Clone Name	bast60h02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, comple...	662	0.0
2	gb|AY104582.1| Zea mays PCO116110 mRNA sequence	406	e-110
3	gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome...	375	e-101
4	emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary f...	375	e-101
5	dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clon...	375	e-101
6	dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clon...	375	e-101
7	gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete seq...	84	5e-13
8	gb|U67066.1|DMU67066 Drosophila melanogaster U2 snRNP auxiliary ...	78	3e-11
9	ref|NM_057860.3| Drosophila melanogaster U2 small nuclear ribopr...	78	3e-11
10	gb|AY058537.1| Drosophila melanogaster LD24048 full length cDNA	78	3e-11
11	gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21...	78	3e-11
12	gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 ...	78	3e-11
13	gb|AC004115.1|AC004115 Drosophila melanogaster (P1 DS02374 (D136...	78	3e-11
14	gb|AY104048.1| Zea mays PCO150712 mRNA sequence	72	2e-09
15	ref|XM_848596.1| PREDICTED: Canis familiaris similar to U2 small...	68	3e-08
16	ref|XM_862689.1| PREDICTED: Canis familiaris similar to U2 small...	68	3e-08
17	gb|BC102151.1| Bos taurus similar to U2 small nuclear RNA auxili...	68	3e-08
18	ref|NM_001034778.1| Bos taurus similar to U2 small nuclear RNA a...	68	3e-08
19	ref|XM_959321.1| Neurospora crassa OR74A hypothetical protein (N...	66	1e-07
20	ref|XM_330696.1| Neurospora crassa OR74A hypothetical protein (N...	66	1e-07
21	ref|XM_512599.1| PREDICTED: Pan troglodytes similar to U2(RNU2) ...	60	7e-06
22	ref|NM_144987.2| Homo sapiens U2 small nuclear RNA auxiliary fac...	60	7e-06
23	ref|NM_001040425.1| Homo sapiens U2 small nuclear RNA auxiliary ...	60	7e-06
24	gb|BC062474.1| Homo sapiens cDNA clone IMAGE:30396614, partial cds	60	7e-06
25	gb|BC021186.1| Homo sapiens U2 small nuclear RNA auxiliary facto...	60	7e-06
26	gb|BC049208.1| Homo sapiens U2 small nuclear RNA auxiliary facto...	60	7e-06
27	gb|AY569437.3| Homo sapiens U2 small nuclear RNA auxiliary facto...	60	7e-06
28	dbj|AK094213.1| Homo sapiens cDNA FLJ36894 fis, clone BRACE20007...	60	7e-06
29	ref|XM_862681.1| PREDICTED: Canis familiaris similar to U2 small...	56	1e-04
30	gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109...	56	1e-04
31	ref|XM_365103.1| Magnaporthe grisea 70-15 hypothetical protein (...	54	4e-04
32	ref|XM_533690.2| PREDICTED: Canis familiaris similar to U2 small...	54	4e-04
33	gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary facto...	52	0.002
34	gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA ...	52	0.002
35	gb|BC010865.1| Homo sapiens U2 small nuclear RNA auxiliary facto...	52	0.002
36	gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with appar...	52	0.002
37	gb|AF419339.1| Mus musculus U2 auxiliary factor 26 (U2af26) mRNA...	52	0.002
38	gb|AY325238.1| Rattus norvegicus Cb2-807 mRNA, complete cds	52	0.002
39	dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN ful...	52	0.002
40	ref|NM_001008775.1| Rattus norvegicus U2 small nuclear RNA auxil...	52	0.002
41	ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary fac...	52	0.002
42	ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid...	50	0.006
43	gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary ...	50	0.006
44	gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary ...	50	0.006
45	gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary ...	50	0.006
46	gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp...	50	0.006
47	gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp...	50	0.006
48	gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small su...	50	0.006
49	emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Co...	50	0.006
50	emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Co...	50	0.006
51	emb|BX841806.1|CNS09Y5O Arabidopsis thaliana Full-length cDNA Co...	50	0.006
52	gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana...	50	0.006
53	gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete se...	50	0.006
54	gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 ...	50	0.006
55	gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosom...	48	0.025
56	gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome...	48	0.025
57	gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary facto...	48	0.025
58	gb|AF419340.1| Mus musculus U2 auxiliary factor 26 (U2af26) gene...	48	0.025
59	gb|BC003883.1| Mus musculus cDNA sequence BC003883, mRNA (cDNA c...	48	0.025
60	gb|AY325237.1| Rattus norvegicus Cb2-806 mRNA, complete cds	48	0.025
61	emb|BX063586.1|CNS09L86 Single read from an extremity of a full-...	48	0.025
62	emb|BX063207.1|CNS09KXN Single read from an extremity of a full-...	48	0.025
63	emb|BX047151.1|CNS098JN Single read from an extremity of a full-...	48	0.025
64	emb|BX020851.1|CNS08O93 Single read from an extremity of a full-...	48	0.025
65	emb|BX020189.1|CNS08NQP Single read from an extremity of a full-...	48	0.025
66	emb|BX018585.1|CNS08MI5 Single read from an extremity of a full-...	48	0.025
67	ref|NM_001039663.1| Mus musculus cDNA sequence BC003883 (BC00388...	48	0.025
68	ref|XM_311943.2| Anopheles gambiae str. PEST ENSANGP00000011066 ...	48	0.025
69	gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complet...	48	0.025
70	ref|XM_463950.1| Oryza sativa (japonica cultivar-group), mRNA	46	0.098
71	ref|NM_191929.1| Oryza sativa (japonica cultivar-group), predic...	46	0.098
72	gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome...	46	0.098
73	emb|BX015533.1|CNS08K5D Single read from an extremity of a full-...	46	0.098
74	emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary f...	46	0.098
75	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
76	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
77	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
78	dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
79	dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
80	dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
81	dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.098
82	dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.098
83	gb|DQ217298.1| Taeniopygia guttata clone 0058P0033A02 RIKEN cDNA...	44	0.39
84	gb|DQ214380.1| Taeniopygia guttata clone 0058P0057E11 U2 snRNP a...	44	0.39
85	gb|DQ214379.1| Taeniopygia guttata clone 0061P0015E02 U2 snRNP a...	44	0.39
86	gb|DQ214378.1| Taeniopygia guttata clone 0058P0001H12 U2 snRNP a...	44	0.39
87	gb|DQ214377.1| Taeniopygia guttata clone 0058P0061E04 U2 snRNP a...	44	0.39
88	gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell...	44	0.39
89	gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswel...	44	0.39
90	dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113	44	0.39
91	emb|CR942436.2| Xenopus tropicalis finished cDNA, clone TEgg079l20	44	0.39
92	gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62...	44	0.39
93	emb|CT033130.1| Platynereis dumerilii EST IB0AAA26BB03EM1	44	0.39
94	gb|BC108558.1| Xenopus laevis cDNA clone MGC:131026 IMAGE:798019...	42	1.5
95	ref|NM_123647.2| Arabidopsis thaliana RNA binding / nucleic acid...	42	1.5
96	ref|NM_203141.1| Arabidopsis thaliana RNA binding / nucleic acid...	42	1.5
97	gb|BC053506.1| Homo sapiens protein phosphatase 1, regulatory (i...	42	1.5
98	gb|BC007854.2| Homo sapiens protein phosphatase 1, regulatory (i...	42	1.5
99	gb|BC049841.1| Homo sapiens protein phosphatase 1, regulatory (i...	42	1.5
100	gb|BC019796.1| Mus musculus retinol dehydrogenase 10 (all-trans)...	42	1.5
101	ref|XM_677539.1| Aspergillus nidulans FGSC A4 hypothetical prote...	42	1.5
102	ref|XM_675421.1| Aspergillus nidulans FGSC A4 hypothetical prote...	42	1.5
103	gb|BC038334.1| Mus musculus retinol dehydrogenase 10 (all-trans)...	42	1.5
104	gb|BT000219.1| Arabidopsis thaliana U2 snRNP auxiliary factor sm...	42	1.5
105	emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ...	42	1.5
106	emb|BX640434.1| Bordetella parapertussis strain 12822, complete ...	42	1.5
107	gb|AY136436.1| Arabidopsis thaliana U2 snRNP auxiliary factor sm...	42	1.5
108	dbj|AK126743.1| Homo sapiens cDNA FLJ44789 fis, clone BRACE3038760	42	1.5
109	dbj|AK094577.1| Homo sapiens cDNA FLJ37258 fis, clone BRAMY2010208	42	1.5
110	emb|CR590987.1| full-length cDNA clone CS0DJ003YB15 of T cells (...	42	1.5
111	gb|AF409140.1| Arabidopsis thaliana U2 auxiliary factor small su...	42	1.5
112	gb|BC052546.1| Mus musculus retinol dehydrogenase 10 (all-trans)...	42	1.5
113	emb|BX831764.1|CNS0A0YD Arabidopsis thaliana Full-length cDNA Co...	42	1.5
114	gb|AC084125.9| Homo sapiens chromosome 8, clone CTD-2517M22, com...	42	1.5
115	dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	1.5
116	ref|NM_032902.5| Homo sapiens protein phosphatase 1, regulatory ...	42	1.5
117	ref|NM_133832.2| Mus musculus retinol dehydrogenase 10 (all-tran...	42	1.5
118	gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, co...	42	1.5
119	gb|AF456767.1| Mus musculus retinol dehydrogenase 10 mRNA, compl...	42	1.5
120	dbj|AK090471.1| Homo sapiens mRNA for FLJ00392 protein	42	1.5
121	ref|NM_202656.1| Arabidopsis thaliana nucleic acid binding AT3G4...	40	6.1
122	gb|AC002534.1| Arabidopsis thaliana BAC T32N15 from chromosome I...	40	6.1
123	gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr...	40	6.1
124	gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete s...	40	6.1
125	gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...	40	6.1
126	gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, com...	40	6.1
127	ref|XM_322750.1| Neurospora crassa OR74A hypothetical protein (N...	40	6.1
128	ref|XM_950787.1| Neurospora crassa OR74A hypothetical protein (N...	40	6.1
129	gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge...	40	6.1
130	gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence	40	6.1
131	ref|XM_566499.1| Cryptococcus neoformans var. neoformans JEC21 t...	40	6.1
132	ref|XM_786467.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	6.1
133	gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome	40	6.1
134	gb|AY310157.1| Rattus norvegicus Ac1573 mRNA, complete cds	40	6.1
135	ref|XM_964331.1| PREDICTED: Tribolium castaneum similar to Splic...	40	6.1
136	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	40	6.1
137	emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ...	40	6.1
138	emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II B...	40	6.1
139	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	40	6.1
140	dbj|AK143290.1| Mus musculus 2 days pregnant adult female oviduc...	40	6.1
141	dbj|AK085772.1| Mus musculus 16 days neonate heart cDNA, RIKEN f...	40	6.1
142	ref|NM_001033415.1| Mus musculus RIKEN cDNA D830007B15 gene (D83...	40	6.1
143	ref|XM_573591.1| PREDICTED: Rattus norvegicus similar to MGC6883...	40	6.1
144	ref|XM_343499.2| PREDICTED: Rattus norvegicus similar to Oligosa...	40	6.1
145	emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chr...	40	6.1
146	emb|CT032570.1| Platynereis dumerilii EST IB0AAA36BC01EM1	40	6.1
147	gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome...	40	6.1
148	gb|L77234.1|NEUHETC Neurospora crassa glycine-rich protein (het-...	40	6.1
149	gb|L37354.1|SERORF1 Saccharopolyspora erythraea ORF1 and ORF4, p...	40	6.1

