ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60h02 |
|---|---|
| Clone Library Name | barley_pub |
>U2AF1_MOUSE (Q9D883) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor| 35 kDa subunit) (U2 snRNP auxiliary factor small subunit) Length = 238 Score = 135 bits (341), Expect = 4e-32 Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 1/119 (0%) Frame = +1 Query: 97 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPG 276 AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNKP+ S T+ L N+Y+ P + Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60 Query: 277 VDAQGNPINPVKIQGXXXXXXXXXXXXL-SKHGEVENLHVCDNLADHLIGXVYVQFREE 450 D ++ V++Q + K+GEVE ++VCDNL DHL+G VYV+FR E Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
>U2AF1_HUMAN (Q01081) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor| 35 kDa subunit) (U2 snRNP auxiliary factor small subunit) Length = 239 Score = 135 bits (341), Expect = 4e-32 Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 1/119 (0%) Frame = +1 Query: 97 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPG 276 AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNKP+ S T+ L N+Y+ P + Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60 Query: 277 VDAQGNPINPVKIQGXXXXXXXXXXXXL-SKHGEVENLHVCDNLADHLIGXVYVQFREE 450 D ++ V++Q + K+GEVE ++VCDNL DHL+G VYV+FR E Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
>U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 auxiliary factor| 38 kDa subunit) (U2 snRNP auxiliary factor small subunit) Length = 264 Score = 129 bits (324), Expect = 3e-30 Identities = 63/122 (51%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Frame = +1 Query: 94 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 273 MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HNKP+ S T+LL N+Y P Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60 Query: 274 GVDAQ---GNPINPVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFR 444 D N + + K+GE+E ++VCDNL DHL+G VY++FR Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120 Query: 445 EE 450 E Sbjct: 121 NE 122
>U2AF1_SCHPO (Q09176) Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor| 23 kDa subunit) (U2 snRNP auxiliary factor small subunit) (U2AF23) Length = 216 Score = 119 bits (298), Expect = 3e-27 Identities = 59/119 (49%), Positives = 75/119 (63%) Frame = +1 Query: 94 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 273 MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H KP+ S T+L NMY+ P Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH--- 57 Query: 274 GVDAQGNPINPVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFREE 450 + G ++ SK+GEVE L VCDN+ DHL+G VYV+F+ E Sbjct: 58 --EPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYE 114
>U2AF1_PIG (Q29350) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor| 35 kDa subunit) (U2 snRNP auxiliary factor small subunit) (Fragment) Length = 81 Score = 101 bits (251), Expect = 1e-21 Identities = 45/74 (60%), Positives = 56/74 (75%) Frame = +1 Query: 97 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPG 276 AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNKP+ S T++L N+Y+ P Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQT 60 Query: 277 VDAQGNPINPVKIQ 318 D ++ V++Q Sbjct: 61 ADGSHCHVSDVEVQ 74
>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) Length = 462 Score = 73.9 bits (180), Expect = 2e-13 Identities = 46/115 (40%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Frame = +1 Query: 127 EKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQ-------RPDMITPGVDA 285 EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ M+ R D P Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 229 Query: 286 QGNPINPVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFREE 450 + + +I G+V V NL HL G VYVQ++ E Sbjct: 230 E---FSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSE 281
>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) Length = 479 Score = 72.8 bits (177), Expect = 4e-13 Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Frame = +1 Query: 127 EKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQ-------RPDMITPGVDA 285 EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230 Query: 286 QGNPINPVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFREE 450 + + + G+V V NL HL G VYVQ++ E Sbjct: 231 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSE 282
