggggttgcggagcgcgatcgagaaggtgaaggctgacgcg 320

                                                                       
Query: 349 acggccaacgtcgtgttggtcgcgagctccgtgcccaaggtcttctgcgcgggcgctgac 408
           ||||| || |||||| || | ||||||||||| || ||||| |||||||| |||||||| 
Sbjct: 321 acggcgaaagtcgtgctgctggcgagctccgtcccgaaggttttctgcgctggcgctgat 380

               
Query: 409 ctca 412
           ||||
Sbjct: 381 ctca 384



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                       
Query: 76  atgcgcagcctccggggcctcctcgccgtctccggccacctcgccgcccgccacgcgccg 135
           ||||||| |||||||||  ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 60  atgcgcatcctccggggaatcctcgccgtctccggccacctcgccggccgccgcgcgccg 119
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>dbj|AK101814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A05, full
           insert sequence
          Length = 1137

 Score =  254 bits (128), Expect = 2e-64
 Identities = 215/244 (88%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctcttcgcccgggccctccagatcctctcccagccggaccccgtccgcctccacaagctc 228
           |||||| |||| |||||||| |||||| |||||| ||| |||||||||||||| ||||||
Sbjct: 141 ctcttctcccgcgccctccaaatcctcgcccagcaggagcccgtccgcctccagaagctc 200

                                                                       
Query: 229 tcgccgcccgactccgggatcgtggagctgaggctggagcggccggaggccaggaacgcc 288
           ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tcggcgcccgactccgggatcgtggagatgaggctggagcggccggaggccaggaacgcc 260

                                                                       
Query: 289 atcgggaaggagatgctcaaggggctgcggagcgccatggacaaggtgggggccgacccg 348
           ||||||| |||||||||| ||||| |||||||||| || || ||||||  ||| ||| ||
Sbjct: 261 atcgggagggagatgctccaggggttgcggagcgcgatcgagaaggtgaaggctgacgcg 320

                                                                       
Query: 349 acggccaacgtcgtgttggtcgcgagctccgtgcccaaggtcttctgcgcgggcgctgac 408
           ||||| || |||||| || | ||||||||||| || ||||| |||||||| |||||||| 
Sbjct: 321 acggcgaaagtcgtgctgctggcgagctccgtcccgaaggttttctgcgctggcgctgat 380

               
Query: 409 ctca 412
           ||||
Sbjct: 381 ctca 384



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                       
Query: 76  atgcgcagcctccggggcctcctcgccgtctccggccacctcgccgcccgccacgcgccg 135
           ||||||| |||||||||  ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 60  atgcgcatcctccggggaatcctcgccgtctccggccacctcgccggccgccgcgcgccg 119
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score =  180 bits (91), Expect = 2e-42
 Identities = 154/175 (88%)
 Strand = Plus / Plus

                                                                          
Query: 238    gactccgggatcgtggagctgaggctggagcggccggaggccaggaacgccatcgggaag 297
              ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 127312 gactcagggatcgtggagatgaggctggagcggccggaggccaggaacgccatcgggagg 127371

                                                                          
Query: 298    gagatgctcaaggggctgcggagcgccatggacaaggtgggggccgacccgacggccaac 357
              ||||||||| ||||| |||||||||| || || ||||||  ||| ||| ||||||| |||
Sbjct: 127372 gagatgctccaggggttgcggagcgcgatcgagaaggtgaaggctgacgcgacggcgaac 127431

                                                                     
Query: 358    gtcgtgttggtcgcgagctccgtgcccaaggtcttctgcgcgggcgctgacctca 412
              |||||| || | ||||||||||| || ||||| |||||||| |||||||| ||||
Sbjct: 127432 gtcgtgctgctggcgagctccgtcccgaaggttttctgcgctggcgctgatctca 127486



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                          
Query: 169    ctcttcgcccgggccctccagatcctctcccagccggaccccgtccgcctccacaagctc 228
              |||||| |||| |||||||| |||||| |||||| ||| |||||||||||||| ||||||
Sbjct: 127145 ctcttctcccgcgccctccaaatcctcgcccagcaggagcccgtccgcctccagaagctc 127204