---

>gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds
          Length = 1199

 Score =  662 bits (334), Expect = 0.0
 Identities = 354/361 (98%)
 Strand = Plus / Plus

                                                                       
Query: 91  gccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccg 150
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1   gccatggccgagcacctcgcgtcgatcttcggcacggagaaggaccgcgtgaactgcccg 60

                                                                       
Query: 151 ttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaag 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaag 120

                                                                       
Query: 211 ccgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcacc 270
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgtctgtctcgcccacgctgctgctctgcaacatgtaccagcgccccgacatgatcacc 180

                                                                       
Query: 271 ccgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgag 330
           ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 ccgggcgtggacgcgcagggcaaccccatcgaccccgtcaagatccagggcgacttcgag 240

                                                                       
Query: 331 gacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcac 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcac 300

                                                                       
Query: 391 gtctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggag 450
           |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 301 gtctgcgacaacctcgccgaccacctcattggcaacgtctacgtgcagttcagggaggag 360

            
Query: 451 g 451
           |
Sbjct: 361 g 361

---

>gb|AY104582.1| Zea mays PCO116110 mRNA sequence
          Length = 1178

 Score =  406 bits (205), Expect = e-110
 Identities = 321/360 (89%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgt 151
           ||||||| ||||| || ||||| ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 429 ccatggctgagcatcttgcgtccatctttggcacggagaaggaccgcgtgaactgcccct 488

                                                                       
Query: 152 tctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagc 211
           ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 489 tctacttcaagatcggcgcatgccgccacggcgaccggtgctcccgcctgcacaacaagc 548

                                                                       
Query: 212 cgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccc 271
           | ||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 549 cttccatctccccgacgctgctgctctgcaacatgtaccagcggccggacatgatcaccc 608

                                                                       
Query: 272 cgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgagg 331
           |||| |||||||||||||||||||||||| |||| |    ||||||||  ||||||||||
Sbjct: 609 cgggcgtggacgcgcagggcaaccccatcgacccggagcggatccaggaggacttcgagg 668

                                                                       
Query: 332 acttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacg 391
           |||||||||||||||||||||  ||||| ||||||||||||||| |||||| ||| ||||
Sbjct: 669 acttctacgaggacatcttcgtggagctgagcaagcacggcgagatcgagagcctccacg 728

                                                                       
Query: 392 tctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggagg 451
           |||||||||||||||| |||||| |||| || | ||| |||||| ||||| | |||||||
Sbjct: 729 tctgcgacaacctcgcggaccacatgatcgggaacgtgtacgtggagttccgcgaggagg 788

