Clone Name	bast60e11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA	319	4e-84
2	dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clon...	319	4e-84
3	gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-...	274	2e-70
4	ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA	270	4e-69
5	dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clon...	270	4e-69
6	dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clon...	270	4e-69
7	gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRN...	268	1e-68
8	gb|AY103674.1| Zea mays PCO104001 mRNA sequence	268	1e-68
9	gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like prote...	155	1e-34
10	gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, com...	149	9e-33
11	gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence	147	4e-32
12	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	127	3e-26
13	gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom...	127	3e-26
14	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	127	3e-26
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	121	2e-24
16	dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D...	121	2e-24
17	dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein,...	121	2e-24
18	gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA	109	8e-21
19	gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence	98	3e-17
20	ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6...	94	5e-16
21	gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989)...	94	5e-16
22	gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S...	94	5e-16
23	gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S...	94	5e-16
24	emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Co...	94	5e-16
25	gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6...	94	5e-16
26	gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, ...	92	2e-15
27	emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribos...	90	7e-15
28	dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clon...	80	7e-12
29	emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ...	78	3e-11
30	emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B...	78	3e-11
31	emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal ...	72	2e-09
32	dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone...	68	3e-08
33	ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural consti...	64	4e-07
34	gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete se...	64	4e-07
35	gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clon...	64	4e-07
36	gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c...	64	4e-07
37	gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c...	64	4e-07
38	gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-3...	64	4e-07
39	gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c...	64	4e-07
40	emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Co...	64	4e-07
41	emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Co...	64	4e-07
42	emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal pr...	64	4e-07
43	emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B...	62	2e-06
44	emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6	62	2e-06
45	emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
46	gb|BC061628.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA...	48	0.025
47	gb|BC082345.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA...	48	0.025
48	ref|NM_203821.1| Xenopus tropicalis 40S ribosomal protein S6 (MG...	48	0.025
49	emb|CR760876.2| Xenopus tropicalis finished cDNA, clone TTpA006h06	48	0.025
50	gb|AY521658.1| Pseudopleuronectes americanus 40S ribosomal prote...	46	0.097
51	ref|NM_061034.3| Caenorhabditis elegans Ribosomal Protein, Small...	46	0.097
52	gb|AF429980.1| Spodoptera frugiperda ribosomal protein S6 mRNA, ...	46	0.097
53	emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, com...	46	0.097
54	ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA	44	0.38
55	emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp...	44	0.38
56	gb|AF402814.1| Ictalurus punctatus 40S ribosomal protein S6 mRNA...	44	0.38
57	dbj|AK108193.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.38
58	gb|BC041281.1| Xenopus laevis ribosomal protein S6, mRNA (cDNA c...	42	1.5
59	emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chr...	42	1.5
60	emb|AL353193.7| Human DNA sequence from clone RP11-137F15 on chr...	42	1.5
61	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.5
62	emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Co...	42	1.5
63	gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-1...	42	1.5
64	dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D...	42	1.5
65	dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.5
66	dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.5
67	dbj|AK105567.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.5
68	gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG...	40	6.0
69	gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence	40	6.0
70	gb|AC009259.8| Trypanosoma brucei chromosome 6 clone RPCI93-4F7,...	40	6.0
71	gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G...	40	6.0
72	gb|AY190727.1| Pagrus major S6 ribosomal protein mRNA, partial cds	40	6.0
73	gb|AY430215.1| Spirinchus thaleichthys recombination activating ...	40	6.0
74	gb|AY380539.1| Salangichthys microdon recombination-activating p...	40	6.0
75	gb|AY380538.1| Hypomesus olidus recombination-activating protein...	40	6.0
76	gb|AY380537.1| Thaleichthys pacificus recombination-activating p...	40	6.0
77	gb|AY380536.1| Plecoglossus altivelis recombination-activating p...	40	6.0
78	gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome...	40	6.0
79	ref|NM_012652.1| Rattus norvegicus solute carrier family 9, memb...	40	6.0
80	ref|XM_821548.1| Trypanosoma brucei TREU927 clone RPCI93-4F7 hyp...	40	6.0
81	emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch...	40	6.0
82	ref|NM_016981.1| Mus musculus solute carrier family 9 (sodium/hy...	40	6.0
83	gb|BC052708.1| Mus musculus solute carrier family 9 (sodium/hydr...	40	6.0
84	gb|BC051431.1| Mus musculus solute carrier family 9 (sodium/hydr...	40	6.0
85	gb|AF472590.1| Sinorhizobium meliloti JJ1c10 hypothetical transm...	40	6.0
86	dbj|AK154857.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	40	6.0
87	dbj|AK150135.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	40	6.0
88	dbj|AK162209.1| Mus musculus in vitro fertilized eggs cDNA, RIKE...	40	6.0
89	gb|BC004687.1| Mus musculus solute carrier family 9 (sodium/hydr...	40	6.0
90	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.0
91	gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, comple...	40	6.0
92	gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosom...	40	6.0
93	gb|AY130373.1| Petromyzon marinus ribosomal protein S6-like mRNA...	40	6.0
94	gb|AY130372.1| Myxine glutinosa ribosomal protein S6-like mRNA, ...	40	6.0
95	gb|AF009665.1|AF009665 Oncorhynchus mykiss S6 ribosomal protein ...	40	6.0
96	emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chr...	40	6.0
97	gb|M85299.1|RATNHEXI Rat sodium/hydrogen exchange protein-isofor...	40	6.0
98	gb|U51112.1|MMU51112 Mus musculus Na+/H+ exchanger (NHE-1) mRNA,...	40	6.0

---

>ref|NM_189879.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score =  319 bits (161), Expect = 4e-84
 Identities = 323/377 (85%)
 Strand = Plus / Plus

                                                                       
Query: 68  gctcgcggcccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaacccca 127
           |||||| ||||||||||| |||| ||  |   ||||||||||| |||||||||||||| |
Sbjct: 57  gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 116

                                                                       
Query: 128 ccacggggtgccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatg 187
           |||| ||||||||||||||| | ||||||||||||||||||||||||||     ||| ||
Sbjct: 117 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 176

                                                                       
Query: 188 acaagagaatctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctata 247
           ||||||| ||||| ||||||||   ||| |||  |||||| ||||||||| |||||||| 
Sbjct: 177 acaagaggatctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatg 236

                                                                       
Query: 248 tcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaa 307
           |||||||||||||||| || || || |||||||| ||||| |||||||| |||||||| |
Sbjct: 237 tcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctca 296

                                                                       
Query: 308 ctcctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggca 367
           || |||| || || |||||||| ||||||||||||||| ||||||| |||||  ||||||
Sbjct: 297 ctgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggca 356

                                                                       
Query: 368 ggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctat 427
           |||||| |||||||||| ||||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 357 ggcgtgatggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctat 416