                               
Query: 229    tcgccgcccgactccgg 245
              ||| |||||||||||||
Sbjct: 127205 tcggcgcccgactccgg 127221



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                          
Query: 76     atgcgcagcctccggggcctcctcgccgtctccggccacctcgccgcccgccacgcgccg 135
              ||||||| |||||| ||  ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 127064 atgcgcatcctccgtggaatcctcgccgtctccggccacctcgccggccgccgcgcgccg 127123



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 247    atcgtggagctgaggctggagcggccggaggccaggaacgccatc 291
              ||||| ||||||||||||||||| ||||||| || ||||||||||
Sbjct: 123499 atcgtagagctgaggctggagcgtccggaggtcaagaacgccatc 123543



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 201    gccggaccccgtccgcctccacaagctctcgccgcccgact 241
              |||||| |||||| | ||||||||||||||| | |||||||
Sbjct: 122595 gccggatcccgtcagtctccacaagctctcggcacccgact 122635
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  172 bits (87), Expect = 6e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                            
Query: 238      gactccgggatcgtggagctgaggctggagcggccggaggccaggaacgccatcgggaag 297
                ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 26405297 gactcagggatcgtggagatgaggctggagcggccggaggccaggaacgccatcgggagg 26405356

                                                                            
Query: 298      gagatgctcaaggggctgcggagcgccatggacaaggtgggggccgacccgacggccaac 357
                ||||||||| ||||| |||||||||| || || ||||||  ||| ||| ||||||| || 
Sbjct: 26405357 gagatgctccaggggttgcggagcgcgatcgagaaggtgaaggctgacgcgacggcgaaa 26405416

                                                                       
Query: 358      gtcgtgttggtcgcgagctccgtgcccaaggtcttctgcgcgggcgctgacctca 412
                |||||| || | ||||||||||| || ||||| |||||||| |||||||| ||||
Sbjct: 26405417 gtcgtgctgctggcgagctccgtcccgaaggttttctgcgctggcgctgatctca 26405471



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 169      ctcttcgcccgggccctccagatcctctcccagccggaccccgtccgcctccacaagctc 228
                |||||| |||| |||||||| |||||| |||||| ||| |||||||||||||| ||||||
Sbjct: 26405133 ctcttctcccgcgccctccaaatcctcgcccagcaggagcccgtccgcctccagaagctc 26405192

                                 
Query: 229      tcgccgcccgactccgg 245
                ||| |||||||||||||
Sbjct: 26405193 tcggcgcccgactccgg 26405209



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 76       atgcgcagcctccggggcctcctcgccgtctccggccacctcgccgcccgccacgcgccg 135
                ||||||| |||||||||  ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 26405052 atgcgcatcctccggggaatcctcgccgtctccggccacctcgccggccgccgcgcgccg 26405111



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 247      atcgtggagctgaggctggagcggccggaggccaggaacgccatc 291
                ||||| ||||||||||||||||| ||||||| || ||||||||||
Sbjct: 26401479 atcgtagagctgaggctggagcgtccggaggtcaagaacgccatc 26401523



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 201      gccggaccccgtccgcctccacaagctctcgccgcccgact 241
                |||||| |||||| | ||||||||||||||| | |||||||
Sbjct: 26400578 gccggatcccgtcagtctccacaagctctcggcacccgact 26400618
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>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1003_B06
          Length = 131956

 Score =  172 bits (87), Expect = 6e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                        
Query: 238  gactccgggatcgtggagctgaggctggagcggccggaggccaggaacgccatcgggaag 297
            ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5213 gactcagggatcgtggagatgaggctggagcggccggaggccaggaacgccatcgggagg 5272

                                                                        
Query: 298  gagatgctcaaggggctgcggagcgccatggacaaggtgggggccgacccgacggccaac 357
            ||||||||| ||||| |||||||||| || || ||||||  ||| ||| ||||||| || 
Sbjct: 5273 gagatgctccaggggttgcggagcgcgatcgagaaggtgaaggctgacgcgacggcgaaa 5332

                                                                   
Query: 358  gtcgtgttggtcgcgagctccgtgcccaaggtcttctgcgcgggcgctgacctca 412
            |||||| || | ||||||||||| || ||||| |||||||| |||||||| ||||
Sbjct: 5333 gtcgtgctgctggcgagctccgtcccgaaggttttctgcgctggcgctgatctca 5387