---

>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score =  375 bits (189), Expect = e-101
 Identities = 317/360 (88%)
 Strand = Plus / Minus

                                                                         
Query: 92    ccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgt 151
             ||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 54364 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 54305

                                                                         
Query: 152   tctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagc 211
             ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 54304 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 54245

                                                                         
Query: 212   cgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccc 271
             |||| |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||
Sbjct: 54244 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 54185

                                                                         
Query: 272   cgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgagg 331
             | ||  | || || ||||||||||||||| |||| |  |||||||||| |||||||||||
Sbjct: 54184 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 54125

                                                                         
Query: 332   acttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacg 391
             | ||||||||||||||||| || || ||||||||| |||||||| |||||| ||| ||||
Sbjct: 54124 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 54065

                                                                         
Query: 392   tctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggagg 451
             | || |||||| ||||||||||| |||| ||||  || || || || |||||||||||||
Sbjct: 54064 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 54005



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 1     ctcctccttctgcttcccctccggctacggcggcgctgatctccg 45
             |||||||| |||||||||||||||| |||||||||| ||||||||
Sbjct: 54943 ctcctcctcctgcttcccctccggcgacggcggcgcagatctccg 54899

---

>emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a
          Length = 1277

 Score =  375 bits (189), Expect = e-101
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgt 151
           ||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 210 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 269

                                                                       
Query: 152 tctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagc 211
           ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 270 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 329

                                                                       
Query: 212 cgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccc 271
           |||| |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||
Sbjct: 330 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 389

                                                                       
Query: 272 cgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgagg 331
           | ||  | || || ||||||||||||||| |||| |  |||||||||| |||||||||||
Sbjct: 390 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 449

                                                                       
Query: 332 acttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacg 391
           | ||||||||||||||||| || || ||||||||| |||||||| |||||| ||| ||||
Sbjct: 450 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 509

                                                                       
Query: 392 tctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggagg 451
           | || |||||| ||||||||||| |||| ||||  || || || || |||||||||||||
Sbjct: 510 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 569

---

>dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full
           insert sequence
          Length = 1499

 Score =  375 bits (189), Expect = e-101
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgt 151
           ||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 431 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 490

                                                                       
Query: 152 tctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagc 211
           ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 491 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 550

                                                                       
Query: 212 cgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccc 271
           |||| |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||
Sbjct: 551 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 610

                                                                       
Query: 272 cgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgagg 331
           | ||  | || || ||||||||||||||| |||| |  |||||||||| |||||||||||
Sbjct: 611 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 670

                                                                       
Query: 332 acttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacg 391
           | ||||||||||||||||| || || ||||||||| |||||||| |||||| ||| ||||
Sbjct: 671 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 730

                                                                       
Query: 392 tctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggagg 451
           | || |||||| ||||||||||| |||| ||||  || || || || |||||||||||||
Sbjct: 731 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 790



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 10 ctgcttcccctccggctacggcggcgctgatctccg 45
          |||||||||||||||| |||||||||| ||||||||
Sbjct: 37 ctgcttcccctccggcgacggcggcgcagatctccg 72

---

>dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full
           insert sequence
          Length = 1257

 Score =  375 bits (189), Expect = e-101
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccatggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgt 151
           ||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 221 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 280

                                                                       
Query: 152 tctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagc 211
           ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 281 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 340

                                                                       
Query: 212 cgtccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccc 271
           |||| |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||
Sbjct: 341 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 400

                                                                       
Query: 272 cgggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgagg 331
           | ||  | || || ||||||||||||||| |||| |  |||||||||| |||||||||||
Sbjct: 401 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 460

                                                                       
Query: 332 acttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacg 391
           | ||||||||||||||||| || || ||||||||| |||||||| |||||| ||| ||||
Sbjct: 461 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 520

                                                                       
Query: 392 tctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggaggagg 451
           | || |||||| ||||||||||| |||| ||||  || || || || |||||||||||||
Sbjct: 521 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 580

---

>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence
          Length = 116998

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                         
Query: 115   atcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcgtgc 174
             ||||||||||| || || ||| | || |||||||| ||||||||||||||||||||||| 
Sbjct: 20010 atcttcggcacagaaaaagacagagtaaactgccctttctacttcaagatcggcgcgtgt 19951

                                                                         
Query: 175   cggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgccgacgctgctg 234
             || ||||||||||| ||||| || || ||||||   ||  |  |||| || || || || 
Sbjct: 19950 cgtcacggcgaccgttgctctcgtctccacaaccgacccacaatctccccaactcttctc 19891

                                                   
Query: 235   ctctgcaacatgtaccagcgccccgacatgatcacccc 272
             |||| |||||||||||| || |||||||| ||||||||
Sbjct: 19890 ctctccaacatgtaccaacgtcccgacatcatcacccc 19853

---

>gb|U67066.1|DMU67066 Drosophila melanogaster U2 snRNP auxiliary factor (dU2AF38) mRNA,
           complete cds
          Length = 1380

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 299 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 358

                      
Query: 199 ctgcacaacaa 209
            | ||||||||
Sbjct: 359 atccacaacaa 369

---

>ref|NM_057860.3| Drosophila melanogaster U2 small nuclear riboprotein auxiliary
           factor 38 CG3582-RA (U2af38), mRNA
          Length = 1275

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 241 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 300

                      
Query: 199 ctgcacaacaa 209
            | ||||||||
Sbjct: 301 atccacaacaa 311

---

>gb|AY058537.1| Drosophila melanogaster LD24048 full length cDNA
          Length = 1254

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 217 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 276

                      
Query: 199 ctgcacaacaa 209
            | ||||||||
Sbjct: 277 atccacaacaa 287

---

>gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone
              BACR22C14, complete sequence
          Length = 163461

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 139    gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
              ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 118393 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 118334

                         
Query: 199    ctgcacaacaa 209
               | ||||||||
Sbjct: 118333 atccacaacaa 118323

---

>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete
              sequence
          Length = 305900

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 139    gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
              ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 294371 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 294312

                         
Query: 199    ctgcacaacaa 209
               | ||||||||
Sbjct: 294311 atccacaacaa 294301

---

>gb|AC004115.1|AC004115 Drosophila melanogaster (P1 DS02374 (D136)) DNA sequence, complete
             sequence
          Length = 80101

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 139   gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
             ||||||||  |||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 15396 gtgaactgttcgttctacttcaagatcggcgcctgccgccacggcgaccggtgctctcgc 15337

                        
Query: 199   ctgcacaacaa 209
              | ||||||||
Sbjct: 15336 atccacaacaa 15326

---

>gb|AY104048.1| Zea mays PCO150712 mRNA sequence
          Length = 930

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 93  catggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgtt 152
           |||||| |||||| | || |||||||||||||| ||||||||| | || |||||||| ||
Sbjct: 137 catggcggagcacttggcttcgatcttcggcactgagaaggacagggtcaactgcccttt 196

                                                                   
Query: 153 ctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaaca 208
            ||||||||||| || || || || || || || |||||||| || ||||||||||
Sbjct: 197 ttacttcaagattggggcctgtcgtcatggggatcgctgctctcgtctgcacaaca 252

