| Clone Name | bast60g09 |
|---|---|
| Clone Library Name | barley_pub |
>VP75_SHV21 (P11282) Probable membrane antigen 75 (Tegument protein)| Length = 1299 Score = 33.1 bits (74), Expect = 0.17 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 330 GNQALQIKPIRQLCHRSPQQLFSCPS 253 GN A+ +K + LC P QL++CPS Sbjct: 1002 GNNAMDLKHLEDLCTHKPLQLYTCPS 1027
>MURD_SALCH (Q57TD2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 438 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 178 GSGCSARTPPCTRCLVAVKLLMYCYGRTRKQL 273 G G SA P TR L ++ +YC+GR QL Sbjct: 346 GDGKSADFSPLTRYLTGDRIRLYCFGRDGAQL 377
>MURD_SALTY (Q8ZRU4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 437 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 178 GSGCSARTPPCTRCLVAVKLLMYCYGRTRKQL 273 G G SA P TR L ++ +YC+GR QL Sbjct: 345 GDGKSADFSPLTRYLTGDRIRLYCFGRDGAQL 376
>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.15) (AtGPAT2) Length = 530 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = -1 Query: 303 IRQLCHRSPQQLF-SCPSITVHQ 238 +R+ CHRSP+Q + CPS +HQ Sbjct: 22 LRRWCHRSPKQKYQKCPSHGLHQ 44
>MURD_SALPA (Q5PDC2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 438 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 178 GSGCSARTPPCTRCLVAVKLLMYCYGRTRKQL 273 G G SA P R L ++ +YC+GR QL Sbjct: 346 GDGKSADFSPLARYLTGDRIRLYCFGRDGAQL 377
>RECF_PASMU (Q9CLQ6) DNA replication and repair protein recF| Length = 358 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%) Frame = -1 Query: 366 HQSSHGITELRDGNQALQI-----KPIRQLCHRSPQQLFSCPSITV 244 HQ S G+ +LR GN ++I I L H P QL + +T+ Sbjct: 79 HQWSVGLQKLRQGNSVVKINGEDGNKIADLAHLLPMQLITPEGLTL 124
>MURD_SALTI (Q8Z9H0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 437 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 178 GSGCSARTPPCTRCLVAVKLLMYCYGRTRKQL 273 G G SA P R L ++ +YC+GR QL Sbjct: 345 GDGKSADFSPLARYLTGDRIRLYCFGRDGAQL 376
>PSAB_AMPCA (P58383) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)| (PSI-B) Length = 644 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -2 Query: 305 PYDSCATDHHSSCFLVLP*QYISSFTATKHLVHGGV 198 PYD AT L + QYI +F AT VHGG+ Sbjct: 296 PYDYLATTS-----LYVHHQYIGAFLATGGFVHGGI 326
>MURD_PHOLL (Q7N145) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 436 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 178 GSGCSARTPPCTRCLVAVKLLMYCYGRTRKQL 273 G G SA P L K+ +YC+GR KQL Sbjct: 344 GDGKSADFSPLKPFLCGNKVQLYCFGRDGKQL 375
>ZMYM6_HUMAN (O95789) Zinc finger MYM-type protein 6 (Zinc finger protein 258)| Length = 723 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 253 HNSTSAVLPPPSTLCTEVSSPSSLNPRDL 167 H+S + + PPP CT S LNP+D+ Sbjct: 124 HSSPACLPPPPKKTCTNCSK-DILNPKDV 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,736,298 Number of Sequences: 219361 Number of extensions: 634315 Number of successful extensions: 1740 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1709 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1740 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)