ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast60e09 |
|---|---|
| Clone Library Name | barley_pub |
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 107 bits (267), Expect = 1e-23 Identities = 55/112 (49%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Frame = +1 Query: 100 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDG--SVLVKNLYLSCDPYMRPKMSRP--- 264 +++V+LKDYV G+PTE+ + +G SVLVKNLYLSCDPYMR +M +P Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64 Query: 265 ---LHQSYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVI 411 L Q+YT PG PI GYGVS ++ S P GDL+WG+ WE+YSVI Sbjct: 65 TAALAQAYT----PGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVI 112
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 106 bits (264), Expect = 3e-23 Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 3/107 (2%) Frame = +1 Query: 100 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGS--VLVKNLYLSCDPYMRPKMSRPLHQ 273 +++V+ KD+V G+P E+ +GS VLVKNLYLSCDPYMR +M +P Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPS 63 Query: 274 SYTA-AFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVI 411 S A A+ PG PI GYGVS V+ S P GDL+WG+ GWE+YSVI Sbjct: 64 SALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVI 110
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 62.8 bits (151), Expect = 3e-10 Identities = 39/104 (37%), Positives = 54/104 (51%) Frame = +1 Query: 97 KSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 ++RR VL G P + L V +G VL++ +YLS DPYMR +MS S Sbjct: 15 RNRRWVLASRPHGAPVPENFRL-EEDDVATPGEGQVLLRTVYLSLDPYMRGRMSD--EPS 71 Query: 277 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 Y+ G + G VS VV S+ P +GD V G +GW+DY + Sbjct: 72 YSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDI 115
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 52.0 bits (123), Expect = 6e-07 Identities = 32/105 (30%), Positives = 50/105 (47%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 ++++ LK + G+PT++ EL + +G VL++ L+LS DPYMR R Sbjct: 2 VRAKNWTLKKHFHGHPTDSDFEL-KTVELPPLNNGEVLLEALFLSVDPYMRLGSKR---- 56 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 G + G V+ VV S P G LV +GW +S+ Sbjct: 57 -----LKEGDTMMGQQVARVVESKNPAWPVGTLVLAHSGWASHSI 96
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 51.6 bits (122), Expect = 8e-07 Identities = 32/105 (30%), Positives = 51/105 (48%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 +K++ LK + +G PT++ EL + ++G VL++ L+LS DPYMR R Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFEL-KTVELPPLKNGEVLLEALFLSVDPYMRIASKR---- 56 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 GA + G V+ VV S AG +V +GW + + Sbjct: 57 -----LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFI 96
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 50.4 bits (119), Expect = 2e-06 Identities = 30/105 (28%), Positives = 51/105 (48%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 ++++ LK + EG+PT+++ EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELR-TTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 G + G V+ VV S G +V + GW +S+ Sbjct: 57 -----LKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSI 96
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 50.1 bits (118), Expect = 2e-06 Identities = 31/105 (29%), Positives = 51/105 (48%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 ++++ LK + GYPT + EL A + ++G VL++ L+L+ DPYMR R Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFEL-KTAELPPLKNGEVLLEALFLTVDPYMRVAAKR---- 56 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 G + G V++VV S + G +V GW +S+ Sbjct: 57 -----LKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI 96
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 49.7 bits (117), Expect = 3e-06 Identities = 30/105 (28%), Positives = 50/105 (47%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 ++++ LK + EG+PT+ + EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKSWTLKKHFEGFPTDGNFEL-KTTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 G + G V+ VV S G +V + GW +S+ Sbjct: 57 -----LKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHSI 96
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 47.0 bits (110), Expect = 2e-05 Identities = 30/105 (28%), Positives = 53/105 (50%) Frame = +1 Query: 94 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 273 ++++ LK + GYPT ++ EL + ++G VL++ L+L+ DPYMR +R L + Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFEL-KTVELPPLKNGEVLLEALFLTVDPYMR-IAARKLKE 59 Query: 274 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 408 G + G V+ V+ S G +V + GW +S+ Sbjct: 60 --------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSI 96