---

>ref|XM_848596.1| PREDICTED: Canis familiaris similar to U2 small nuclear RNA
           auxiliary factor 1-like 4, transcript variant 2
           (LOC476480), mRNA
          Length = 858

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| || 
Sbjct: 19  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggcc 78

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 79  tgccggcacggggaccggtgctcccggcttcacaacaagccg 120

---

>ref|XM_862689.1| PREDICTED: Canis familiaris similar to U2 small nuclear RNA
           auxiliary factor 1-like 4, transcript variant 4
           (LOC476480), mRNA
          Length = 748

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| || 
Sbjct: 26  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggcc 85

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 86  tgccggcacggggaccggtgctcccggcttcacaacaagccg 127

---

>gb|BC102151.1| Bos taurus similar to U2 small nuclear RNA auxiliary factor 1-like
           4, mRNA (cDNA clone MGC:127195 IMAGE:7945930), complete
           cds
          Length = 1138

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| || 
Sbjct: 149 tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggcc 208

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 209 tgccggcacggggaccggtgctcccggcttcacaacaagccg 250

---

>ref|NM_001034778.1| Bos taurus similar to U2 small nuclear RNA auxiliary factor 1-like
           4 (MGC127195), mRNA
          Length = 1138

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| || 
Sbjct: 149 tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggcc 208

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 209 tgccggcacggggaccggtgctcccggcttcacaacaagccg 250

---

>ref|XM_959321.1| Neurospora crassa OR74A hypothetical protein (NCU03261.1) partial
           mRNA
          Length = 627

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           |||||| ||||||| | |||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 49  aactgctcgttctattacaagatcggcgcctgccgccacggcgaccggtgctcccgc 105

---

>ref|XM_330696.1| Neurospora crassa OR74A hypothetical protein (NCU03261.1) partial
           mRNA
          Length = 627

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           |||||| ||||||| | |||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 49  aactgctcgttctattacaagatcggcgcctgccgccacggcgaccggtgctcccgc 105

---

>ref|XM_512599.1| PREDICTED: Pan troglodytes similar to U2(RNU2) small nuclear RNA
           auxiliary factor 1-like 3; U2 small nuclear
           ribonucleoprotein auxiliary factor, small subunit 3
           (LOC455961), mRNA
          Length = 1182

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 19  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 78

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 79  tgccggcacggggaccggtgctcccggcttcacaacaagccg 120

---

>ref|NM_144987.2| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4
           (U2AF1L4), transcript variant 2, mRNA
          Length = 734

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 63  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 122

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 123 tgccggcacggggaccggtgctcccggcttcacaacaagccg 164

---

>ref|NM_001040425.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4
           (U2AF1L4), transcript variant 1, mRNA
          Length = 792

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 63  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 122

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 123 tgccggcacggggaccggtgctcccggcttcacaacaagccg 164

---

>gb|BC062474.1| Homo sapiens cDNA clone IMAGE:30396614, partial cds
          Length = 1268

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 25  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 84

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 85  tgccggcacggggaccggtgctcccggcttcacaacaagccg 126

---

>gb|BC021186.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone MGC:33901 IMAGE:5260387), complete cds
          Length = 711

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 39  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 98

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 99  tgccggcacggggaccggtgctcccggcttcacaacaagccg 140

---

>gb|BC049208.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone IMAGE:5243899), with apparent retained
           intron
          Length = 2060

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 30  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 89

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 90  tgccggcacggggaccggtgctcccggcttcacaacaagccg 131

---

>gb|AY569437.3| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 3
           splicing variant 1 mRNA, complete cds, alternatively
           spliced
          Length = 767

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 39  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 98

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 99  tgccggcacggggaccggtgctcccggcttcacaacaagccg 140

---

>dbj|AK094213.1| Homo sapiens cDNA FLJ36894 fis, clone BRACE2000753, weakly similar
           to U2 small nuclear RNA auxillary factor 1
          Length = 2580

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| |||||||| |  
Sbjct: 42  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagatcggggtc 101

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 102 tgccggcacggggaccggtgctcccggcttcacaacaagccg 143

---

>ref|XM_862681.1| PREDICTED: Canis familiaris similar to U2 small nuclear RNA
           auxiliary factor 1-like 4, transcript variant 3
           (LOC476480), mRNA
          Length = 826

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 162 gatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           |||||| || ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 37  gatcggggcctgccggcacggggaccggtgctcccggcttcacaacaagccg 88

---

>gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109 containing HRX2,
             genomic sequence
          Length = 46251

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 154   tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
             ||||| |||||||| |  ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 40706 tactttaagatcggggtctgccggcacggggaccggtgctcccggcttcacaacaagccg 40647

---

>ref|XM_365103.1| Magnaporthe grisea 70-15 hypothetical protein (MG09948.4) partial
           mRNA
          Length = 630

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 154 tacttcaagatcggcgcgtgccggcacggcgaccgctgc 192
           ||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 61  tacttcaagattggcgcatgccgccacggcgaccgctgc 99

---

>ref|XM_533690.2| PREDICTED: Canis familiaris similar to U2 small nuclear RNA
           auxiliary factor 1-like 4, transcript variant 1
           (LOC476480), mRNA
          Length = 833

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 163 atcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||| || ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 45  atcggggcctgccggcacggggaccggtgctcccggcttcacaacaagccg 95

---

>gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone MGC:74063 IMAGE:6593404), complete cds
          Length = 892

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 35  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 94

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 95  tgccggcacggggaccggtgctcccgacttcacaacaa 132

---

>gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA (cDNA clone
           IMAGE:6811485), partial cds
          Length = 2910

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 25  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 84

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 85  tgccggcacggggaccggtgctcccgacttcacaacaa 122

---

>gb|BC010865.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone IMAGE:3900153), with apparent retained
           intron
          Length = 990

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccg 213
           ||||||||||| ||||| |||||||| || ||||||||||||
Sbjct: 89  tgccggcacggggaccggtgctcccggcttcacaacaagccg 130

---

>gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with apparent retained
           intron
          Length = 2735

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 20  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 79

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 80  tgccggcacggggaccggtgctcccgacttcacaacaa 117

---

>gb|AF419339.1| Mus musculus U2 auxiliary factor 26 (U2af26) mRNA, complete cds
          Length = 663

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 19  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 78

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 79  tgccggcacggggaccggtgctcccgacttcacaacaa 116

---

>gb|AY325238.1| Rattus norvegicus Cb2-807 mRNA, complete cds
          Length = 709

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 59  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggggcc 118

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 119 tgccggcacggggaccggtgctcccgacttcacaacaa 156

---

>dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4022425H17 product:U2 small nuclear RNA
           auxiliary factor 1-like 4, full insert sequence
          Length = 3009

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 32  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 91

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 92  tgccggcacggggaccggtgctcccgacttcacaacaa 129

---

>ref|NM_001008775.1| Rattus norvegicus U2 small nuclear RNA auxiliary factor 1-like 4
           (U2af1l4), mRNA
          Length = 709

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 59  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggggcc 118

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 119 tgccggcacggggaccggtgctcccgacttcacaacaa 156

---

>ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4
           (U2af1l4), mRNA
          Length = 892

