Clone Information

BLAST Search Result

Clone Name	bast60f10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	197	1e-50
2	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	196	2e-50
3	RS3A_HELAN (P49198) 40S ribosomal protein S3a	192	3e-49
4	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	192	3e-49
5	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	188	5e-48
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	161	8e-40
7	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	157	9e-39
8	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	157	9e-39
9	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	157	9e-39
10	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	157	9e-39
11	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	157	9e-39
12	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	157	9e-39
13	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	157	9e-39
14	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	157	2e-38
15	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	157	2e-38
16	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	157	2e-38
17	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	155	3e-38
18	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	155	3e-38
19	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	155	6e-38
20	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	154	8e-38
21	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	154	8e-38
22	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	153	2e-37
23	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	152	4e-37
24	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	150	2e-36
25	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	147	1e-35
26	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	145	6e-35
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	144	1e-34
28	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	142	3e-34
29	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	141	9e-34
30	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	57	3e-08
31	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	56	5e-08
32	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	55	6e-08
33	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	55	8e-08
34	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	53	3e-07
35	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	53	4e-07
36	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	52	5e-07
37	RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae	52	9e-07
38	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	51	2e-06
39	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	50	2e-06
40	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	50	2e-06
41	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	48	1e-05
42	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	47	2e-05
43	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	44	2e-04
44	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	44	2e-04
45	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	39	0.006
46	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	37	0.023
47	MNR2_YEAST (P35724) Manganese resistance protein MNR2	30	2.2
48	SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sul...	30	2.8
49	LAT_HUMAN (O43561) Linker for activation of T-cells family membe...	30	2.8
50	RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF	30	3.7
51	LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind...	29	4.8
52	RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae	29	6.3
53	HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specif...	29	6.3
54	OR83C_DROME (Q9VNK9) Putative odorant receptor 83c	28	8.2
55	VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein	28	8.2

>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  197 bits (501), Expect = 1e-50
 Identities = 96/106 (90%), Positives = 100/106 (94%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           AVDPF+KK WYD+KAP  FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           AYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHV
Sbjct: 79  AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHV 124

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>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  196 bits (498), Expect = 2e-50
 Identities = 95/105 (90%), Positives = 98/105 (93%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF KK WYDIKAP +F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           YRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHV
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHV 124

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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  192 bits (489), Expect = 3e-49
 Identities = 93/106 (87%), Positives = 99/106 (93%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHV
Sbjct: 79  SYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHV 124

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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  192 bits (488), Expect = 3e-49
 Identities = 94/105 (89%), Positives = 96/105 (91%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF KK WYDIKAP  FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HV
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHV 124

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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  188 bits (478), Expect = 5e-48
 Identities = 89/106 (83%), Positives = 98/106 (92%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED 
Sbjct: 19  AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           ++RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHV
Sbjct: 79  SFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHV 124

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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  161 bits (407), Expect = 8e-40
 Identities = 81/105 (77%), Positives = 88/105 (83%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQNDEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHV
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHV 123

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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 121

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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHV 124

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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (398), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  155 bits (393), Expect = 3e-38
 Identities = 76/105 (72%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  155 bits (393), Expect = 3e-38
 Identities = 76/105 (72%), Positives = 88/105 (83%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK  VFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  155 bits (391), Expect = 6e-38
 Identities = 75/105 (71%), Positives = 88/105 (83%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHI 124

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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  154 bits (390), Expect = 8e-38
 Identities = 72/105 (68%), Positives = 90/105 (85%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPFT+K W+DIKAP  F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ  ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANV 124

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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  154 bits (390), Expect = 8e-38
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHV 124

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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  153 bits (386), Expect = 2e-37
 Identities = 73/105 (69%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RKI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANV 124

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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  152 bits (384), Expect = 4e-37
 Identities = 72/105 (68%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANV 124

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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  150 bits (378), Expect = 2e-36
 Identities = 75/105 (71%), Positives = 88/105 (83%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPFTKK+WYD+KAP +F  R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +RK +L AE+VQG NVLTNF GM  T DKL S+V+KWQTLIEA+V
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANV 124