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 169  ctcttcgcccgggccctccagatcctctcccagccggaccccgtccgcctccacaagctc 228
            |||||| |||| |||||||| |||||| |||||| ||| |||||||||||||| ||||||
Sbjct: 5049 ctcttctcccgcgccctccaaatcctcgcccagcaggagcccgtccgcctccagaagctc 5108

                             
Query: 229  tcgccgcccgactccgg 245
            ||| |||||||||||||
Sbjct: 5109 tcggcgcccgactccgg 5125



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                        
Query: 76   atgcgcagcctccggggcctcctcgccgtctccggccacctcgccgcccgccacgcgccg 135
            ||||||| |||||||||  ||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 4968 atgcgcatcctccggggaatcctcgccgtctccggccacctcgccggccgccgcgcgccg 5027



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 247  atcgtggagctgaggctggagcggccggaggccaggaacgccatc 291
            ||||| ||||||||||||||||| ||||||| || ||||||||||
Sbjct: 1395 atcgtagagctgaggctggagcgtccggaggtcaagaacgccatc 1439



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 201 gccggaccccgtccgcctccacaagctctcgccgcccgact 241
           |||||| |||||| | ||||||||||||||| | |||||||
Sbjct: 494 gccggatcccgtcagtctccacaagctctcggcacccgact 534
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>ref|XM_467099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 810

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 201 gccggaccccgtccgcctccacaagctctcgccgcccgactccgggatcgtggagctgag 260
           |||||| |||||| | ||||||||||||||| | ||||||| ||  ||||| ||||||||
Sbjct: 93  gccggatcccgtcagtctccacaagctctcggcacccgactgcgaaatcgtagagctgag 152

                                          
Query: 261 gctggagcggccggaggccaggaacgccatc 291
           ||||||||| ||||||| || ||||||||||
Sbjct: 153 gctggagcgtccggaggtcaagaacgccatc 183
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:P0491E01
          Length = 136150

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 247    atcgtggagctgaggctggagcggccggaggccaggaacgccatc 291
              ||||| ||||||||||||||||| ||||||| || ||||||||||
Sbjct: 133831 atcgtagagctgaggctggagcgtccggaggtcaagaacgccatc 133875



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 201    gccggaccccgtccgcctccacaagctctcgccgcccgact 241
              |||||| |||||| | ||||||||||||||| | |||||||
Sbjct: 132930 gccggatcccgtcagtctccacaagctctcggcacccgact 132970
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>gb|AY022793.1| Oryza sativa microsatellite MRG5118 containing (CGC)X8, genomic
           sequence
          Length = 224

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 96  cctcgccgtctccggccacctcgccgcc 123
           |||||||||| |||||||||||||||||
Sbjct: 80  cctcgccgtcgccggccacctcgccgcc 107
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 123    ccgccacgcgccgccgagcggcgc 146
              ||||||||||||||||||||||||
Sbjct: 204477 ccgccacgcgccgccgagcggcgc 204500
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 96       cctcgccgtctccggccacctcgccgcc 123
                |||||||||| |||||||||||||||||
Sbjct: 21115096 cctcgccgtcgccggccacctcgccgcc 21115123
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>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144D11
          Length = 157943

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 96    cctcgccgtctccggccacctcgccgcc 123
             |||||||||| |||||||||||||||||
Sbjct: 82641 cctcgccgtcgccggccacctcgccgcc 82668
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>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1064G04
          Length = 186704

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 96    cctcgccgtctccggccacctcgccgcc 123
             |||||||||| |||||||||||||||||
Sbjct: 12605 cctcgccgtcgccggccacctcgccgcc 12632
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>dbj|AK120139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027M08, full
           insert sequence
          Length = 2601

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 96  cctcgccgtctccggccacctcgccgcc 123
           |||||||||| |||||||||||||||||
Sbjct: 94  cctcgccgtcgccggccacctcgccgcc 121
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 266     agcggccggaggccaggaacgc 287
               ||||||||||||||||||||||
Sbjct: 3340790 agcggccggaggccaggaacgc 3340811



