ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16) (A... 55 4e-16
2POXB_STRPN (Q54970) Pyruvate oxidase (EC 1.2.3.3) (Pyruvic oxida... 32 0.46
3ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-a... 30 1.8
4LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr... 30 1.8
5ARGE_PASMU (Q9CLT9) Acetylornithine deacetylase (EC 3.5.1.16) (A... 30 1.8
6ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino... 30 1.8
7RL10_NANEQ (Q74M84) 50S ribosomal protein L10e 30 3.0
8MANA_PIRSP (P55296) Mannan endo-1,4-beta-mannosidase A precursor... 30 3.0
9MANB_PIRSP (P55297) Mannan endo-1,4-beta-mannosidase B precursor... 30 3.0
10LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr... 29 3.9
11DRR4_PEA (P27047) Disease resistance response protein DRRG49-C 29 3.9
12PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (... 29 5.1
13MANC_PIRSP (P55298) Mannan endo-1,4-beta-mannosidase C precursor... 28 6.7
14PR2_PHAVU (P25986) Pathogenesis-related protein 2 (PvPR2) 28 8.8
15CCNB3_DROME (Q9I7I0) G2/mitotic-specific cyclin-B3 28 8.8
16Y1545_CORGL (Q8NQ93) UPF0210 protein Cgl1545/cg1743 28 8.8

>ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16)|
           (Acetylornithinase) (AO) (N-acetylornithinase) (NAO)
          Length = 448

 Score = 55.1 bits (131), Expect(2) = 4e-16
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 106 LDRDPFVALLAKLIGESQRLQNDPPALVPQEDLVAQHVVDALRPVSTETDGGPLVVRKV 282
           LD   F+ LL KLIGE++ LQN PPAL+P ED   +HV++AL     + +GG L + +V
Sbjct: 10  LDEKRFLTLLGKLIGETENLQNRPPALIPIEDNAGRHVIEALTSY-LKANGGVLALEQV 67



 Score = 47.8 bits (112), Expect(2) = 4e-16
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
 Frame = +3

Query: 312 VEYPGTVPG----RVVSFVGMHMDVVPANPSEWDFDPFSL 419
           +EYPGT  G    + +SFVG H+DVVPA+ + WD +PF L
Sbjct: 82  IEYPGTSKGTSSPKTISFVGSHLDVVPADKTAWDRNPFQL 121



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>POXB_STRPN (Q54970) Pyruvate oxidase (EC 1.2.3.3) (Pyruvic oxidase) (POX)|
          Length = 591

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 270 DERAAIGFRRDRAERVDHVLRHEVLLRNEGRRVVLQA 160
           + + A+GF  DR E +D V+   V L  EG+ VV+ A
Sbjct: 500 EAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDA 536



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>ACY1_PIG (P37111) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 406

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 318 YPGTVPGRVVSFVGMHMDVVPANPSEWDFDPF 413
           +PGT P      +  H DVVP     W  DPF
Sbjct: 64  WPGTNPTLSSILLNSHTDVVPVFKEHWSHDPF 95



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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 418  SEKGSKSHSLGLAGTTSMCMPTKETTR 338
            +++GS S  L   G + +C+PT ETTR
Sbjct: 1831 AQQGSNSCQLNNGGCSQLCLPTSETTR 1857



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>ARGE_PASMU (Q9CLT9) Acetylornithine deacetylase (EC 3.5.1.16)|
           (Acetylornithinase) (AO) (N-acetylornithinase) (NAO)
          Length = 382

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 363 HMDVVPANPSEWDFDPFSLT 422
           H D VP +   W FDPF LT
Sbjct: 79  HTDTVPFDEGRWQFDPFKLT 98



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>ACY1_HUMAN (Q03154) Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid|
           amidohydrolase) (ACY-1)
          Length = 408

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 318 YPGTVPGRVVSFVGMHMDVVPANPSEWDFDPF 413
           +PGT P      +  H DVVP     W  DPF
Sbjct: 65  WPGTNPTLSSILLNSHTDVVPVFKEHWSHDPF 96



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>RL10_NANEQ (Q74M84) 50S ribosomal protein L10e|
          Length = 186

