ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYSP1_HORVU (P25249) Cysteine proteinase EP-B 1 precursor (EC 3.... 30 2.4
2CYSP2_HORVU (P25250) Cysteine proteinase EP-B 2 precursor (EC 3.... 30 2.4

>CYSP1_HORVU (P25249) Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-)|
          Length = 371

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 110 MGLLSKKLLIASMVA 154
           MGLLSKKLL+ASMVA
Sbjct: 1   MGLLSKKLLVASMVA 15



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>CYSP2_HORVU (P25250) Cysteine proteinase EP-B 2 precursor (EC 3.4.22.-)|
          Length = 373

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 110 MGLLSKKLLIASMVA 154
           MGLLSKKLL+ASMVA
Sbjct: 1   MGLLSKKLLVASMVA 15


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,750,672
Number of Sequences: 219361
Number of extensions: 220141
Number of successful extensions: 465
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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