                            
Query: 428 ctgttatcaacttggtg 444
           ||||||| |||||||||
Sbjct: 417 ctgttattaacttggtg 433

---

>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
           insert sequence
          Length = 1078

 Score =  319 bits (161), Expect = 4e-84
 Identities = 323/377 (85%)
 Strand = Plus / Plus

                                                                       
Query: 68  gctcgcggcccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaacccca 127
           |||||| ||||||||||| |||| ||  |   ||||||||||| |||||||||||||| |
Sbjct: 58  gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 117

                                                                       
Query: 128 ccacggggtgccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatg 187
           |||| ||||||||||||||| | ||||||||||||||||||||||||||     ||| ||
Sbjct: 118 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 177

                                                                       
Query: 188 acaagagaatctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctata 247
           ||||||| ||||| ||||||||   ||| |||  |||||| ||||||||| |||||||| 
Sbjct: 178 acaagaggatctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatg 237

                                                                       
Query: 248 tcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaa 307
           |||||||||||||||| || || || |||||||| ||||| |||||||| |||||||| |
Sbjct: 238 tcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctca 297

                                                                       
Query: 308 ctcctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggca 367
           || |||| || || |||||||| ||||||||||||||| ||||||| |||||  ||||||
Sbjct: 298 ctgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggca 357

                                                                       
Query: 368 ggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctat 427
           |||||| |||||||||| ||||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 358 ggcgtgatggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctat 417

                            
Query: 428 ctgttatcaacttggtg 444
           ||||||| |||||||||
Sbjct: 418 ctgttattaacttggtg 434

---

>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds
          Length = 1039

 Score =  274 bits (138), Expect = 2e-70
 Identities = 294/346 (84%)
 Strand = Plus / Plus

                                                                       
Query: 99  caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 158
           |||||||||||| ||||||||||||||  |||| |||||||| |||||| |||| |||||
Sbjct: 66  caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 125

                                                                       
Query: 159 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 218
           ||||||||||||||||||   | ||||||||   || || |||||||||||   ||||||
Sbjct: 126 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 185

                                                                       
Query: 219 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 278
           |  |||||||||||| ||| |||| ||| ||||||||||||||||||| || || |||||
Sbjct: 186 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 245

                                                                       
Query: 279 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 338
            |||||||||||||||||||||||  | ||| |||| || ||||| |||||||| || ||
Sbjct: 246 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 305

                                                                       
Query: 339 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 398
           ||| ||  | ||||| |||||  |||||||||||  |||||||||| |||||||||||||
Sbjct: 306 ggggactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 365

                                                         
Query: 399 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
            ||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 366 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtg 411

---

>ref|XM_470801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score =  270 bits (136), Expect = 4e-69
 Identities = 292/344 (84%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 160
           |||||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||
Sbjct: 40  ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 99

                                                                       
Query: 161 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 220
           ||||||||||||| ||     ||||||||||||| ||||||||||| ||   ||||||| 
Sbjct: 100 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 159

                                                                       
Query: 221 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 280
            ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| |
Sbjct: 160 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 219

                                                                       
Query: 281 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 340
           | ||||| |||||||| || ||||| ||| |||| || || |||||||| || |||||||
Sbjct: 220 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 279

                                                                       
Query: 341 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 400
           | ||  | ||||| |||||| |||||||||||| |||||||||| | |||||||| || |
Sbjct: 280 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 339

                                                       
Query: 401 gtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
           ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 340 gtggttgcattgtcagccaagatctctctgttatcaacttggtg 383

---

>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
           insert sequence
          Length = 1018

 Score =  270 bits (136), Expect = 4e-69
 Identities = 292/344 (84%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 160
           |||||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||
Sbjct: 38  ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 97

                                                                       
Query: 161 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 220
           ||||||||||||| ||     ||||||||||||| ||||||||||| ||   ||||||| 
Sbjct: 98  acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 157

                                                                       
Query: 221 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 280
            ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| |
Sbjct: 158 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 217

                                                                       
Query: 281 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 340
           | ||||| |||||||| || ||||| ||| |||| || || |||||||| || |||||||
Sbjct: 218 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 277

                                                                       
Query: 341 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 400
           | ||  | ||||| |||||| |||||||||||| |||||||||| | |||||||| || |
Sbjct: 278 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 337

                                                       
Query: 401 gtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
           ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 338 gtggttgcattgtcagccaagatctctctgttatcaacttggtg 381

---

>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
           insert sequence
          Length = 990

 Score =  270 bits (136), Expect = 4e-69
 Identities = 292/344 (84%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 160
           |||||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||
Sbjct: 37  ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 96

                                                                       
Query: 161 acgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatc 220
           ||||||||||||| ||     ||||||||||||| ||||||||||| ||   ||||||| 
Sbjct: 97  acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 156

                                                                       
Query: 221 ttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagg 280
            ||| || || |||||| |||||||| | |||||||||||||| ||||| || ||||| |
Sbjct: 157 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 216

                                                                       
Query: 281 gcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggg 340
           | ||||| |||||||| || ||||| ||| |||| || || |||||||| || |||||||
Sbjct: 217 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 276

                                                                       
Query: 341 gcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttc 400
           | ||  | ||||| |||||| |||||||||||| |||||||||| | |||||||| || |
Sbjct: 277 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 336

                                                       
Query: 401 gtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
           ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 337 gtggttgcattgtcagccaagatctctctgttatcaacttggtg 380

---

>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds
          Length = 1023

 Score =  268 bits (135), Expect = 1e-68
 Identities = 309/367 (84%)
 Strand = Plus / Plus

                                                                       
Query: 77  ccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaaccccaccacggggt 136
           ||||||||| |||| |||||  |||||||||||| ||||||||||||||  | || ||||
Sbjct: 43  ccgcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggt 102

                                                                       
Query: 137 gccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatgacaagagaa 196
           ||||||||||| |||| ||||||||||||||||| || ||   | ||||||||   || |
Sbjct: 103 gccagaagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaagga 162

                                                                       
Query: 197 tctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctatatcttcaaga 256
           |||||||||||||   |||||||  |||||||||||| ||  |||| ||| |||||||||
Sbjct: 163 tctcccaggaggtcagtggtgatgctctgggtgaggagtttaagggttatgtcttcaaga 222

                                                                       
Query: 257 tcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaactcctgggc 316
           |||||||||| || || || || ||||||||||||||||||||||| || ||| |||| |
Sbjct: 223 tcatgggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtc 282

                                                                       
Query: 317 gcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcaggcgtgttg 376
           | || ||||||||||| ||||| |||||  | ||||| || ||  |||||||||||  ||
Sbjct: 283 gtgtccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatg 342

                                                                       
Query: 377 gtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatctgttatca 436
           |||||||| ||||||||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 343 gtgagcgcaggaggaagtctgtccgtggttgtattgtgagccaagacctatctgttatca 402