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 252 RWRPARRAEGELHRRPEQRHVEY-PGTVPGRVVSFVGMHMDVVPANPSEWDFD 407
           RW   R+ E    R    ++  Y PG  P  V  F   HM  +  NPSEW ++
Sbjct: 6   RWHCYRKLEVPYTRVSRSKNKNYIPGAKPTMVRLF---HMGELTRNPSEWQYE 55



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>MANA_PIRSP (P55296) Mannan endo-1,4-beta-mannosidase A precursor (EC 3.2.1.78)|
           (Beta-mannanase A) (1,4-beta-D-mannan mannanohydrolase
           A)
          Length = 606

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 207 HEVLLRNEGRRVVLQALGLADQLGEEGDEGVAVQASDGVL 88
           ++ L  N G+R++   +G A Q G+EG E   +Q + G L
Sbjct: 170 YDFLKTNYGKRILSGQVGAAGQAGDEGQEIQRIQKATGKL 209



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>MANB_PIRSP (P55297) Mannan endo-1,4-beta-mannosidase B precursor (EC 3.2.1.78)|
           (Beta-mannanase B) (1,4-beta-D-mannan mannanohydrolase
           B)
          Length = 571

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 207 HEVLLRNEGRRVVLQALGLADQLGEEGDEGVAVQASDGVL 88
           ++ L  N G+R++   +G A Q G+EG E   +Q + G L
Sbjct: 171 YDFLKTNYGKRILSGQVGAAGQAGDEGQEIQRIQKATGKL 210



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>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 418  SEKGSKSHSLGLAGTTSMCMPTKETTR 338
            +++GS S  +   G + +C+PT ETTR
Sbjct: 1831 AQQGSNSCQVNNGGCSQLCLPTSETTR 1857



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>DRR4_PEA (P27047) Disease resistance response protein DRRG49-C|
          Length = 158

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 181 ALVPQEDLVAQHVVDALRPVS-TETDGGPLVVRKVSYTD 294
           ALV   D++   V+DA++ +   E +GGP  ++K+++ +
Sbjct: 22  ALVTDADILTPKVIDAIKSIEIVEGNGGPGTIKKLTFVE 60



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>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 97  VGGLDRDPFV-ALLAKLIGESQRLQNDPPALVPQEDLV 207
           + GLD  P   A L++++GES + Q  P   +PQ+D V
Sbjct: 722 IEGLDESPSRNAALSRIMGESGKYQLSPTVNMPQDDTV 759



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>MANC_PIRSP (P55298) Mannan endo-1,4-beta-mannosidase C precursor (EC 3.2.1.78)|
           (Beta-mannanase C) (1,4-beta-D-mannan mannanohydrolase
           C)
          Length = 569

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 207 HEVLLRNEGRRVVLQALGLADQLGEEGDEGVAVQASDGVL 88
           ++ L  N G+R++   +G A Q G+EG E   +Q + G L
Sbjct: 169 YDFLRSNYGKRILSGQVGGAGQAGDEGQEIQRIQKATGKL 208



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>PR2_PHAVU (P25986) Pathogenesis-related protein 2 (PvPR2)|
          Length = 155

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 181 ALVPQEDLVAQHVVDALRPVS-TETDGGPLVVRKVSYTD 294
           ALV   D +    VD+ + V   E +GGP  ++K+S+ +
Sbjct: 22  ALVKDADTIVPKAVDSFKSVEIVEGNGGPGTIKKISFVE 60



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>CCNB3_DROME (Q9I7I0) G2/mitotic-specific cyclin-B3|
          Length = 575

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +3

Query: 240 LDGNRWRPARRAEGELHRRPEQRH----VEYPGTVPGRVVSFVGMHMDVVPANPSEWDFD 407
           L GN +  ARR   +L ++ EQ+     +  P T P +VV    +  +V   +   WD D
Sbjct: 241 LSGN-FEAARRRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWD-D 298

Query: 408 PFSLT 422
           PF ++
Sbjct: 299 PFQVS 303



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>Y1545_CORGL (Q8NQ93) UPF0210 protein Cgl1545/cg1743|
          Length = 464

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 288 HRRPEQRHVEYPGTVPGRVVSFVGM--HMDVVPAN 386
           H+    R +  PGTVPG  V F G+  +  V+P N
Sbjct: 407 HKTTAVRVIPVPGTVPGDEVDFGGLLGYAPVIPVN 441


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,784,198
Number of Sequences: 219361
Number of extensions: 626866
Number of successful extensions: 2147
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2147
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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