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 72.8 bits (177), Expect = 4e-13 Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Frame = +1 Query: 127 EKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQ-------RPDMITPGVDA 285 EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225 Query: 286 QGNPINPVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFREE 450 + + + G+V V NL HL G VYVQ++ E Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSE 277
>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) (SP2) Length = 428 Score = 62.0 bits (149), Expect = 7e-10 Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 4/112 (3%) Frame = +1 Query: 127 EKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPIN- 303 EK R +CPFY K GACR G+RCSR H+ P+ SPTLL+ +M+ M D + N Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216 Query: 304 ---PVKIQGXXXXXXXXXXXXLSKHGEVENLHVCDNLADHLIGXVYVQFREE 450 + G+V V NL HL G VYVQ++ E Sbjct: 217 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSE 268
>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5| Length = 435 Score = 35.4 bits (80), Expect = 0.066 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%) Frame = +1 Query: 139 VNCPFYFKIGACRHGDRC----SRLHNKPSVSPTLLL-----------CNMYQRPDMITP 273 + C +YF+ G C++G+ C + HN P+ P L C Y R Sbjct: 152 MECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKF 211 Query: 274 GVDAQGNPINPVKIQG 321 G D + N +P I G Sbjct: 212 GSDCKFNHPDPTAIGG 227 Score = 30.0 bits (66), Expect = 2.8 Identities = 9/35 (25%), Positives = 18/35 (51%) Frame = +1 Query: 100 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH 204 + + ++ D +C FY + G+C++G C H Sbjct: 92 KRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNH 126
>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4| Length = 404 Score = 34.3 bits (77), Expect = 0.15 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +1 Query: 91 AMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVS-PTLLLCNMYQRPDMI 267 AMA L D+ C F+ G C++GD C H +S P L N + P Sbjct: 249 AMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLP--A 306 Query: 268 TPGVDAQGN 294 PG A GN Sbjct: 307 RPGQPACGN 315 Score = 29.6 bits (65), Expect = 3.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 145 CPFYFKIGACRHGDRCSRLHNKP 213 CP+Y + G CR G C H +P Sbjct: 141 CPYYLRTGTCRFGVACKFHHPQP 163
>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2| Length = 453 Score = 33.5 bits (75), Expect = 0.25 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = +1 Query: 88 AAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSV---SPTLLLCNMYQRP 258 A++A + S + +R C F+ G C++GD C H K + PTLL N P Sbjct: 248 ASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLL--NPIVLP 305 Query: 259 DMITPGVDAQGN 294 PG A GN Sbjct: 306 --ARPGQPACGN 315 Score = 30.0 bits (66), Expect = 2.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +1 Query: 145 CPFYFKIGACRHGDRCSRLHNKPSVSPT 228 CP+Y + G CR G C H P P+ Sbjct: 135 CPYYMQTGLCRFGVACKFHHPHPHSQPS 162
>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein| ZFN-like 6 Length = 448 Score = 33.1 bits (74), Expect = 0.33 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 15/76 (19%) Frame = +1 Query: 139 VNCPFYFKIGACRHGDRCSRLHNKPS---------------VSPTLLLCNMYQRPDMITP 273 ++C +YF+ G C++G+ C H P + P + C Y R Sbjct: 162 IDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKY 221 Query: 274 GVDAQGNPINPVKIQG 321 G + + N +P I G Sbjct: 222 GAECKFNHPDPTTIGG 237
>MKRN1_MACEU (Q9TT91) Makorin-1| Length = 478 Score = 31.6 bits (70), Expect = 0.95 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDM 264 Y++ G C +GDRC H KP + N+ + D+ Sbjct: 88 YYQRGCCAYGDRCRYEHTKPLKREEVTAANLAAKSDL 124 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G C+ G+ C H+ S S + ++C YQR Sbjct: 59 YFMHGVCKKGNNCRYSHDL-STSQSAMVCRYYQR 91
>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3| Length = 948 Score = 31.2 bits (69), Expect = 1.2 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 127 EKDRVNCPFYFKIGACRHGDRCSRLHNKPSVS 222 EK + C +Y + G C G+RC +H+ V+ Sbjct: 667 EKRKEYCMYYNRFGRCNRGERCPYIHDPEKVA 698
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G CR G RC H+ + P+ +C YQR Sbjct: 10 YFLHGVCREGSRCLFSHDLTTSKPS-TICKYYQR 42 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 124 TEKDRVNCPFYFKIGACRHGDRCSRLHNKP 213 T K C +Y + GAC +GDRC H KP Sbjct: 30 TSKPSTICKYYQR-GACAYGDRCRYDHIKP 58
>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)| Length = 482 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G C+ GD C H+ S SP ++C +QR Sbjct: 63 YFMHGVCKEGDNCRYSHDL-SDSPYSVVCKYFQR 95 Score = 29.3 bits (64), Expect = 4.7 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKP 213 YF+ G C +GDRC H+KP Sbjct: 92 YFQRGYCIYGDRCRYEHSKP 111