                  
Query: 437 acttggt 443
           |||||||
Sbjct: 403 acttggt 409

---

>gb|AY103674.1| Zea mays PCO104001 mRNA sequence
          Length = 1198

 Score =  268 bits (135), Expect = 1e-68
 Identities = 309/367 (84%)
 Strand = Plus / Plus

                                                                       
Query: 77  ccgcgagcttgcgcagcaacttcaccatgaagttgaacatcgcgaaccccaccacggggt 136
           ||||||||| |||| |||||  |||||||||||| ||||||||||||||  | || ||||
Sbjct: 171 ccgcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggt 230

                                                                       
Query: 137 gccagaagaaggtggagatcgatgacgaccagaagctgcgaaacctttatgacaagagaa 196
           ||||||||||| |||| ||||||||||||||||| || ||   | ||||||||   || |
Sbjct: 231 gccagaagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaagga 290

                                                                       
Query: 197 tctcccaggaggtagttggtgatcttctgggtgaggaattcgagggctatatcttcaaga 256
           |||||||||||||   |||||||  |||||||||||| ||  |||| ||| |||||||||
Sbjct: 291 tctcccaggaggtcagtggtgatgctctgggtgaggagtttaagggttatgtcttcaaga 350

                                                                       
Query: 257 tcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaactcctgggc 316
           |||||||||| || || || || ||||||||||||||||||||||| || ||| |||| |
Sbjct: 351 tcatgggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtc 410

                                                                       
Query: 317 gcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcaggcgtgttg 376
           | || ||||||||||| ||||| |||||  | ||||| || ||  |||||||||||  ||
Sbjct: 411 gtgtccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatg 470

                                                                       
Query: 377 gtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatctgttatca 436
           |||||||| ||||||||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 471 gtgagcgcaggaggaagtctgtccgtggttgtattgtgagccaagacctatctgttatca 530

                  
Query: 437 acttggt 443
           |||||||
Sbjct: 531 acttggt 537

---

>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete
           cds
          Length = 1032

 Score =  155 bits (78), Expect = 1e-34
 Identities = 255/314 (81%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| ||||| |||||||| || || ||||||||||||||| | ||||||||||| 
Sbjct: 52  atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 111

                                                                       
Query: 163 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 222
           |||||||| || |||    | ||||||||||| ||||||||||||||    || |||  |
Sbjct: 112 gaccagaaactccgagctttctatgacaagaggatctcccaggaggttagcggagatgct 171

                                                                       
Query: 223 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 282
            |||| ||||| ||| |||| ||  | |||||||| ||||| || || || ||||| || 
Sbjct: 172 ttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaaggt 231

                                                                       
Query: 283 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 342
           |||||||||||||| |||||| ||||||| || || ||||| ||||||||| |||| |||
Sbjct: 232 ttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgctttacagaggc 291

                                                                       
Query: 343 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 402
           ||  ||||||| ||||| ||||| ||||||  |||||||||  | ||||||||||| |||
Sbjct: 292 actccttgcttccgtggtcatggtaggcgtaatggtgagcgaagaaggaagtctgtccgt 351

                         
Query: 403 ggttgcattgtcag 416
           || ||||| |||||
Sbjct: 352 ggatgcatcgtcag 365

---

>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 1020

 Score =  149 bits (75), Expect = 9e-33
 Identities = 273/339 (80%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| ||||||||||| |||||||| || |||||||||||| | |||||||| |||
Sbjct: 63  atgaagttcaacatcgcgaatcccaccactggatgccagaagaagctcgagatcgacgac 122

                                                                       
Query: 163 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 222
           || | ||| ||||||    |||  |||||||| ||||| ||||||||  | || |||   
Sbjct: 123 gatctgaaactgcgagcattttgggacaagaggatctcacaggaggtcatcggagatgca 182

                                                                       
Query: 223 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 282
           || |||||||||||  |||||||| ||||||| || |  || || || || || || || 
Sbjct: 183 ctcggtgaggaatttaagggctatgtcttcaaaattaccggaggttgtgacaaacaagga 242

                                                                       
Query: 283 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 342
           || ||||||||||| |||||||| |||||||| || ||| | ||| ||||||||||||| 
Sbjct: 243 tttccaatgaagcagggagtgctgactcctggtcgtgttagacttttgcttcacagggga 302

                                                                       
Query: 343 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 402
           ||  ||||||| |||||| |||| ||||||  ||| |||||  |||| ||||||||||||
Sbjct: 303 actccttgcttccgtggatatggaaggcgtaatggagagcgtaggagaaagtctgttcgt 362

                                                  
Query: 403 ggttgcattgtcagccaagatctatctgttatcaacttg 441
           || ||||||||||||| ||| || |||||| | ||||||
Sbjct: 363 gggtgcattgtcagcccagacctctctgttttgaacttg 401

---

>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence
          Length = 1065

 Score =  147 bits (74), Expect = 4e-32
 Identities = 254/314 (80%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| ||||| |||||||| || || ||||||||||||||| | ||||||||||| 
Sbjct: 72  atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 131

                                                                       
Query: 163 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 222
           |||||||| || |||    | | ||||||||| ||||||||||||||    || |||  |
Sbjct: 132 gaccagaaactccgagctttctttgacaagaggatctcccaggaggttagcggagatgct 191

                                                                       
Query: 223 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 282
            |||| ||||| ||| |||| ||  | |||||||| ||||| || || || ||||| || 
Sbjct: 192 ttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaaggt 251

                                                                       
Query: 283 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 342
           |||||||||||||| |||||| ||||||| || || ||||| |||||||||||||| |||
Sbjct: 252 ttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgcttcacagaggc 311

                                                                       
Query: 343 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 402
           ||  ||||||| |||||  |||| ||||||  ||||||  | || ||||||||||| |||
Sbjct: 312 actccttgcttccgtggttatggtaggcgtaatggtgaaagacgaaggaagtctgtccgt 371

                         
Query: 403 ggttgcattgtcag 416
           || |||||||||||
Sbjct: 372 ggatgcattgtcag 385

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                            
Query: 349      tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 408
                ||||| |||||| |||||||||||| |||||||||| | |||||||| || |||||||||
Sbjct: 15461353 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15461294

                                                    
Query: 409      attgtcagccaagatctatctgttatcaacttggtg 444
                ||||||||||||||||| ||||||||||||||||||
Sbjct: 15461293 attgtcagccaagatctctctgttatcaacttggtg 15461258



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 107      agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
                |||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475

                        
Query: 167      agaagctg 174
                ||||||||
Sbjct: 15462474 agaagctg 15462467



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                            
Query: 230      aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
                |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| |
Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508

                                                                    
Query: 290      tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 341
                ||||||| || ||||| ||| |||| || || |||||||| || ||||||||
Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 182      tttatgacaagagaatctcccagga 206
                ||||||||||||| |||||||||||
Sbjct: 15461701 tttatgacaagaggatctcccagga 15461677