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 34/37 (91%), Gaps = 2/37 (5%)
 Strand = Plus / Plus

                                                   
Query: 117    cgccgcccgccacgcgccgccgagcggcgccgcctcg 153
              |||||||||||  ||||||||| ||||||||||||||
Sbjct: 916145 cgccgcccgcc--gcgccgccgcgcggcgccgcctcg 916179



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 109     ggccacctcgccgcccgccac 129
               |||||||||||||||||||||
Sbjct: 2291327 ggccacctcgccgcccgccac 2291347



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 111     ccacctcgccgcccgccacgcgcc 134
               ||||||||||||||||| ||||||
Sbjct: 4634469 ccacctcgccgcccgccgcgcgcc 4634492
to top
>gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, complete sequence
          Length = 212430

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 8      actctgcctctgactctgctcttttc 33
              |||| |||||||||||||||||||||
Sbjct: 103822 actcagcctctgactctgctcttttc 103847
to top
>ref|XM_540214.2| PREDICTED: Canis familiaris similar to semaphorin W (LOC483098),
           mRNA
          Length = 4485

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 78  gcgcagcctccggggcctcctcgccgtct 106
           ||||||||||||||||| ||||| |||||
Sbjct: 536 gcgcagcctccggggccgcctcggcgtct 564
to top
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 391     ttctgcgcgggcgctgacctc 411
               |||||||||||||||||||||
Sbjct: 1456825 ttctgcgcgggcgctgacctc 1456845
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    caaggtcttctgcgcgggcgc 404
              |||||||||||||||||||||
Sbjct: 642618 caaggtcttctgcgcgggcgc 642638
to top
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    gcctccggggcctcctcgccg 103
             |||||||||||||||||||||
Sbjct: 55480 gcctccggggcctcctcgccg 55500
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 238     gactccgggatcgtggagctg 258
               |||||||||||||||||||||
Sbjct: 2205674 gactccgggatcgtggagctg 2205654
to top
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence
          Length = 232605

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    gcctccggggcctcctcgccg 103
             |||||||||||||||||||||
Sbjct: 17427 gcctccggggcctcctcgccg 17447
to top
>gb|AC140457.3| Mus musculus BAC clone RP23-15F7 from 12, complete sequence
          Length = 215722

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     tgactctgcctctgactctgc 26
             |||||||||||||||||||||
Sbjct: 27103 tgactctgcctctgactctgc 27123



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     tgactctgcctctgactctgc 26
             |||||||||||||||||||||
Sbjct: 27091 tgactctgcctctgactctgc 27111
to top
>ref|XM_511521.1| PREDICTED: Pan troglodytes similar to Serine/threonine-protein kinase
            WNK4 (Protein kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4) (Ac2-059) (LOC454699), mRNA
          Length = 4713

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  ggagatgctcaaggggctgc 316
            ||||||||||||||||||||
Sbjct: 1413 ggagatgctcaaggggctgc 1432
to top
>ref|NM_196880.1| Oryza sativa (japonica cultivar-group) putative glycopeptide
           (OSJNBa0042E19.33), mRNA
          Length = 618

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 cgccgcccgccacgcgccgc 136
           ||||||||||||||||||||
Sbjct: 560 cgccgcccgccacgcgccgc 579
to top
>ref|XM_476645.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1779

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 111 ccacctcgccgcccgccacgcgccgccg 138
           |||||||||||||| || ||||||||||
Sbjct: 168 ccacctcgccgccctccgcgcgccgccg 195
to top
>gb|AY795970.1| Homo sapiens Fanconi anemia, complementation group G (FANCG) gene,
            complete cds
          Length = 8985

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   actctcgcccgcctctccgc 74
            ||||||||||||||||||||
Sbjct: 8819 actctcgcccgcctctccgc 8800
to top
>gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, complete sequence
          Length = 155372

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  atgctcaaggggctgcggag 320
            ||||||||||||||||||||
Sbjct: 8474 atgctcaaggggctgcggag 8455
to top
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
             sequence
          Length = 139771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    cgcccgcctctccgctatgc 79
             ||||||||||||||||||||
Sbjct: 28114 cgcccgcctctccgctatgc 28133
to top
>ref|XM_413937.1| PREDICTED: Gallus gallus similar to KIAA1561 protein (LOC415569),
            mRNA
          Length = 7119