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| || |||||||||   || |||||| | || ||||| ||||| || || 
Sbjct: 35  tcgatattcgggactgagaaggacaaggttaactgctctttttactttaagattggagcc 94

                                                 
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 95  tgccggcacggggaccggtgctcccgacttcacaacaa 132

---

>ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G27650
           mRNA, complete cds
          Length = 1381

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 221 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 280

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 281 cttcacaac 289

---

>gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 891

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 46  gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 105

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 106 cttcacaac 114

---

>gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor protein
           (At1g27650) mRNA, complete cds
          Length = 922

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 46  gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 105

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 106 cttcacaac 114

---

>gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 1306

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 193 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 252

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 253 cttcacaac 261

---

>gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 891

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 46  gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 105

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 106 cttcacaac 114

---

>gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 1233

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 212 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 271

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 272 cttcacaac 280

---

>gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small subunit (AUSA) mRNA,
           complete cds
          Length = 980

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 86  gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 145

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 146 cttcacaac 154

---

>emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH31ZA11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 215 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 274

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 275 cttcacaac 283

---

>emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS49ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1279

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 196 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 255

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 256 cttcacaac 264

---

>emb|BX841806.1|CNS09Y5O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB88ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 228 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 287

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 288 cttcacaac 296

---

>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I,
             complete sequence
          Length = 106753

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 139   gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
             ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 27180 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 27239

                      
Query: 199   ctgcacaac 207
             || ||||||
Sbjct: 27240 cttcacaac 27248

---

>gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete sequence
          Length = 1362

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 139 gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
           ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 221 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 280

                    
Query: 199 ctgcacaac 207
           || ||||||
Sbjct: 281 cttcacaac 289

---

>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence
          Length = 65839

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 139   gtgaactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgc 198
             ||||| ||||| |||||||||||||| ||||| ||||| || || ||||| ||||| || 
Sbjct: 59593 gtgaattgccctttctacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgt 59652

                      
Query: 199   ctgcacaac 207
             || ||||||
Sbjct: 59653 cttcacaac 59661

---

>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence
          Length = 238950

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 154   tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
             ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 56743 tactttaagattggagcctgccggcacggggaccggtgctcccgacttcacaacaa 56688

---

>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence
          Length = 214959

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 154    tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
              ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 191451 tactttaagattggagcctgccggcacggggaccggtgctcccgacttcacaacaa 191396

---

>gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone IMAGE:1513450), with apparent retained
           intron
          Length = 701

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 154 tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 85  tactttaagattggagcctgccggcacggggaccggtgctcccgacttcacaacaa 140

---

>gb|AF419340.1| Mus musculus U2 auxiliary factor 26 (U2af26) gene, complete cds
          Length = 1824

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 154 tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 193 tactttaagattggagcctgccggcacggggaccggtgctcccgacttcacaacaa 248

---

>gb|BC003883.1| Mus musculus cDNA sequence BC003883, mRNA (cDNA clone MGC:6653
           IMAGE:3496988), complete cds
          Length = 1411

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcgg 167
           ||||| ||||| || ||||| ||| | |||||||| || |||||||||||||||||
Sbjct: 92  tcgatattcgggacagagaaagacagagtgaactgtccattctacttcaagatcgg 147

---

>gb|AY325237.1| Rattus norvegicus Cb2-806 mRNA, complete cds
          Length = 765

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 154 tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 99  tactttaagattggggcctgccggcacggggaccggtgctcccgacttcacaacaa 154

---

>emb|BX063586.1|CNS09L86 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45CA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 846

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 31  tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 90

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 91  tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 142

---

>emb|BX063207.1|CNS09KXN Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC44DF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 828

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 1   tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 60

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 61  tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 112

---

>emb|BX047151.1|CNS098JN Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC21AG11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 687

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 136 tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 195

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 196 tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 247

---

>emb|BX020851.1|CNS08O93 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA30DA05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 695

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 140 tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 199

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 200 tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 251

---

>emb|BX020189.1|CNS08NQP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA3CH11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 931

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 129 tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 188

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 189 tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 240

---

>emb|BX018585.1|CNS08MI5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA28BA04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 473

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 114 tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 173

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 174 tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 225

---

>ref|NM_001039663.1| Mus musculus cDNA sequence BC003883 (BC003883), mRNA
          Length = 1411

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcgg 167
           ||||| ||||| || ||||| ||| | |||||||| || |||||||||||||||||
Sbjct: 92  tcgatattcgggacagagaaagacagagtgaactgtccattctacttcaagatcgg 147

---

>ref|XM_311943.2| Anopheles gambiae str. PEST ENSANGP00000011066
           (ENSANGG00000008577), partial mRNA
          Length = 728

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 112 tcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcg 171
           ||||| ||||| |||||||| |||   || |||||  |||||||||| || || || || 
Sbjct: 141 tcgattttcggtaccgagaaagacaaggtcaactgttcgttctactttaaaattggtgcc 200

                                                               
Query: 172 tgccggcacggcgaccgctgctcccgcctgcacaacaagccgtccgtctcgc 223
           ||||| || || || |||||||||||| | |||||||||||| || ||||||
Sbjct: 201 tgccgccatggagatcgctgctcccgcatccacaacaagccgaccttctcgc 252

---

>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence
          Length = 196912

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 154   tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
             ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||||||
Sbjct: 88222 tactttaagattggagcctgccggcacggggaccggtgctcccgacttcacaacaa 88277

---

>ref|XM_463950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 225

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 85  ggcgccgccatggccgagcacctcgcg 111
           ||||||||||||||||| |||||||||
Sbjct: 141 ggcgccgccatggccgaccacctcgcg 115

---

>ref|NM_191929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 328 gaggacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctg 387
           ||||| ||||| ||||||||||| || || || ||||||   || ||| | |||||||| 
Sbjct: 235 gaggatttctatgaggacatctttgaggaactaagcaagtttggtgagattgagaacctc 294

                                                                       
Query: 388 cacgtctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggag 447
            |||||||||| ||||| || || ||| |||| ||||  || || || ||||||||||||
Sbjct: 295 aacgtctgcgataaccttgcggatcacatgataggcaatgtttatgtccagttcagggag 354

             
Query: 448 ga 449
           ||
Sbjct: 355 ga 356

---

>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 142   aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
             |||||||| || ||||||||||| || || ||||| || || || || |||||||| |||
Sbjct: 91833 aactgccccttttacttcaagattggggcttgccgtcatggggatcgttgctcccgtctg 91892

                    
Query: 202   cacaaca 208
             |||||||
Sbjct: 91893 cacaaca 91899

---

>emb|BX015533.1|CNS08K5D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA23BD01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 224

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 149 cgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaaca 208
           |||||||||| || || || || ||||| || || || |||||||||||| | |||||||
Sbjct: 78  cgttctactttaaaattggtgcctgccgccatggagatcgctgctcccgcatccacaaca 137

                          
Query: 209 agccgtccgtctcgc 223
           ||||| || ||||||
Sbjct: 138 agccgaccttctcgc 152

---

>emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35b
          Length = 1289

