ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast60f03 |
|---|---|
| Clone Library Name | barley_pub |
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 38.9 bits (89), Expect = 0.005 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 268 YVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 Y++ +G+PAQP +DT +D W C PC Sbjct: 95 YLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPC 126
>RENI_RAT (P08424) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 402 Score = 33.9 bits (76), Expect = 0.15 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 208 KAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPCG 366 K++ T VTS V + Y G+G+P+Q + DT + W + CG Sbjct: 64 KSSFTNVTSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCG 116
>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)| (Nepenthesin-II) Length = 438 Score = 33.5 bits (75), Expect = 0.20 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 214 ASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 +S+G+ + PV +G Y++ +G+P +DT +D W C PC Sbjct: 81 SSSGIET-PVYAGDG--EYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPC 127
>CARP_RHIMI (P00799) Mucorpepsin precursor (EC 3.4.23.23) (Mucor rennin)| Length = 430 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = +1 Query: 205 SKAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 S+AA+ G P Y + +G+P Q LL DT + TW C Sbjct: 68 SEAAADGSVDTPGYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGC 120
>CARP_IRPLA (P17576) Polyporopepsin (EC 3.4.23.29) (Aspartic proteinase)| Length = 340 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = +1 Query: 244 ASGQTPPS-----YVVRAGLGSPAQPVLLALDTSADATW 345 A+G P + YVV G+GSPA L +DT + TW Sbjct: 1 AAGSVPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTW 39
>PTW3C_ECOLI (P09323) PTS system N-acetylglucosamine-specific EIICBA component| (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine permease IIC component (PTS system N-acetylglucosamine-specific EIIC component); N-acetylglucosamine-specific phosphotrans Length = 648 Score = 31.2 bits (69), Expect = 0.99 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 202 SSKAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWA 348 ++ A +T T+APVA Q P+ V A L SP ++ALD D +A Sbjct: 473 AASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFA 521
>RENI_CALJA (Q9TSZ1) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 400 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/52 (25%), Positives = 22/52 (42%) Frame = +1 Query: 208 KAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 + A +TS+ + + Y G+G+P Q + DT + W S C Sbjct: 60 RMALVNITSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKC 111
>NEP1_NEPDI (P69476) Aspartic proteinase nepenthesin-1 (EC 3.4.23.-)| (Nepenthesin-I) (Fragments) Length = 164 Score = 30.8 bits (68), Expect = 1.3 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 Query: 268 YVVRAGLGSPAQPVLLALDTSADATWAHCSP 360 Y++ +G+PAQP +DT +D W P Sbjct: 17 YLMXLSIGTPAQPFSAIMDTGSDLIWTQXQP 47
>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)| (Nucellin-like protein) Length = 410 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 268 YVVRAGLGSPAQPVLLALDTSADATWAHCS-PC 363 + V + PA+P L +DT + TW C PC Sbjct: 38 FFVTMNISDPAKPYFLDIDTGSTLTWLQCDYPC 70
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 30.0 bits (66), Expect = 2.2 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 15/62 (24%) Frame = +1 Query: 202 SSKAASTGVTSAPVASGQTPPSYVVRA---------------GLGSPAQPVLLALDTSAD 336 SS A+S S+ ++S +PPS A GLG P +PVL+A S Sbjct: 18 SSAASSVTSASSSLSSSPSPPSVAASAATLVSGGVAPAAGSGGLGGPGRPVLVAAAVSGS 77 Query: 337 AT 342 A+ Sbjct: 78 AS 79
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 29.3 bits (64), Expect = 3.7 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 15/54 (27%) Frame = +1 Query: 202 SSKAASTGVTSAPVASGQTPPSYVVRA---------------GLGSPAQPVLLA 318 SS A+S S+ ++S +PPS V A GLG P +PVL+A Sbjct: 18 SSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPVLVA 71
>RENI_MACMU (Q6DLW5) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 406 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/52 (25%), Positives = 21/52 (40%) Frame = +1 Query: 208 KAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 + A TS+ + + Y G+G+P Q + DT + W S C Sbjct: 66 RLALGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKC 117
>RENI_MACFA (Q6DLS0) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 406 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/52 (25%), Positives = 21/52 (40%) Frame = +1 Query: 208 KAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 + A TS+ + + Y G+G+P Q + DT + W S C Sbjct: 66 RLALGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKC 117
>PRD_DROME (P06601) Segmentation protein paired| Length = 613 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +1 Query: 118 HNVHPPSASPLESIISXXXXXXXXXXFLSSKAASTGVTSAPVA-SGQTPPSYVVRAGLGS 294 H P + SP ES+ S LS+ + GVTS+ A SG P + A GS Sbjct: 407 HQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANASAGS 466 Query: 295 PAQPVLLALDT 327 L +++ Sbjct: 467 EELSAALKVES 477
>RENI_PANTR (P60016) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 406 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +1 Query: 229 TSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 TS+ + + Y G+G+P Q + DT + W S C Sbjct: 73 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKC 117
>RENI_HUMAN (P00797) Renin precursor (EC 3.4.23.15) (Angiotensinogenase)| Length = 406 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +1 Query: 229 TSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCSPC 363 TS+ + + Y G+G+P Q + DT + W S C Sbjct: 73 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKC 117
>CARP_PODAN (O13340) Podosporapepsin precursor (EC 3.4.23.-)| Length = 425 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +1 Query: 229 TSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATWAHCS 357 ++A + + +YV +G+P Q ++L LDT + W S Sbjct: 95 SAAAIPINEVDIAYVTPVTIGTPPQTLMLDLDTGSSDLWVFSS 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.124 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,381,867 Number of Sequences: 219361 Number of extensions: 288484 Number of successful extensions: 932 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 932 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
