ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
16PGL_DROME (Q9VZ64) Putative 6-phosphogluconolactonase (EC 3.1.1... 34 0.18
26PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 32 0.70
3SOL3_YEAST (P38858) Probable 6-phosphogluconolactonase 3 (EC 3.1... 30 2.0
46PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 28 7.7

>6PGL_DROME (Q9VZ64) Putative 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 243

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 266 AEENLAVSLAKYTADLSAKFAAERGAFTVVLSGGSLIHALRKLTEAPYLQTVDW 427
           +EE L  +L       S +  A+   F+V LSGGSL+  L K  ++  L+T  W
Sbjct: 15  SEEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSCNLKTAKW 68



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>6PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 257

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 257 IFDAEENLAVSLAKYTADLSAK-FAAERGAFTVVLSGGSLIHALRK 391
           +F + + L  SLA+  A  +A     +RG F + LSGGSL+  L +
Sbjct: 11  VFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLAR 56



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>SOL3_YEAST (P38858) Probable 6-phosphogluconolactonase 3 (EC 3.1.1.31) (6PGL)|
          Length = 280

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 257 IFDAEENLAVSLAKYTADLSAKFAAERGAFTVVLSGGSLIHALRK--LTEAPYLQTVDWT 430
           +F    +L   L ++      +   ++  F V +SGGSLI AL +  + +      V W+
Sbjct: 37  VFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWS 96

Query: 431 KW 436
           KW
Sbjct: 97  KW 98



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>6PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 258

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 257 IFDAEENLAVSLAKYTADLSAK-FAAERGAFTVVLSGGSLIHALRK 391
           +F + + L  +LA+  A  +A   A  R  F + LSGGSL+  L +
Sbjct: 11  VFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLAR 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,917,663
Number of Sequences: 219361
Number of extensions: 340617
Number of successful extensions: 1206
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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