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
           |||||||| || ||||||||||| || || ||||| || || || || |||||||| |||
Sbjct: 184 aactgccccttttacttcaagattggggcttgccgtcatggggatcgttgctcccgtctg 243

                  
Query: 202 cacaaca 208
           |||||||
Sbjct: 244 cacaaca 250

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 142      aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
                |||||||| || ||||||||||| || || ||||| || || || || |||||||| |||
Sbjct: 27861416 aactgccccttttacttcaagattggggcttgccgtcatggggatcgttgctcccgtctg 27861475

                       
Query: 202      cacaaca 208
                |||||||
Sbjct: 27861476 cacaaca 27861482

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 85      ggcgccgccatggccgagcacctcgcg 111
               ||||||||||||||||| |||||||||
Sbjct: 1302083 ggcgccgccatggccgaccacctcgcg 1302109

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 97/122 (79%)
 Strand = Plus / Minus

                                                                            
Query: 328      gaggacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctg 387
                ||||| ||||| ||||||||||| || || || ||||||   || ||| | |||||||| 
Sbjct: 27311429 gaggatttctatgaggacatctttgaggaactaagcaagtttggtgagattgagaacctc 27311370

                                                                            
Query: 388      cacgtctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggag 447
                 |||||||||| ||||| || || ||| |||| ||||  || || || ||||||||||||
Sbjct: 27311369 aacgtctgcgataaccttgcggatcacatgataggcaatgtttatgtccagttcagggag 27311310

                  
Query: 448      ga 449
                ||
Sbjct: 27311309 ga 27311308

---

>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 97/122 (79%)
 Strand = Plus / Minus

                                                                         
Query: 328   gaggacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctg 387
             ||||| ||||| ||||||||||| || || || ||||||   || ||| | |||||||| 
Sbjct: 91946 gaggatttctatgaggacatctttgaggaactaagcaagtttggtgagattgagaacctc 91887

                                                                         
Query: 388   cacgtctgcgacaacctcgccgaccacctgattggcancgtctacgtgcagttcagggag 447
              |||||||||| ||||| || || ||| |||| ||||  || || || ||||||||||||
Sbjct: 91886 aacgtctgcgataaccttgcggatcacatgataggcaatgtttatgtccagttcagggag 91827

               
Query: 448   ga 449
             ||
Sbjct: 91826 ga 91825

---

>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0575F10
          Length = 150462

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 85     ggcgccgccatggccgagcacctcgcg 111
              ||||||||||||||||| |||||||||
Sbjct: 133174 ggcgccgccatggccgaccacctcgcg 133200

---

>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0018H03, complete sequence
          Length = 94450

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 85    ggcgccgccatggccgagcacctcgcg 111
             ||||||||||||||||| |||||||||
Sbjct: 76112 ggcgccgccatggccgaccacctcgcg 76138

---

>dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A01, full
           insert sequence
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
           |||||||| || ||||||||||| || || ||||| || || || || |||||||| |||
Sbjct: 180 aactgccccttttacttcaagattggggcttgccgtcatggggatcgttgctcccgtctg 239

                  
Query: 202 cacaaca 208
           |||||||
Sbjct: 240 cacaaca 246

---

>dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B11, full
           insert sequence
          Length = 1309

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
           |||||||| || ||||||||||| || || ||||| || || || || |||||||| |||
Sbjct: 191 aactgccccttttacttcaagattggggcttgccgtcatggggatcgttgctcccgtctg 250

                  
Query: 202 cacaaca 208
           |||||||
Sbjct: 251 cacaaca 257

---

>gb|DQ217298.1| Taeniopygia guttata clone 0058P0033A02 RIKEN cDNA 2510006D16
           variant 1-like mRNA, complete sequence
          Length = 889

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggac 135
           ||||| ||| |||| || || |||||||||||||||||||||
Sbjct: 44  atggcggagtacctggcctccatcttcggcaccgagaaggac 85

---

>gb|DQ214380.1| Taeniopygia guttata clone 0058P0057E11 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggac 135
           ||||| ||| |||| || || |||||||||||||||||||||
Sbjct: 22  atggcggagtacctggcctccatcttcggcaccgagaaggac 63

---

>gb|DQ214379.1| Taeniopygia guttata clone 0061P0015E02 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 864

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggac 135
           ||||| ||| |||| || || |||||||||||||||||||||
Sbjct: 19  atggcggagtacctggcctccatcttcggcaccgagaaggac 60

---

>gb|DQ214378.1| Taeniopygia guttata clone 0058P0001H12 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggac 135
           ||||| ||| |||| || || |||||||||||||||||||||
Sbjct: 22  atggcggagtacctggcctccatcttcggcaccgagaaggac 63

---

>gb|DQ214377.1| Taeniopygia guttata clone 0058P0061E04 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggac 135
           ||||| ||| |||| || || |||||||||||||||||||||
Sbjct: 22  atggcggagtacctggcctccatcttcggcaccgagaaggac 63

---

>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 215    ccgtctcgccgacgctgctgctctgc 240
              ||||||||||||||||||||| ||||
Sbjct: 114169 ccgtctcgccgacgctgctgcgctgc 114144

---

>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173109

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 215   ccgtctcgccgacgctgctgctctgc 240
             ||||||||||||||||||||| ||||
Sbjct: 13743 ccgtctcgccgacgctgctgcgctgc 13718

---

>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 149   cgttctacttcaagatcggcgcgtgccggcacggcgac 186
             ||||||||| |||||||||||| ||| | |||||||||
Sbjct: 76996 cgttctactacaagatcggcgcatgcagacacggcgac 76959

---

>emb|CR942436.2| Xenopus tropicalis finished cDNA, clone TEgg079l20
          Length = 971

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                       
Query: 115 atcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcgtgc 174
           |||||||| ||||||||||||   || |||||| | || ||||| ||||| || || || 
Sbjct: 25  atcttcggtaccgagaaggacaaggttaactgctcattttactttaagattggagcatgt 84

                                                 
Query: 175 cggcacggcgaccgctgctcccgcctgcacaacaagcc 212
           || || || ||||| |||||||| || |||||||||||
Sbjct: 85  cgccatggagaccgatgctcccgacttcacaacaagcc 122

---

>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
             sequence
          Length = 290640

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 215   ccgtctcgccgacgctgctgctctgc 240
             ||||||||||||||||||||| ||||
Sbjct: 92637 ccgtctcgccgacgctgctgcgctgc 92612

---

>emb|CT033130.1| Platynereis dumerilii EST IB0AAA26BB03EM1
          Length = 867

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 ttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaag 210
           ||||||||||||||||| || || |||||||| ||  | || ||||| || |||||||||
Sbjct: 85  ttctacttcaagatcggagcatgtcggcacggagaaagatgttcccgtctccacaacaag 144

             
Query: 211 cc 212
           ||
Sbjct: 145 cc 146

---

>gb|BC108558.1| Xenopus laevis cDNA clone MGC:131026 IMAGE:7980196, complete cds
          Length = 1403

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                       
Query: 109 gcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgttctacttcaagatcggc 168
           ||||| |||||||||||||| ||||||   || |||||| | || ||||| ||||| || 
Sbjct: 81  gcgtccatcttcggcaccgaaaaggacaaggttaactgctcattttactttaagattgga 140