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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  147 bits (371), Expect = 1e-35
 Identities = 74/107 (69%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQN--DED 313
           VDPFT+K WYD+KAP +F +R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN  D +
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 314 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +++RK +L AE V G +VLTNF GM  TTDKLRS+V KWQTLIE  V
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSV 127

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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  145 bits (365), Expect = 6e-35
 Identities = 73/105 (69%), Positives = 85/105 (80%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E  
Sbjct: 18  AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 451
            +RK +L AEDVQG NVLTNF  M  T DKL S+V+KW TLIEA+
Sbjct: 78  -FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEAN 121

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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  144 bits (363), Expect = 1e-34
 Identities = 73/107 (68%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 313
           VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 314 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
           +++RK RL AEDVQ  NVL NF GMD TTDK RS+V+KWQTLIEA V
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 127

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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  142 bits (359), Expect = 3e-34
 Identities = 67/103 (65%), Positives = 84/103 (81%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF++K+WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 448
           +RK++LR ED+QG + LT+F G+  T+DKLRSLVRKWQT IEA
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEA 122

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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  141 bits (355), Expect = 9e-34
 Identities = 66/104 (63%), Positives = 84/104 (80%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           VDPF++K WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH 451
           +RK++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEAN 123

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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 11  AKDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTK 63

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 64  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRID 106

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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 33/104 (31%), Positives = 55/104 (52%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           D + +K+WY IK+P LF    +G      T  ++     LK RV E ++ +L  D  + Y
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
            K++ + + V G    T F G   TTD +RS++R+  + ++A V
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPV 107

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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 36/101 (35%), Positives = 50/101 (49%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +++
Sbjct: 11  DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSH 63

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 64  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRID 104

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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 10  AKDKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLK 62

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 63  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRID 105

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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 33/103 (32%), Positives = 49/103 (47%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A D +  K+WY + AP  F S+ +G T            E +  RV E +L DL  D  +
Sbjct: 13  AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            + K+  +  DV+G N  T F G       +RSLVR+  T ++
Sbjct: 66  GHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVD 108

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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 31/102 (30%), Positives = 52/102 (50%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           DP+  K+W+ + AP       +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 448
            K++ +   V+G+  LT F G++ T D +RSLVRK  + + A
Sbjct: 73  IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTA 114

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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 32/105 (30%), Positives = 54/105 (51%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           +D +  K+WY+I+AP+      VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+V
Sbjct: 63  NTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANV 107

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>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 33/106 (31%), Positives = 55/106 (51%)
 Frame = +2

Query: 137 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 316
           A D +  K WYDI     +T ++ G  ++ +T     A+  L  R+ E+SL DL N+  +
Sbjct: 15  AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
              ++  + + V G N  + F G D T + L+S VR+ ++ I A V
Sbjct: 68  HMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIV 113

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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 29/100 (29%), Positives = 49/100 (49%)
 Frame = +2

Query: 155 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 334
           +K+WY ++AP  F    +GKT            + +  R  E +L +L ND  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64

Query: 335 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
            +  +V   +  T F   + T D LRSLVR+  + +EA++
Sbjct: 65  FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYI 104

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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 316
           D +T K+W+ + AP  F    +G+T       +K+       R  E +LA+L ND     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 317 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            Y+K+  +   V G N  T FW  + T + L SL R+  + IE
Sbjct: 65  TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIE 107

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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 53/105 (50%)
 Frame = +2

Query: 140 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 319
           +D +  K+WY+I+AP       VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 320 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+V
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANV 107

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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 32/101 (31%), Positives = 49/101 (48%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           D +  K WY I AP +F +  VG+T            E +  RV E +L D+ +D  + +
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            K+  R  DV+G    + F G     D +RSLVR+  + I+
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRID 97

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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           D +  K+W+ I AP  F     G+ ++  T     A++ L  +V E +L DL  D    Y
Sbjct: 9   DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 448
             +  R   V+G  +LT F G + + D +RSLVR+  + I+A
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDA 103