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  gtggagctgaggctggagcg 269
            ||||||||||||||||||||
Sbjct: 1817 gtggagctgaggctggagcg 1798
to top
>ref|XM_362642.1| Magnaporthe grisea 70-15 predicted protein (MG08407.4) partial mRNA
          Length = 321

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 92  gcctcctcgccgtctccggccacctcgccgcc 123
           |||||||||||||| |||||| | ||||||||
Sbjct: 23  gcctcctcgccgtcgccggcctcgtcgccgcc 54
to top
>ref|XM_867416.1| PREDICTED: Bos taurus similar to WNK lysine deficient protein
           kinase 4 (LOC615567), mRNA
          Length = 3701

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 381 ggagatgctcaaggggctgc 400
to top
>ref|NM_032387.3| Homo sapiens WNK lysine deficient protein kinase 4 (WNK4), mRNA
          Length = 4147

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 687 ggagatgctcaaggggctgc 706
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 60       cgcccgcctctccgctatgc 79
                ||||||||||||||||||||
Sbjct: 21859702 cgcccgcctctccgctatgc 21859683
to top
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1,
             xilon1 retrotransposon, helitron B73_14578, gypsy
             retrotransposon huck1 and ruda retrotransposon, complete
             sequence
          Length = 152384

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ccgtctccggccacctcgcc 120
             ||||||||||||||||||||
Sbjct: 17263 ccgtctccggccacctcgcc 17244
to top
>ref|XM_548082.2| PREDICTED: Canis familiaris similar to WNK lysine deficient protein
           kinase 4 (LOC490959), mRNA
          Length = 3562

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 645 ggagatgctcaaggggctgc 664
to top
>gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, complete sequence
          Length = 73888

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   gcctccggggcctcctcgcc 102
            ||||||||||||||||||||
Sbjct: 1528 gcctccggggcctcctcgcc 1547
to top
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
              gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 143264 ccgtctccggccacctcgcc 143283



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 131403 ccgtctccggccacctcgcc 131422
to top
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a
             novel gene, the VCP gene for valosin-containing protein,
             the FANCG gene for Fanconi anemia, complementation group G
             (FAG, XRCC9), the gene for phosphatidylinositol glycan
             class O (PIGO), a novel gene, the STOML2 gene for stomatin
             (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539)
             (FLJ11560), a zinc finger protein pseudogene, the 5' end
             of the UNC13 gene for unc-13-like (C. elegans) (hmunc13)
             and nine CpG islands, complete sequence
          Length = 195102

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    actctcgcccgcctctccgc 74
             ||||||||||||||||||||
Sbjct: 42413 actctcgcccgcctctccgc 42432
to top
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
          Length = 223670

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 108  cggccacctcgccgcccgccacgc 131
            ||||||| ||||||||||||||||
Sbjct: 1829 cggccacatcgccgcccgccacgc 1852
to top
>emb|AJ315730.1|SNO315730 Streptomyces noursei npsB gene for nourseothricin peptidyl carrier
            protein
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  gccacctcgccgcccgccac 129
            ||||||||||||||||||||
Sbjct: 1957 gccacctcgccgcccgccac 1976
to top
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    cgccgcccgccacgcgccgc 136
              ||||||||||||||||||||
Sbjct: 107580 cgccgcccgccacgcgccgc 107561
to top
>gb|AF390018.1|AF390018 Homo sapiens putative protein kinase WNK4 (PRKWNK4) mRNA, complete
           cds
          Length = 3833