                                                    
Query: 169 gcgtgccggcacggcgaccgctgctcccgcctgcacaacaa 209
           || || || || || ||||| |||||||| || ||||||||
Sbjct: 141 gcatgtcgccatggagaccgatgctcccggcttcacaacaa 181

---

>ref|NM_123647.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G42820
           transcript variant AT5G42820.1 mRNA, complete cds
          Length = 1216

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 256 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 304

---

>ref|NM_203141.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G42820
           transcript variant AT5G42820.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 221 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 269

---

>gb|BC053506.1| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit
           16A, mRNA (cDNA clone MGC:59641 IMAGE:2823232), complete
           cds
          Length = 2326

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 463 cgccgccatggccgagcacct 483

---

>gb|BC007854.2| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit
           16A, mRNA (cDNA clone MGC:14333 IMAGE:4298333), complete
           cds
          Length = 1967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 122 cgccgccatggccgagcacct 142

---

>gb|BC049841.1| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit
           16A, mRNA (cDNA clone MGC:51793 IMAGE:4991947), complete
           cds
          Length = 2201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 374 cgccgccatggccgagcacct 394

---

>gb|BC019796.1| Mus musculus retinol dehydrogenase 10 (all-trans), mRNA (cDNA clone
           MGC:30527 IMAGE:4923005), complete cds
          Length = 2310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 gccgacgctgctgctctgcaa 242
           |||||||||||||||||||||
Sbjct: 404 gccgacgctgctgctctgcaa 424

---

>ref|XM_677539.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9362.2), mRNA
          Length = 630

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctc 194
           |||||| | ||||||| |||||||||||| ||| | || |||||||| |||||
Sbjct: 49  aactgctctttctactacaagatcggcgcctgcagacatggcgaccggtgctc 101

---

>ref|XM_675421.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7244.2), mRNA
          Length = 327

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 389 acgtctgcgacaacctcgccg 409
           |||||||||||||||||||||
Sbjct: 205 acgtctgcgacaacctcgccg 185

---

>gb|BC038334.1| Mus musculus retinol dehydrogenase 10 (all-trans), mRNA (cDNA clone
           IMAGE:1395365)
          Length = 1400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 gccgacgctgctgctctgcaa 242
           |||||||||||||||||||||
Sbjct: 898 gccgacgctgctgctctgcaa 878

---

>gb|BT000219.1| Arabidopsis thaliana U2 snRNP auxiliary factor small subunit
           (At5g42820) mRNA, complete cds
          Length = 1067

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 125 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 173

---

>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    gacgcgcagggcaaccccatc 300
              |||||||||||||||||||||
Sbjct: 239179 gacgcgcagggcaaccccatc 239159

---

>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    gacgcgcagggcaaccccatc 300
              |||||||||||||||||||||
Sbjct: 183373 gacgcgcagggcaaccccatc 183353

---

>gb|AY136436.1| Arabidopsis thaliana U2 snRNP auxiliary factor small subunit
           (At5g42820) mRNA, complete cds
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 256 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 304

---

>dbj|AK126743.1| Homo sapiens cDNA FLJ44789 fis, clone BRACE3038760
          Length = 3392

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 87   cgccgccatggccgagcacct 107
            |||||||||||||||||||||
Sbjct: 2560 cgccgccatggccgagcacct 2540

---

>dbj|AK094577.1| Homo sapiens cDNA FLJ37258 fis, clone BRAMY2010208
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 87   cgccgccatggccgagcacct 107
            |||||||||||||||||||||
Sbjct: 1055 cgccgccatggccgagcacct 1035

---

>emb|CR590987.1| full-length cDNA clone CS0DJ003YB15 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 2660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 909 cgccgccatggccgagcacct 929

---

>gb|AF409140.1| Arabidopsis thaliana U2 auxiliary factor small subunit (AUSB) mRNA,
           complete cds
          Length = 1128

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 187 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 235

---

>gb|BC052546.1| Mus musculus retinol dehydrogenase 10 (all-trans), mRNA (cDNA clone
           IMAGE:1429338)
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 gccgacgctgctgctctgcaa 242
           |||||||||||||||||||||
Sbjct: 902 gccgacgctgctgctctgcaa 882

---

>emb|BX831764.1|CNS0A0YD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZF03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1459

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 220 tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 268

---

>gb|AC084125.9| Homo sapiens chromosome 8, clone CTD-2517M22, complete sequence
          Length = 197294

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     cgccgccatggccgagcacct 107
              |||||||||||||||||||||
Sbjct: 131564 cgccgccatggccgagcacct 131544

---

>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 218 tctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgat 266
           ||||||||||||| || ||||  |||||||||||| | || ||||||||
Sbjct: 94  tctcgccgacgcttctcctctcgaacatgtaccagagacctgacatgat 46

---

>ref|NM_032902.5| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit
           16A (PPP1R16A), mRNA
          Length = 2326

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 463 cgccgccatggccgagcacct 483

---

>ref|NM_133832.2| Mus musculus retinol dehydrogenase 10 (all-trans) (Rdh10), mRNA
          Length = 2310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 gccgacgctgctgctctgcaa 242
           |||||||||||||||||||||
Sbjct: 404 gccgacgctgctgctctgcaa 424

---

>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence
          Length = 201383

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   gccgacgctgctgctctgcaa 242
             |||||||||||||||||||||
Sbjct: 84732 gccgacgctgctgctctgcaa 84752

---

>gb|AF456767.1| Mus musculus retinol dehydrogenase 10 mRNA, complete cds
          Length = 1364

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 gccgacgctgctgctctgcaa 242
           |||||||||||||||||||||
Sbjct: 512 gccgacgctgctgctctgcaa 532

---

>dbj|AK090471.1| Homo sapiens mRNA for FLJ00392 protein
          Length = 4224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgccgccatggccgagcacct 107
           |||||||||||||||||||||
Sbjct: 978 cgccgccatggccgagcacct 998

---

>ref|NM_202656.1| Arabidopsis thaliana nucleic acid binding AT3G44785 mRNA, complete
           cds
          Length = 228

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 94  atggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgttc 153
           |||| ||||||| | ||||| || | ||| || ||||| || |||||||| || || |||
Sbjct: 1   atggtcgagcacttagcgtcaatatacggaacggagaaagatcgcgtgaattgtcctttc 60

                           
Query: 154 tacttcaagatcggcg 169
           |||||||| |||||||
Sbjct: 61  tacttcaaaatcggcg 76

---

>gb|AC002534.1| Arabidopsis thaliana BAC T32N15 from chromosome III near 54 cM,
             complete sequence
          Length = 101371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 94    atggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgttc 153
             |||| ||||||| | ||||| || | ||| || ||||| || |||||||| || || |||
Sbjct: 31951 atggtcgagcacttagcgtcaatatacggaacggagaaagatcgcgtgaattgtcctttc 32010

                             
Query: 154   tacttcaagatcggcg 169
             |||||||| |||||||
Sbjct: 32011 tacttcaaaatcggcg 32026

---

>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    cagcaagcacggcgaggtcg 379
              ||||||||||||||||||||
Sbjct: 221096 cagcaagcacggcgaggtcg 221077