>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)| Length = 423 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G CR G RC H+ + P+ +C YQR Sbjct: 10 YFLHGVCREGSRCLFSHDLNNSKPS-TICKFYQR 42
>MKRN1_MOUSE (Q9QXP6) Makorin-1| Length = 481 Score = 30.4 bits (67), Expect = 2.1 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDM 264 YF+ G C +GDRC H+KP + ++ +P + Sbjct: 92 YFQRGYCVYGDRCRYEHSKPLKQEEVTATDLSAKPSL 128 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G C+ GD C H+ S SP ++C +QR Sbjct: 63 YFMHGVCKEGDNCRYSHDL-SDSPYGVVCKYFQR 95
>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1| Length = 397 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Frame = +1 Query: 70 GTNPG-----GAAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSP 225 G NPG G A ++F + C FY K G C+ G C H + +P Sbjct: 250 GYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAP 306
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING| finger protein 64) Length = 485 Score = 29.6 bits (65), Expect = 3.6 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKP 213 YF+ G C +GDRC H+KP Sbjct: 127 YFQRGCCVYGDRCRCEHSKP 146
>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 439 Score = 29.6 bits (65), Expect = 3.6 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = +1 Query: 112 SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPT 228 ++F D+ C +Y K G C+ G C H + PT Sbjct: 327 NVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPT 365 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/54 (22%), Positives = 22/54 (40%) Frame = +1 Query: 145 CPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPINP 306 C +Y K G C++G+ C + P++ ++G+PI P Sbjct: 177 CAYYLKTGQCKYGNTCK-----------------FHHPELFNAMASSRGSPIYP 213
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 468 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 3/52 (5%) Frame = +1 Query: 64 CEGTNPGGAAMAEHLASIFGTEKDRVN---CPFYFKIGACRHGDRCSRLHNK 210 C +P A E G +R C FY K G C+ G C H K Sbjct: 66 CRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPK 117 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +1 Query: 142 NCPFYFKIGACRHGDRCSRLH--NKPSVSPTLLLCNMY 249 +C +Y + G C +G+RC H ++ SV T+ Y Sbjct: 50 DCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQY 87
>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3| Length = 375 Score = 28.9 bits (63), Expect = 6.2 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Frame = +1 Query: 58 LFCEGTNPGGAAMAEHLA----SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSP 225 LF G + G + A ++F + C FY K G C+ G C H + +P Sbjct: 216 LFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP 275 Query: 226 TLLLCNMYQRPDMITPGVDAQGNPINP 306 PD + V G P+ P Sbjct: 276 P---------PDCVLSSV---GLPLRP 290
>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 476 Score = 28.9 bits (63), Expect = 6.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 142 NCPFYFKIGACRHGDRCSRLH 204 +C +Y + GAC GDRC H Sbjct: 64 DCVYYLRTGACGFGDRCRYNH 84
>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like| Length = 417 Score = 28.9 bits (63), Expect = 6.2 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 112 SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN 207 +IF D+ C FY K G C+ G C R H+ Sbjct: 273 NIFPERPDQPECQFYMKTGDCKFGAVC-RFHH 303
>CWC2_USTMA (Q4PA86) Pre-mRNA-splicing factor CWC2| Length = 480 Score = 28.5 bits (62), Expect = 8.1 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 133 DRVNCPFYFKIGACRHGDRCSRLHNKP 213 + V C +F G C HG C+ LH P Sbjct: 124 EAVYCCIHFARGCCPHGAECNFLHRLP 150
>MKRN2_MOUSE (Q9ERV1) Makorin-2| Length = 416 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G CR G +C H+ + P+ +C YQ+ Sbjct: 10 YFMHGVCREGSQCLFSHDLANSKPS-TICKYYQK 42
>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)| Length = 416 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +1 Query: 154 YFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQR 255 YF G CR G +C H+ + P+ +C YQ+ Sbjct: 10 YFMHGVCREGSQCLFSHDLANSKPS-TICKYYQK 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,678,695 Number of Sequences: 219361 Number of extensions: 715508 Number of successful extensions: 2361 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2247 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2356 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