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 687 ggagatgctcaaggggctgc 706
to top
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence
          Length = 86765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    actctcgcccgcctctccgc 74
             ||||||||||||||||||||
Sbjct: 52605 actctcgcccgcctctccgc 52624
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      cgccgcccgccacgcgccgc 136
                ||||||||||||||||||||
Sbjct: 16489481 cgccgcccgccacgcgccgc 16489462
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 111     ccacctcgccgcccgccacgcgccgccg 138
               |||||||||||||| || ||||||||||
Sbjct: 2632825 ccacctcgccgccctccgcgcgccgccg 2632798
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 60       cgcccgcctctccgctatgc 79
                ||||||||||||||||||||
Sbjct: 21852731 cgcccgcctctccgctatgc 21852712
to top
>gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, complete sequence
          Length = 169408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     cctctgactctgctcttttc 33
              ||||||||||||||||||||
Sbjct: 105417 cctctgactctgctcttttc 105436
to top
>gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosome 7, complete sequence
          Length = 208516

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gcctccggggcctcctcgcc 102
             ||||||||||||||||||||
Sbjct: 36349 gcctccggggcctcctcgcc 36330
to top
>gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, complete sequence
          Length = 134465

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ggagatgctcaaggggctgc 316
              ||||||||||||||||||||
Sbjct: 120578 ggagatgctcaaggggctgc 120597
to top
>gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, complete sequence
          Length = 187723

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ggagatgctcaaggggctgc 316
             ||||||||||||||||||||
Sbjct: 48431 ggagatgctcaaggggctgc 48450
to top
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1027_G06
          Length = 121885

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 111   ccacctcgccgcccgccacgcgccgccg 138
             |||||||||||||| || ||||||||||
Sbjct: 58543 ccacctcgccgccctccgcgcgccgccg 58516
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 87      ccggggcctcctcgccgtctccgg 110
               ||||| ||||||||||||||||||
Sbjct: 1478585 ccgggtcctcctcgccgtctccgg 1478608
to top
>emb|AJ316534.1|HSA316534 Homo sapiens mRNA for serine/threonine protein kinase (PRKWNK4
           gene)
          Length = 3861

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 683 ggagatgctcaaggggctgc 702
to top
>emb|AJ322758.1|HSA322758 Homo sapiens genomic sequence surrounding NotI site, clone NR1-TG1C
          Length = 668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  gcctccggggcctcctcgcc 102
           ||||||||||||||||||||
Sbjct: 33  gcctccggggcctcctcgcc 52
to top
>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tgactctgcctctgactctg 25
              ||||||||||||||||||||
Sbjct: 122532 tgactctgcctctgactctg 122513
to top
>emb|AJ309861.1|HSA309861 Homo sapiens partial mRNA for putative protein kinase WNK4 (PRKWNK4
           gene)
          Length = 638

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ggagatgctcaaggggctgc 316
           ||||||||||||||||||||
Sbjct: 48  ggagatgctcaaggggctgc 67
to top
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 208176 ccgtctccggccacctcgcc 208157



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 188308 ccgtctccggccacctcgcc 188289
to top
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence
          Length = 282600

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 241077 ccgtctccggccacctcgcc 241058



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 229048 ccgtctccggccacctcgcc 229029
to top
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 196116 ccgtctccggccacctcgcc 196097



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 176365 ccgtctccggccacctcgcc 176346
to top
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 248076 ccgtctccggccacctcgcc 248057



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ccgtctccggccacctcgcc 120
              ||||||||||||||||||||
Sbjct: 236048 ccgtctccggccacctcgcc 236029
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     cgcgccgccgagcggcgccg 148
               ||||||||||||||||||||
Sbjct: 2670358 cgcgccgccgagcggcgccg 2670339
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 131     cgccgccgagcggcgccgcctcgt 154
               ||||||||| ||||||||||||||
Sbjct: 4243980 cgccgccgaacggcgccgcctcgt 4243957
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      cgccgcccgccacgcgccgc 136
                ||||||||||||||||||||
Sbjct: 16497722 cgccgcccgccacgcgccgc 16497703
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 87      ccggggcctcctcgccgtctccgg 110
               ||||| ||||||||||||||||||
Sbjct: 1153280 ccgggtcctcctcgccgtctccgg 1153303
to top
>gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, complete sequence
          Length = 198007

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    atgctcaaggggctgcggag 320
              ||||||||||||||||||||
Sbjct: 188114 atgctcaaggggctgcggag 188095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,154,623
Number of Sequences: 3902068
Number of extensions: 3154623
Number of successful extensions: 117557
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115919
Number of HSP's gapped (non-prelim): 1638
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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