---

>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Plus

                                                                         
Query: 349   tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 408
             ||||| |||||| |||||||||||| |||||||||| | |||||||| || |||||||||
Sbjct: 40173 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 40232

                                                 
Query: 409   attgtcagccaagatctatctgttatcaacttggtg 444
             ||||||||||||||||| ||||||||||||||||||
Sbjct: 40233 attgtcagccaagatctctctgttatcaacttggtg 40268



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 107   agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
             |||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051

                     
Query: 167   agaagctg 174
             ||||||||
Sbjct: 39052 agaagctg 39059



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                         
Query: 230   aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
             |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| |
Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018

                                                                 
Query: 290   tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 341
             ||||||| || ||||| ||| |||| || || |||||||| || ||||||||
Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   tttatgacaagagaatctcccagga 206
             ||||||||||||| |||||||||||
Sbjct: 39825 tttatgacaagaggatctcccagga 39849

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                            
Query: 349      tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 408
                ||||| |||||| |||||||||||| |||||||||| | |||||||| || |||||||||
Sbjct: 15455887 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15455828

                                                    
Query: 409      attgtcagccaagatctatctgttatcaacttggtg 444
                ||||||||||||||||| ||||||||||||||||||
Sbjct: 15455827 attgtcagccaagatctctctgttatcaacttggtg 15455792



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 107      agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
                |||| |||||||| ||||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009

                        
Query: 167      agaagctg 174
                ||||||||
Sbjct: 15457008 agaagctg 15457001



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                            
Query: 230      aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
                |||||||| |||||||| | |||||||||||||| ||||| || ||||| || ||||| |
Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042

                                                                    
Query: 290      tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 341
                ||||||| || ||||| ||| |||| || || |||||||| || ||||||||
Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 182      tttatgacaagagaatctcccagga 206
                ||||||||||||| |||||||||||
Sbjct: 15456235 tttatgacaagaggatctcccagga 15456211

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 2e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                            
Query: 340      ggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgtt 399
                |||||| ||||||| |||||  |||||||||||| |||||||||| ||||||||||||| 
Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 25670930

                                                             
Query: 400      cgtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
                ||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 25670931 cgtggttgcatcgtcagccaggacctatctgttattaacttggtg 25670975



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                            
Query: 230      aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
                |||||||| |||||||| |||||||||||||||| || || || |||||||| ||||| |
Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740

                                                                    
Query: 290      tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 341
                ||||||| |||||||| ||| |||| || || |||||||| |||||||||||
Sbjct: 25670741 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 25670792



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                            
Query: 107      agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
                |||| |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577

                        
Query: 167      agaagctg 174
                ||||||||
Sbjct: 25669578 agaagctg 25669585

---

>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score =  121 bits (61), Expect = 2e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                          
Query: 340    ggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgtt 399
              |||||| ||||||| |||||  |||||||||||| |||||||||| ||||||||||||| 
Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 124903

                                                           
Query: 400    cgtggttgcattgtcagccaagatctatctgttatcaacttggtg 444
              ||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 124904 cgtggttgcatcgtcagccaggacctatctgttattaacttggtg 124948



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                          
Query: 230    aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
              |||||||| |||||||| |||||||||||||||| || || || |||||||| ||||| |
Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713

                                                                  
Query: 290    tgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacagggg 341
              ||||||| |||||||| ||| |||| || || |||||||| |||||||||||
Sbjct: 124714 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 124765



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                          
Query: 107    agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
              |||| |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550

                      
Query: 167    agaagctg 174
              ||||||||
Sbjct: 123551 agaagctg 123558

---

>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds
          Length = 426

 Score =  121 bits (61), Expect = 2e-24
 Identities = 157/189 (83%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           ||||||||||||||||| || || ||||| || ||||| |||||||| |||||  |||||
Sbjct: 97  ttcaagatcatgggtgggtgtgacaagcaaggtttccctatgaagcagggagttttaact 156

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           ||||| || ||||||||| |||||||| | || ||  |||||||| | |||||||| |||
Sbjct: 157 cctggccgtgttcgccttttgcttcaccgaggaactccttgctttagaggacatgggagg 216

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||| ||| |  | || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 217 aggactggagagaggagaagaaagtctgttcgtggttgcattgtcagccaagatctctct 276

                    
Query: 430 gttatcaac 438
           ||| |||||
Sbjct: 277 gttctcaac 285

---

>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA
          Length = 1056

 Score =  109 bits (55), Expect = 8e-21
 Identities = 151/183 (82%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||| ||||| || || || ||||| || |||||||||||||| |||||| |||||
Sbjct: 195 ttcaagataatgggaggatgtgacaagcaagggttcccaatgaagcagggagtgttaact 254

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           ||||| || ||||||||| ||||  |||| || ||  ||||||| ||||| ||||| |||
Sbjct: 255 cctggccgtgttcgccttttgctctacagaggtactccttgcttccgtggtcatggtagg 314

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
           ||   ||| |||||| | ||||||||||| ||||| |||||||||||||  ||||| |||
Sbjct: 315 cgaaatggagagcgcagaaggaagtctgtccgtggatgcattgtcagccctgatctttct 374

              
Query: 430 gtt 432
           |||
Sbjct: 375 gtt 377

---

>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence
          Length = 1067

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 169/209 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 tgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggct 283
           |||||||||| ||| |||| ||  | |||||||| ||||| || || || ||||| || |
Sbjct: 185 tgggtgaggagttcaagggttacgttttcaagataatgggaggatgtgacaagcaagggt 244

                                                                       
Query: 284 tcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggca 343
           |||| ||||| || |||||| |||||||||| || ||||||||| |||| ||||| || |
Sbjct: 245 tccctatgaaacagggagtgttaactcctggccgtgttcgccttttgctccacagaggta 304

                                                                       
Query: 344 catcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtg 403
           |  ||||||| |||||  |||| |||||   ||| |||||| | ||||||||||| ||||
Sbjct: 305 ctccttgcttccgtggttatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 364

                                        
Query: 404 gttgcattgtcagccaagatctatctgtt 432
           | |||||||||||||  ||||| ||||||
Sbjct: 365 gatgcattgtcagccctgatctttctgtt 393



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||||| 
Sbjct: 64  atgaagttcaacattgcgaatcccaccactgggtgccagaaaaagcttgaaatcgatgat 123

                   
Query: 163 gaccagaa 170
           || |||||
Sbjct: 124 gatcagaa 131

---

>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural
           constituent of ribosome AT4G31700 (RPS6) mRNA, complete
           cds
          Length = 993

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 159 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 218

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 219 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 278

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 279 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 338

              
Query: 430 gtt 432
           |||
Sbjct: 339 gtt 341

---

>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative
           ribosomal protein S6 (At4g31700) mRNA, complete cds
          Length = 962