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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 313
           D +  K+WY +  P  F   ++G T    +++T G ++          E +L DL  D  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 314 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEA 448
           Q Y  +  +    +G  ++T F G + + D LRSL+R+  + I +
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINS 104

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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           D +  K+WY I AP +F     G+ L+  T    I ++ L  ++ EV+L DL  D +  Y
Sbjct: 11  DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63

Query: 323 RKIRLRA-EDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
             +  +   ++ G  + T F+G + + D +RSLVR+  + I A V
Sbjct: 64  IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVV 108

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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 26/100 (26%), Positives = 47/100 (47%)
 Frame = +2

Query: 155 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 334
           +K+WY + AP  F    +G+TL           + +  R  + +L+D+++  D    K+ 
Sbjct: 12  EKRWYTVLAPEEFDRAELGETLAEEP-------DQVYDRTIQAALSDVRDGGDNNI-KLT 63

Query: 335 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHV 454
            + +DV   +  T F   + T D  RSLVR+  + +   V
Sbjct: 64  FQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTV 103

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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 26/101 (25%), Positives = 46/101 (45%)
 Frame = +2

Query: 143 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 322
           + + +K WY ++AP    S+ V   L          S  + +RV EV +++L  +  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGE-------DSNSMVNRVVEVPISELTGNFKKSN 64

Query: 323 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIE 445
            K   R  + +G    T F G     D +R LVR+ +  I+
Sbjct: 65  EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERID 105

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>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +2

Query: 188  LFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNV 367
            + +S N  + L+SR+    +A          + +  + ND +    KI +    V  MNV
Sbjct: 871  MVSSLNHYEKLLSRSHSNYLAQ-------INIDMTKVNNDMNDVLGKITILGTIVLPMNV 923

Query: 368  LTNFWGMD 391
            +T  WGM+
Sbjct: 924  ITGLWGMN 931

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>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
 Frame = -3

Query: 158 SW*TDPRPSSCYPSS-------PWRCACSCRPPWLPLRVEW-----RRCGGWSGGLR 24
           +W T   PS+  PSS       PWR   SCRP  L    E      RR G   G LR
Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLR 354

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>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 252 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 142
           EAILVPCVL   +LP L ++ +    +  HC  + GS
Sbjct: 3   EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35

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>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF|
          Length = 365

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -3

Query: 356 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 249
           L  P+     SCR GPHR E  L++  TP    G+SG  R
Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281

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>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1302

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = -3

Query: 137  PSSCYPSS----PWRCACSCRPPWLP 72
            P++C P      P    C CRPPW+P
Sbjct: 1088 PAACRPGRCVNLPGSYRCECRPPWVP 1113

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>RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/92 (23%), Positives = 40/92 (43%)
 Frame = +2

Query: 155 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 334
           +K W+ IKAP +F    +G+T   +        E +  R  E+++A + N+      K  
Sbjct: 12  RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64

Query: 335 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKW 430
            +   V+G    T   G+        S+++KW
Sbjct: 65  FKITKVEGTTAKTELEGIKM----YESIIQKW 92

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>HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specific,|
           mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic
           acid synthase) (Delta-aminolevulinate synthase)
           (Delta-ALA synthetase) (ALAS-E)
          Length = 583

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 201 RLVKSSGALMSYHCFLVNGSTAFFLLPFLP 112
           RL +  GAL+   CF+ N ST F L   LP
Sbjct: 240 RLHQKDGALVFSSCFVANDSTLFTLAKMLP 269

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>OR83C_DROME (Q9VNK9) Putative odorant receptor 83c|
          Length = 397

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 359 MNVLTNFWGMDFTTDKLRSLVRKWQTL 439
           +N LTN  G+DF + KL+   R W T+
Sbjct: 18  INSLTNLLGVDFLSPKLKFNYRTWTTI 44

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>VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein|
          Length = 400

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 254 LRQSWYPVSWTRGSCRRCG 198
           L   WYP S TRG+C  CG
Sbjct: 143 LGADWYPKSRTRGTCGYCG 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,287,410
Number of Sequences: 219361
Number of extensions: 1238583
Number of successful extensions: 3849
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3821
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result