ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote... 32 0.62
2MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3... 31 1.1
3MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3... 30 1.4
4ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr... 28 5.2
5ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr... 28 5.2
6COL19_CAEEL (P18835) Cuticle collagen 19 precursor 28 5.2
7HIS1_THET8 (Q5SM15) ATP phosphoribosyltransferase (EC 2.4.2.17) ... 28 6.8
8HIS1_THET2 (P62381) ATP phosphoribosyltransferase (EC 2.4.2.17) ... 28 6.8
9HSN2_MOUSE (Q6IFS6) Protein HSN2 precursor 28 8.9
10GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensiti... 28 8.9
11HSN2_RAT (Q6IFS7) Protein HSN2 precursor 28 8.9

>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 118 DVPPQPNSPPDNVFRPDRPDKTGP 47
           D PPQP+ P DN  +PD+PD   P
Sbjct: 145 DNPPQPDIPCDNPPQPDQPDDNPP 168



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>MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)|
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP)
          Length = 657

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 112 PPQPNSPPDNVFRPDRPDKTGPWSQKEGT 26
           PP+P  PP    +P+RP K GP  Q   T
Sbjct: 327 PPRPPQPPHPGGKPERPPKPGPPPQPRAT 355



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>MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)|
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2)
          Length = 669

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 112 PPQPNSPPDNVFRPDRPDKTGPWSQKEGT 26
           PP+P  PP    +P+RP K GP  Q   T
Sbjct: 331 PPRPPQPPPPGGKPERPPKPGPPVQPRAT 359



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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 90  LTMSSARIGPIKPGLGAKRRGHAPLPTH 7
           L  S+A  GP  P  GA+   H P+ TH
Sbjct: 452 LANSNAHPGPFPPSTGAQSTAHPPVSTH 479



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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 90  LTMSSARIGPIKPGLGAKRRGHAPLPTH 7
           L  S+A  GP  P  GA+   H P+ TH
Sbjct: 451 LANSNAHPGPFPPSTGAQSTAHPPVSTH 478



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>COL19_CAEEL (P18835) Cuticle collagen 19 precursor|
          Length = 289

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 112 PPQPNSPPDNVFRPDRPDKTGPWSQKEGTCPASDP 8
           P  P   P   ++P +P + GP   +  T PA +P
Sbjct: 199 PAGPRGEPGTEYKPGQPGRPGPQGPRGETGPAGNP 233



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>HIS1_THET8 (Q5SM15) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 206

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 11  VGSGACPLLLAPRPGFIGPIR 73
           +G GAC L L  RPG  GPIR
Sbjct: 89  LGFGACRLSLIRRPGDTGPIR 109



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>HIS1_THET2 (P62381) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 206

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 11  VGSGACPLLLAPRPGFIGPIR 73
           +G GAC L L  RPG  GPIR
Sbjct: 89  LGFGACRLSLIRRPGDTGPIR 109



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>HSN2_MOUSE (Q6IFS6) Protein HSN2 precursor|
          Length = 433

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 148 ILGHLRYLLTDVPPQPNSPPDNVFRPDRPDKT 53
           ++GHL+ L  D  P P SP  ++  P+  D T
Sbjct: 206 LVGHLQNLRLDSGPSPASPLSSISAPNSTDAT 237



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>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein)
          Length = 588

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 17  SGACPLLLAPRPGFIGPIRAEDIVRWGVWLGRHIC 121
           S A P  + P+P    P+  +D+V   V+LGR IC
Sbjct: 464 SSASPTGILPQP----PVNNQDLVMSEVYLGRQIC 494



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>HSN2_RAT (Q6IFS7) Protein HSN2 precursor|
          Length = 434

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 148 ILGHLRYLLTDVPPQPNSPPDNVFRPDRPDKT 53
           ++GHL+ L  D  P P SP  ++  P+  D T
Sbjct: 206 LVGHLQNLRLDSGPSPASPLSSISAPNSTDAT 237


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,425,551
Number of Sequences: 219361
Number of extensions: 578569
Number of successful extensions: 2287
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2282
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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