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 161 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 220

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 221 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 280

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 281 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 340

              
Query: 430 gtt 432
           |||
Sbjct: 341 gtt 343

---

>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 784

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 148 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 207

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 208 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 267

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 268 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 327

              
Query: 430 gtt 432
           |||
Sbjct: 328 gtt 330

---

>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 989

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 155 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 214

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 215 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 274

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 275 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 334

              
Query: 430 gtt 432
           |||
Sbjct: 335 gtt 337

---

>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZD05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 938

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 144 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 203

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 204 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 263

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 264 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 323

              
Query: 430 gtt 432
           |||
Sbjct: 324 gtt 326

---

>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds
          Length = 945

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 151 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 210

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| |||||||| | || ||  |||||||  | |||||||| |||
Sbjct: 211 ccaggccgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaagg 270

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   ||||||| |  | || ||||||||||||||||||||||| ||||  ||||| |||
Sbjct: 271 agaactggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctct 330

              
Query: 430 gtt 432
           |||
Sbjct: 331 gtt 333

---

>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 980

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 187/234 (79%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| ||| |||| ||||| ||||| || |||||||||||| | |||||||| || 
Sbjct: 61  atgaagtttaacgtcgcaaacccaaccactggttgccagaagaagctcgagatcgacgat 120

                                                                       
Query: 163 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 222
           |||||||| || ||     ||||||| |||||| |||| || || ||   ||| |||  |
Sbjct: 121 gaccagaaactccgtgcgttttatgataagagactctctcaagaagtcagtggagatgct 180

                                                                       
Query: 223 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 282
            |||| ||||| ||| |||| || || |||||||||||||| || || || ||||| |||
Sbjct: 181 ttgggcgaggagttcaagggatacattttcaagatcatgggagggtgtgacaagcaaggc 240

                                                                 
Query: 283 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           |||||||||||||| |||||  ||||||| || || ||||||||| ||||||||
Sbjct: 241 ttcccaatgaagcagggagttttaactccaggccgtgttcgccttttgcttcac 294



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgtt 432
           ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 349 aagtctgttcgtggttgcattgtcagccaagatctctctgtt 390

---

>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene)
          Length = 959

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 258/329 (78%)
 Strand = Plus / Plus

                                                                       
Query: 103 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgac 162
           |||||||| || ||||| || |||||||| ||||||||||| ||| | ||||| || |||
Sbjct: 26  atgaagttcaatatcgccaatcccaccactgggtgccagaaaaagctcgagattgacgac 85

                                                                       
Query: 163 gaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtgatctt 222
           ||||||||||| ||     ||||||| ||| | || || || || ||   |||||||  |
Sbjct: 86  gaccagaagctccgtgcattttatgataagcgtatttcacaagaagtcagtggtgatgct 145

                                                                       
Query: 223 ctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggc 282
           || || ||||| ||| |||| ||| | ||||| |||||||| || || || |||||||| 
Sbjct: 146 cttggcgaggagttcaagggatatgttttcaaaatcatgggaggttgtgacaagcagggt 205

                                                                       
Query: 283 ttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggc 342
           || || |||||||| |||||||| |||||||| ||||| |||||  |||| ||||| || 
Sbjct: 206 tttcccatgaagcagggagtgctgactcctggtcgcgtccgcctattgctgcacagagga 265

                                                                       
Query: 343 acatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgt 402
           ||| ||||||| |||||  |||| |||||    || |||||  | ||||||||||| |||
Sbjct: 266 acaccttgcttccgtggttatggaaggcgcaacggagagcgaagaaggaagtctgtgcgt 325

                                        
Query: 403 ggttgcattgtcagccaagatctatctgt 431
           || |||||||| ||||  ||||| |||||
Sbjct: 326 gggtgcattgttagccctgatctctctgt 354

---

>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full
           insert sequence
          Length = 1049

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 101 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatg 160
           |||||||| | ||||| ||  |||||||||||||| ||||||||||| | ||||| ||||
Sbjct: 61  ccatgaagctcaacattgcctaccccaccacggggcgccagaagaagctcgagattgatg 120

                           
Query: 161 acgaccagaagctgcg 176
           ||||||||||||||||
Sbjct: 121 acgaccagaagctgcg 136



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 226 ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 285
           ||||| || ||| |||||||  |||||||||||||||| ||    || |||||||| |||
Sbjct: 186 ggtgacgagttcaagggctacgtcttcaagatcatgggaggacaggacaagcagggtttc 245

                               
Query: 286 ccaatgaagcaaggagtgct 305
           || |||||||| || |||||
Sbjct: 246 cccatgaagcagggtgtgct 265

---

>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                          
Query: 250    ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
              |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 113058 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 112999

                                         
Query: 310    cctgggcgcgttcgccttctgcttcac 336
              || || || ||||||||| ||||||||
Sbjct: 112998 ccaggccgtgttcgccttttgcttcac 112972



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                        
Query: 391    aagtctgttcgtggttgcattgtcagccaagatctatctgtt 432
              ||||||||||||||||||||||| ||||  ||||| ||||||
Sbjct: 112808 aagtctgttcgtggttgcattgtgagccctgatctctctgtt 112767

---

>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                         
Query: 250   ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
             |||||||||| |||||| ||||||||||| || |||||||||||||| |||||  | |||
Sbjct: 40213 ttcaagatcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgact 40272

                                        
Query: 310   cctgggcgcgttcgccttctgcttcac 336
             || || || ||||||||| ||||||||
Sbjct: 40273 ccaggccgtgttcgccttttgcttcac 40299



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 391   aagtctgttcgtggttgcattgtcagccaagatctatctgtt 432
             ||||||||||||||||||||||| ||||  ||||| ||||||
Sbjct: 40463 aagtctgttcgtggttgcattgtgagccctgatctctctgtt 40504

---

>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial
          Length = 920

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 174/220 (79%)
 Strand = Plus / Plus

                                                                       
Query: 224 tgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggct 283
           |||| ||||||||  | |||||| | ||||||||||  ||||| || || || || || |
Sbjct: 12  tgggcgaggaatttaaaggctatgttttcaagatcactggtgggtgtgacaaacaaggat 71

                                                                       
Query: 284 tcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacaggggca 343
           ||||||||||||| |||||||| || ||||| || ||||| ||  ||||||| || || |
Sbjct: 72  tcccaatgaagcagggagtgctgacacctggtcgtgttcgactcttgcttcatagaggaa 131

                                                                       
Query: 344 catcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtg 403
           |  |||| || |||||| |||| |||||   ||| |||||  | || |||||||||||||
Sbjct: 132 ctccttgtttccgtggatatggaaggcgcaatggagagcgtagaagaaagtctgttcgtg 191

                                                   
Query: 404 gttgcattgtcagccaagatctatctgttatcaacttggt 443
           | |||||||||||||  || || |||||| | ||||||||
Sbjct: 192 gatgcattgtcagccctgacctctctgttttgaacttggt 231