---

>gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete sequence
          Length = 71353

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ctcctccttctgcttcccct 20
            ||||||||||||||||||||
Sbjct: 4578 ctcctccttctgcttcccct 4597

---

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 371    gcgaggtcgagaacctgcacgtct 394
              ||||||||||||||||||| ||||
Sbjct: 773445 gcgaggtcgagaacctgcaggtct 773422

---

>gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, complete sequence
          Length = 223267

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   gggtggacgcgcagggcaac 294
             ||||||||||||||||||||
Sbjct: 59368 gggtggacgcgcagggcaac 59349

---

>ref|XM_322750.1| Neurospora crassa OR74A hypothetical protein (NCU03493.1) partial
            mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cccctccggctacggcggcg 35
            ||||||||||||||||||||
Sbjct: 2442 cccctccggctacggcggcg 2461

---

>ref|XM_950787.1| Neurospora crassa OR74A hypothetical protein (NCU03493.1) partial
            mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cccctccggctacggcggcg 35
            ||||||||||||||||||||
Sbjct: 2442 cccctccggctacggcggcg 2461

---

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 90      cgccatggccgagcacctcg 109
               ||||||||||||||||||||
Sbjct: 1689382 cgccatggccgagcacctcg 1689363



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ccgtctcgccgacgctgctg 234
              ||||||||||||||||||||
Sbjct: 579575 ccgtctcgccgacgctgctg 579556

---

>gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 241 aacatgtaccagcgccccgacatgatcacccc 272
           |||||||||||||| || || |||||||||||
Sbjct: 173 aacatgtaccagcgtcctgatatgatcacccc 204

---

>ref|XM_566499.1| Cryptococcus neoformans var. neoformans JEC21 tRNA
            (guanine-N2-)-methyltransferase (CNA00760) partial mRNA
          Length = 2163

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  cagcaagcacggcgaggtcg 379
            ||||||||||||||||||||
Sbjct: 1025 cagcaagcacggcgaggtcg 1006

---

>ref|XM_786467.1| PREDICTED: Strongylocentrotus purpuratus similar to U2 small
           nuclear RNA auxillary factor 1 isoform b (LOC586695),
           partial mRNA
          Length = 351

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctg 201
           |||||| | |||||||||||||| || || || || || || ||||| || |||||||| 
Sbjct: 49  aactgctccttctacttcaagattggagcatgtcgtcatggagaccggtgttcccgcctc 108

                   
Query: 202 cacaacaa 209
           ||||||||
Sbjct: 109 cacaacaa 116

---

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 396     cgacaacctcgccgaccacctgat 419
               |||||||||||||||| |||||||
Sbjct: 1030569 cgacaacctcgccgactacctgat 1030546

---

>gb|AY310157.1| Rattus norvegicus Ac1573 mRNA, complete cds
          Length = 2334

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 gcaacatgtaccagcgcccc 258
           ||||||||||||||||||||
Sbjct: 632 gcaacatgtaccagcgcccc 613

---

>ref|XM_964331.1| PREDICTED: Tribolium castaneum similar to Splicing factor U2af 38
           kDa subunit (U2 auxiliary factor 38 kDa subunit) (U2
           snRNP auxiliary factor small subunit) (LOC657904), mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 142 aactgcccgttctacttcaagatcggcgcgtgccggcacggcga 185
           |||||| | ||||||||||| ||||| || |||||||| |||||
Sbjct: 49  aactgctctttctacttcaaaatcggggcttgccggcatggcga 92

---

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     ccagggggcgccgccatggc 98
              ||||||||||||||||||||
Sbjct: 300339 ccagggggcgccgccatggc 300358

---

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   gcacggcgaggtcgagaacc 385
             ||||||||||||||||||||
Sbjct: 58912 gcacggcgaggtcgagaacc 58931

---

>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20
          Length = 122151

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cccctccggctacggcggcg 35
             ||||||||||||||||||||
Sbjct: 45226 cccctccggctacggcggcg 45207

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     gtcgatcttcggcaccgaga 130
               ||||||||||||||||||||
Sbjct: 6258682 gtcgatcttcggcaccgaga 6258701

---

>dbj|AK143290.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
           full-length enriched library, clone:E230035I22
           product:hypothetical protein, full insert sequence
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gggtggacgcgcagggcaac 294
           ||||||||||||||||||||
Sbjct: 618 gggtggacgcgcagggcaac 637

---

>dbj|AK085772.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830007B15 product:unclassifiable, full
           insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gggtggacgcgcagggcaac 294
           ||||||||||||||||||||
Sbjct: 535 gggtggacgcgcagggcaac 554

---

>ref|NM_001033415.1| Mus musculus RIKEN cDNA D830007B15 gene (D830007B15Rik), mRNA
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gggtggacgcgcagggcaac 294
           ||||||||||||||||||||
Sbjct: 618 gggtggacgcgcagggcaac 637

---

>ref|XM_573591.1| PREDICTED: Rattus norvegicus similar to MGC68837 protein
           (LOC498356), mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gggtggacgcgcagggcaac 294
           ||||||||||||||||||||
Sbjct: 92  gggtggacgcgcagggcaac 111

---

>ref|XM_343499.2| PREDICTED: Rattus norvegicus similar to Oligosaccharyl transferase 3
            CG7748-PA (predicted) (LOC363160), mRNA
          Length = 2939

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  gcaacatgtaccagcgcccc 258
            ||||||||||||||||||||
Sbjct: 1237 gcaacatgtaccagcgcccc 1218

---

>emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chromosome 2, complete
             sequence
          Length = 155137

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     cctccttctgcttcccctcc 22
             ||||||||||||||||||||
Sbjct: 77064 cctccttctgcttcccctcc 77083

---

>emb|CT032570.1| Platynereis dumerilii EST IB0AAA36BC01EM1
          Length = 916

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 151 ttctacttcaagatcggcgcgtgccggcacgg 182
           ||||||||||||||||| || || ||||||||
Sbjct: 85  ttctacttcaagatcggagcatgtcggcacgg 116

---

>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence
          Length = 211774

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ctcctccttctgcttcccct 20
              ||||||||||||||||||||
Sbjct: 135447 ctcctccttctgcttcccct 135428

---

>gb|L77234.1|NEUHETC Neurospora crassa glycine-rich protein (het-COR) gene, exons
          Length = 3892

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cccctccggctacggcggcg 35
            ||||||||||||||||||||
Sbjct: 3050 cccctccggctacggcggcg 3069

---

>gb|L37354.1|SERORF1 Saccharopolyspora erythraea ORF1 and ORF4, partial cds, thymidine
           diphosphoglucose 4,6-dehydratase (gdh) and thymidine
           diphospho-4-keto-6-deoxyglucose 3,5-epimerase (kde)
           genes, complete cds
          Length = 3500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 gtggacgcgcagggcaaccc 296
           ||||||||||||||||||||
Sbjct: 330 gtggacgcgcagggcaaccc 311


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,575,321
Number of Sequences: 3902068
Number of extensions: 2575321
Number of successful extensions: 59580
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 58873
Number of HSP's gapped (non-prelim): 704
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---