---

>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114,
             complete sequence
          Length = 94533

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                         
Query: 347   cttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggtt 406
             ||||||| |||||| |||| ||||||  ||| |||||| |||| |||||||| ||||| |
Sbjct: 18675 cttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgtggat 18734

                                                   
Query: 407   gcattgtcagccaagatctatctgttatcaacttggtg 444
             ||||||||||||  || || |||||| | |||||||||
Sbjct: 18735 gcattgtcagccctgacctctctgttctgaacttggtg 18772



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 107   agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
             |||| ||||||||||| || ||||| ||||||||||||||| | || |||||||| ||||
Sbjct: 17770 agttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgatgacc 17829



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Plus

                                                                         
Query: 230   aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
             |||| ||| |||||||| ||||||| ||||  || || ||||| ||||| || || ||||
Sbjct: 18063 aggagttcaagggctatgtcttcaaaatcactggagggtgcgacaagcaaggttttccaa 18122

                                                  
Query: 290   tgaagcaaggagtgctaactcctgggcgcgttcgcct 326
             ||||||| || ||| | || ||||| || ||||||||
Sbjct: 18123 tgaagcagggtgtgttgacccctggccgtgttcgcct 18159

---

>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome
           AT5G10360 (EMB3010) mRNA, complete cds
          Length = 1095

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 426

---

>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence
          Length = 137979

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 388    aggaagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
              ||||||||||||||||| ||||||||||||| ||| || |||||| | ||||||||
Sbjct: 135710 aggaagtctgttcgtgggtgcattgtcagcccagacctctctgttctgaacttggt 135655



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                          
Query: 230    aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
              |||||||  |||| ||| ||||||| ||||  ||||| || || || || ||||| ||||
Sbjct: 136820 aggaatttaagggatatgtcttcaaaatcactggtggatgtgacaaacaaggctttccaa 136761

                                                   
Query: 290    tgaagcaaggagtgctaactcctgggcgcgttcgcct 326
              ||||||| || ||| |||| ||||| || ||||||||
Sbjct: 136760 tgaagcagggtgtgttaacccctggtcgtgttcgcct 136724

---

>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 107   agttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcgatgacgacc 166
             |||| ||| ||||||| || ||||| || |||||||||||| | ||||||||||||||||
Sbjct: 90228 agttcaacgtcgcgaatccgaccactggatgccagaagaagctcgagatcgatgacgacc 90169

                     
Query: 167   agaagctg 174
             | ||||||
Sbjct: 90168 aaaagctg 90161



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 153/194 (78%)
 Strand = Plus / Minus

                                                                         
Query: 250   ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
             |||||||||||||| || ||||| ||||| |||||||| ||||| || ||||| || || 
Sbjct: 89824 ttcaagatcatgggaggatgcgacaagcaaggcttcccgatgaaacagggagttctcacc 89765

                                                                         
Query: 310   cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
             ||||| || || || ||  |||||||| | |||||  |||||||  | ||||| || |||
Sbjct: 89764 cctggtcgtgtccgtctcttgcttcaccgaggcactccttgcttcagaggacacggaagg 89705

                                                                         
Query: 370   cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
              |    || ||| |  |||| |||||||| || |||||||||||||||||||| || |||
Sbjct: 89704 aggaccggagagaggaggagaaagtctgtccgcggttgcattgtcagccaagacctctct 89645

                           
Query: 430   gttatcaacttggt 443
             ||| | ||||||||
Sbjct: 89644 gttcttaacttggt 89631

---

>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 750

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 289 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 341

---

>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 426

---

>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete
             sequence
          Length = 96221

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 388   aggaagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
             ||||||||||||||||| ||||||||||||| ||| || |||||| | ||||||||
Sbjct: 93843 aggaagtctgttcgtgggtgcattgtcagcccagacctctctgttctgaacttggt 93898



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Plus

                                                                         
Query: 230   aggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaa 289
             |||||||  |||| ||| ||||||| ||||  ||||| || || || || ||||| ||||
Sbjct: 92733 aggaatttaagggatatgtcttcaaaatcactggtggatgtgacaaacaaggctttccaa 92792

                                                  
Query: 290   tgaagcaaggagtgctaactcctgggcgcgttcgcct 326
             ||||||| || ||| |||| ||||| || ||||||||
Sbjct: 92793 tgaagcagggtgtgttaacccctggtcgtgttcgcct 92829

---

>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 374 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 426

---

>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 969

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 195 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 254

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 255 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 302



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 357 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 409

---

>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 947

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 252

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 355 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 407

---

>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6
          Length = 957

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || || || ||||| || ||||||
Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 289 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 341

---

>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                          
Query: 250    ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
              |||||||||||||| || || || ||||| || ||||||||||| |||||||| || |||
Sbjct: 105341 ttcaagatcatgggaggatgtgacaagcaaggtttcccaatgaaacaaggagttctcact 105400

                                         
Query: 310    cctgggcgcgttcgccttctgcttcac 336
              || ||||| || || ||| ||||||||
Sbjct: 105401 ccagggcgtgtccgtcttttgcttcac 105427



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 391    aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
              |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 105579 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 105631

---

>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6
          Length = 804

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 145/183 (79%)
 Strand = Plus / Minus

                                                                       
Query: 250 ttcaagatcatgggtggctgcgataagcagggcttcccaatgaagcaaggagtgctaact 309
           |||||||| ||||| || || || |||||||| || ||||||||||| |||||  |||||
Sbjct: 790 ttcaagattatgggaggatgtgacaagcaggggtttccaatgaagcagggagttttaact 731

                                                                       
Query: 310 cctgggcgcgttcgccttctgcttcacaggggcacatcttgctttcgtggacatggcagg 369
           || || || ||||||||| ||||  || | |||||  |||| || || ||  |||| |||
Sbjct: 730 ccaggccgtgttcgccttttgctgtaccgcggcactccttgtttccgggggtatggtagg 671

                                                                       
Query: 370 cgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagatctatct 429
            |   |||||||||| | || |||||||| ||||| |||||||||||||  ||||| |||
Sbjct: 670 agaaatggtgagcgcagaagaaagtctgtccgtggatgcattgtcagccctgatctttct 611

              
Query: 430 gtt 432
           |||
Sbjct: 610 gtt 608

---

>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 981

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                       
Query: 229 gaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttccca 288
           ||||||||| |||| ||  | |||||||||||||| || ||  | ||||| || ||||||
Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgttacaagcaaggtttccca 252

                                                           
Query: 289 atgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcac 336
           ||||| |||||||| || ||||| ||||| || || ||| ||||||||
Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 355 aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 407

---

>gb|BC061628.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA (cDNA clone
           MGC:76307 IMAGE:5379757), complete cds
          Length = 846

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 271 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 330
           |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| ||||||
Sbjct: 199 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 258

---

>gb|BC082345.1| Xenopus tropicalis 40S ribosomal protein S6, mRNA (cDNA clone
           MGC:79740 IMAGE:6983051), complete cds
          Length = 835

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 271 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 330
           |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| ||||||
Sbjct: 192 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 251

---

>ref|NM_203821.1| Xenopus tropicalis 40S ribosomal protein S6 (MGC76307), mRNA
          Length = 846

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 271 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 330
           |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| ||||||
Sbjct: 199 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 258

---

>emb|CR760876.2| Xenopus tropicalis finished cDNA, clone TTpA006h06
          Length = 824

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 271 gataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 330
           |||||||| ||||| || ||||| || ||||||||||||| ||| || ||||| ||||||
Sbjct: 186 gataagcaaggctttcccatgaaacagggagtgctaactcatggccgtgttcgtcttctg 245

---

>gb|AY521658.1| Pseudopleuronectes americanus 40S ribosomal protein S6 (RPS6) mRNA,
           partial cds
          Length = 550

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 274 aagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgct 332
           |||||||||||||| |||||||| || ||||| || | ||| ||||| ||||| |||||
Sbjct: 97  aagcagggcttccccatgaagcagggtgtgctgacccatggtcgcgtgcgcctgctgct 155

---

>ref|NM_061034.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family
           member (rps-6) (rps-6) mRNA, complete cds
          Length = 806

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 274 aagcagggcttcccaatgaagcaagga 300
           |||||||| ||||||||||||||||||
Sbjct: 191 aagcagggattcccaatgaagcaagga 217

---

>gb|AF429980.1| Spodoptera frugiperda ribosomal protein S6 mRNA, complete cds
          Length = 842

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 391 aagtctgttcgtggttgcattgt 413
           |||||||||||||||||||||||
Sbjct: 301 aagtctgttcgtggttgcattgt 323



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 274 aagcagggcttcccaatgaagcaaggagt 302
           |||||||||||||| |||||||| |||||
Sbjct: 190 aagcagggcttccccatgaagcagggagt 218

---

>emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, complete sequence
          Length = 137184

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 274   aagcagggcttcccaatgaagcaagga 300
             |||||||| ||||||||||||||||||
Sbjct: 83964 aagcagggattcccaatgaagcaagga 83990

---

>ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA
          Length = 711

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 226 ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 285
           ||||| |||||| |||| || | |||||||||||  |||||   ||| ||||| || |||
Sbjct: 124 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 183

                         
Query: 286 ccaatgaagcaagg 299
           ||||||||||||||
Sbjct: 184 ccaatgaagcaagg 197

---

>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                          
Query: 226    ggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagcagggcttc 285
              ||||| |||||| |||| || | |||||||||||  |||||   ||| ||||| || |||
Sbjct: 560268 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 560327

                            
Query: 286    ccaatgaagcaagg 299
              ||||||||||||||
Sbjct: 560328 ccaatgaagcaagg 560341

---

>gb|AF402814.1| Ictalurus punctatus 40S ribosomal protein S6 mRNA, complete cds
          Length = 819

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 271 gataagcagggcttcccaatgaagca 296
           ||||||||||||||||| ||||||||
Sbjct: 193 gataagcagggcttccccatgaagca 218

---

>dbj|AK108193.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C04, full
           insert sequence
          Length = 993

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 239 agggctatatcttcaagatcatgggtggctgcgataagcagggcttcccaatgaagca 296
           |||||||  ||||||||||||  || |||  ||| |||||||||||||| ||||||||
Sbjct: 187 agggctacgtcttcaagatcaccggcggcaacgacaagcagggcttccccatgaagca 244

---

>gb|BC041281.1| Xenopus laevis ribosomal protein S6, mRNA (cDNA clone MGC:53553
           IMAGE:4681484), complete cds
          Length = 840

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 274 aagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctg 330
           ||||| ||||| || ||||| || ||||||||||||| ||| || ||||| ||||||
Sbjct: 202 aagcaaggctttcccatgaaacagggagtgctaactcatggtcgtgttcgtcttctg 258

---

>emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chromosome 6, complete
             sequence
          Length = 60742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   aggaggtagttggtgatcttc 223
             |||||||||||||||||||||
Sbjct: 14137 aggaggtagttggtgatcttc 14157

---

>emb|AL353193.7| Human DNA sequence from clone RP11-137F15 on chromosome 20 Contains a
             pseudogene similar to a TCEAL1 (transcription elongation
             factor A (SII)-like 1, the 5' part of the ATRN gene for
             attractin with dipeptidylpeptidase IV activity and a CpG
             island, complete sequence
          Length = 51371

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   aagcagggcttcccaatgaag 294
             |||||||||||||||||||||
Sbjct: 27357 aagcagggcttcccaatgaag 27377

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        ctcgccccaaaccctagcgct 21
                |||||||||||||||||||||
Sbjct: 41486372 ctcgccccaaaccctagcgct 41486352

---

>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 391 aagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggt 443
           |||||||| |||||||||||||| ||||  || || |||||| | ||||||||
Sbjct: 35  aagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggt 87

---

>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete
             sequence
          Length = 119696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    caacttcaccatgaagttgaa 113
             |||||||||||||||||||||
Sbjct: 77325 caacttcaccatgaagttgaa 77305

---

>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0614D08
          Length = 147548

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ctcgccccaaaccctagcgct 21
             |||||||||||||||||||||
Sbjct: 42665 ctcgccccaaaccctagcgct 42645

---

>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0660F12
          Length = 147203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ctcgccccaaaccctagcgct 21
             |||||||||||||||||||||
Sbjct: 54571 ctcgccccaaaccctagcgct 54551

---

>dbj|AK120633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I18, full
           insert sequence
          Length = 5246

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   ctcgccccaaaccctagcgct 21
           |||||||||||||||||||||
Sbjct: 433 ctcgccccaaaccctagcgct 453

---

>dbj|AK105567.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-C09, full
           insert sequence
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   ctcgccccaaaccctagcgct 21
           |||||||||||||||||||||
Sbjct: 438 ctcgccccaaaccctagcgct 458

---

>gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG1) gene, partial cds
          Length = 1455

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1315 ggaggtagttggtgatcttc 1296

---

>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 141     gaagaaggtggagatcgatg 160
               ||||||||||||||||||||
Sbjct: 1201647 gaagaaggtggagatcgatg 1201628

---

>gb|AC009259.8| Trypanosoma brucei chromosome 6 clone RPCI93-4F7, complete sequence
          Length = 153262

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   gaagaaggtggagatcgatg 160
             ||||||||||||||||||||
Sbjct: 11907 gaagaaggtggagatcgatg 11926

---

>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence
          Length = 140056

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    gaagaaggtggagatcgatg 160
              ||||||||||||||||||||
Sbjct: 139271 gaagaaggtggagatcgatg 139290

---

>gb|AY190727.1| Pagrus major S6 ribosomal protein mRNA, partial cds
          Length = 564

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 274 aagcagggcttcccaatgaagcaaggagtgct 305
           |||||||||||||| |||||||| || |||||
Sbjct: 146 aagcagggcttccccatgaagcagggtgtgct 177

---

>gb|AY430215.1| Spirinchus thaleichthys recombination activating protein 1 (RAG1)
            gene, partial cds
          Length = 1472

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1335 ggaggtagttggtgatcttc 1316

---

>gb|AY380539.1| Salangichthys microdon recombination-activating protein 1 (RAG1)
            gene, partial cds
          Length = 1506

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1342 ggaggtagttggtgatcttc 1323

---

>gb|AY380538.1| Hypomesus olidus recombination-activating protein 1 (RAG1) gene,
            partial cds
          Length = 1555

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1364 ggaggtagttggtgatcttc 1345

---

>gb|AY380537.1| Thaleichthys pacificus recombination-activating protein 1 (RAG1)
            gene, partial cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1365 ggaggtagttggtgatcttc 1346

---

>gb|AY380536.1| Plecoglossus altivelis recombination-activating protein 1 (RAG1)
            gene, partial cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ggaggtagttggtgatcttc 223
            ||||||||||||||||||||
Sbjct: 1365 ggaggtagttggtgatcttc 1346

---

>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
             complete sequence
          Length = 151399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ctcgccccaaaccctagcgc 20
             ||||||||||||||||||||
Sbjct: 34784 ctcgccccaaaccctagcgc 34803

---

>ref|NM_012652.1| Rattus norvegicus solute carrier family 9, member 1 (Slc9a1), mRNA
          Length = 4581

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2824 aggtagttggtgatcttctg 2805

---

>ref|XM_821548.1| Trypanosoma brucei TREU927 clone RPCI93-4F7 hypothetical protein
           (Tb927.6.4180) partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 gaagaaggtggagatcgatg 160
           ||||||||||||||||||||
Sbjct: 276 gaagaaggtggagatcgatg 295

---

>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tcctgggcgcgttcgccttc 328
              ||||||||||||||||||||
Sbjct: 136286 tcctgggcgcgttcgccttc 136267

---

>ref|NM_016981.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            member 1 (Slc9a1), mRNA
          Length = 4126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2378 aggtagttggtgatcttctg 2359

---

>gb|BC052708.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            member 1, mRNA (cDNA clone MGC:64648 IMAGE:5702902),
            complete cds
          Length = 3907

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2717 aggtagttggtgatcttctg 2698

---

>gb|BC051431.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            member 1, mRNA (cDNA clone MGC:58902 IMAGE:6529306),
            complete cds
          Length = 3989

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2182 aggtagttggtgatcttctg 2163

---

>gb|AF472590.1| Sinorhizobium meliloti JJ1c10 hypothetical transmembrane protein,
            hypothetical protein, hypothetical transmembrane protein,
            hypothetical protein, aspartate aminotransferase A
            (aatA), hypothetical protein, putative oxidoreductase
            protein, and putative oxidoreductase protein genes,
            complete cds; and putative transcription regulator
            protein gene, partial cds
          Length = 7402

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  tcctgggcgcgttcgccttc 328
            ||||||||||||||||||||
Sbjct: 1998 tcctgggcgcgttcgccttc 2017

---

>dbj|AK154857.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630109M11
            product:solute carrier family 9 (sodium/hydrogen
            exchanger), member 1, full insert sequence
          Length = 4191

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2872 aggtagttggtgatcttctg 2853

---

>dbj|AK150135.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530135M05 product:solute carrier family 9
            (sodium/hydrogen exchanger), member 1, full insert
            sequence
          Length = 4609

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2838 aggtagttggtgatcttctg 2819

---

>dbj|AK162209.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420457F09 product:solute
           carrier family 9 (sodium/hydrogen exchanger), member 1,
           full insert sequence
          Length = 1624

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 aggtagttggtgatcttctg 225
           ||||||||||||||||||||
Sbjct: 166 aggtagttggtgatcttctg 147

---

>gb|BC004687.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
           member 1, mRNA (cDNA clone IMAGE:3500839), partial cds
          Length = 1833

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 aggtagttggtgatcttctg 225
           ||||||||||||||||||||
Sbjct: 42  aggtagttggtgatcttctg 23

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       ctcgccccaaaccctagcgc 20
               ||||||||||||||||||||
Sbjct: 1941907 ctcgccccaaaccctagcgc 1941926

---

>gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, complete sequence
          Length = 174225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 241   ggctatatcttcaagatcatgggt 264
             |||||||||||||||| |||||||
Sbjct: 10801 ggctatatcttcaagagcatgggt 10778

---

>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete
             sequence
          Length = 194306

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   gaatctcccaggaggtagtt 213
             ||||||||||||||||||||
Sbjct: 94900 gaatctcccaggaggtagtt 94881

---

>gb|AY130373.1| Petromyzon marinus ribosomal protein S6-like mRNA, partial sequence
          Length = 691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 274 aagcagggcttcccaatgaagcaaggagtgct 305
           |||||||||||||| |||||||| || |||||
Sbjct: 146 aagcagggcttccccatgaagcagggcgtgct 177

---

>gb|AY130372.1| Myxine glutinosa ribosomal protein S6-like mRNA, partial sequence
          Length = 691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 391 aagtctgttcgtggttgcattgtc 414
           |||||||||||||| |||||||||
Sbjct: 257 aagtctgttcgtgggtgcattgtc 280

---

>gb|AF009665.1|AF009665 Oncorhynchus mykiss S6 ribosomal protein mRNA, complete cds
          Length = 805

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 274 aagcagggcttcccaatgaagcaaggagtgct 305
           |||||||||||||| |||||||| || |||||
Sbjct: 175 aagcagggcttccccatgaagcagggtgtgct 206

---

>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete
              sequence
          Length = 163961

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    tgggtggctgcgataagcagggct 283
              |||||||||| |||||||||||||
Sbjct: 150128 tgggtggctgtgataagcagggct 150151

---

>gb|M85299.1|RATNHEXI Rat sodium/hydrogen exchange protein-isoform 1 (NHE-1) mRNA, complete
            cds
          Length = 4581

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2824 aggtagttggtgatcttctg 2805

---

>gb|U51112.1|MMU51112 Mus musculus Na+/H+ exchanger (NHE-1) mRNA, complete cds
          Length = 4126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  aggtagttggtgatcttctg 225
            ||||||||||||||||||||
Sbjct: 2378 aggtagttggtgatcttctg 2359


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,995,000
Number of Sequences: 3902068
Number of extensions: 2995000
Number of successful extensions: 57437
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57117
Number of HSP's gapped (non-prelim): 313
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---