>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic| region Length = 365 Score = 45.4 bits (106), Expect = 5e-05 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = +1 Query: 181 DEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSSTPGVA 360 ++ +DG +L++ YLS DP + +S + ++Y PG I G+ +V+ S + Sbjct: 40 EQLKDGELLLETTYLSNDPAQKFWISS-MDKNYAKGVQPGEIIPARGIGKVLASRNKAFS 98 Query: 361 AGDLVWGMTGWEDYSVI 411 GD V +TGW +++I Sbjct: 99 PGDYVSAVTGWTTHAII 115
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 45.4 bits (106), Expect = 5e-05 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 2/93 (2%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + + +D +G V V+ LYLS DPYMR KM+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 63 Query: 277 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLV 375 Y A + G G+ V S +A GD V Sbjct: 64 YLAPWQLAQVADGGGIGIVEESKHQKLAKGDFV 96
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 42.4 bits (98), Expect = 5e-04 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 277 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLV 375 Y + + G G+ + S + GD V Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 96
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 42.4 bits (98), Expect = 5e-04 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Frame = +1 Query: 103 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 276 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 277 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLV 375 Y + + G G+ + S + GD V Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 96
>SYE_TOBAC (Q43794) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 569 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Frame = +1 Query: 190 EDGSVLVKN---LYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRS----ST 348 +D +L+K+ L + + +S PL++ T A G PI GVSEV +S Sbjct: 409 QDAVLLLKDGIDLITDSEKALSSLLSYPLYE--TLASAEGKPILEDGVSEVAKSLLAAYD 466 Query: 349 PGVAAGDLVWGMTGWEDYS 405 G +G L G GW+ ++ Sbjct: 467 SGELSGALAEGQPGWQKWA 485
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Frame = +1 Query: 160 LLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSR----------PLHQSYTAAFVPGAPI 309 L+PA P ++ V K ++ P RPK +R P H S VP + Sbjct: 216 LVPAPPDRSSQAPHVQAKAEDVAASPVPRPKPARAKKQATHRLVPCHTSIPGMVVPPPEM 275 Query: 310 TGYGVSEVVRSSTP-------GVAAGDLVWGMTGWEDY 402 + + V++++ TP ++ W ++ W +Y Sbjct: 276 SIFDVADIIGHDTPVEVIDVASQSSSKASWTISEWAEY 313
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/85 (22%), Positives = 37/85 (43%) Frame = +1 Query: 67 PRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 P ++ L+ + +D E T A ++ L ++ ++ ++LYL DP +R Sbjct: 509 PTHQQGQPALELKEESFRDPAEVLGTGAEVDYLEQFGTSSFKESALRKQSLYLKFDPLLR 568 Query: 247 PKMSRPLHQSYTAAFVPGAPITGYG 321 RP+ + + + GA T G Sbjct: 569 DSPGRPVPVATETSSMHGANETPSG 593
>MYO1A_MOUSE (O88329) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Fragment) Length = 909 Score = 29.6 bits (65), Expect = 3.1 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 73 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 R S K++ +LK + EG P EA ++ P A +VL+KNLY Y+R Sbjct: 529 RDLSQTMWKAQHPLLKSLFPEGNPKEASLKRPPTAGTQFKNSVAVLMKNLYSKNPNYIR 587
>MOLR_ECOLI (P33345) Molybdate metabolism regulator| Length = 1264 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 49 ARSPVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAP--VDEAEDGS 201 A S + P R+ +LK+ R + ++ YP A LLPAAP EA+D + Sbjct: 678 AASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAPGKAGEAQDNA 730
>ASK1_ASHGO (Q75DE8) DASH complex subunit ASK1 (Outer kinetochore protein ASK1)| (Associated with spindles and kinetochores protein 1) Length = 181 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Frame = +1 Query: 142 TEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSY----TAAFVPGAP 306 TE H+ +P + DE +DGS L + + R K+S L Q Y +++FV +P Sbjct: 102 TEGHVLAVPVSSDDEPDDGSTLQRQ-------HKRRKLSLQLQQRYGSSSSSSFVSRSP 153
>SPD3_MOUSE (Q6P6N5) Sprouty-related, EVH1 domain-containing protein 3| (Spred-3) Length = 408 Score = 28.9 bits (63), Expect = 5.3 Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 6/134 (4%) Frame = +1 Query: 19 RSRSVALHRLARSPVHPRRRRSMA----ELKSRRVVLKDYVEGYPTEAH--MELLPAAPV 180 +S AL L+R + P S + + L +V+ + +H E P AP+ Sbjct: 104 KSLLAALAALSRGSLTPSSSSSSSSPSQDTAETPCPLTSHVDSDSSSSHSRQETPPTAPI 163 Query: 181 DEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSSTPGVA 360 E + RP+ R QSY P P TG + S Sbjct: 164 ATVESAAAFPLAT--------RPQRRRSSAQSYP----PLLPFTG-----IPEPSESLAG 206 Query: 361 AGDLVWGMTGWEDY 402 AG WG G+EDY Sbjct: 207 AGSQGWGSRGYEDY 220
>P60_LISGR (Q01835) Protein p60 precursor (Invasion-associated protein)| Length = 511 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T G +T + VV ++T VA+GD +WG+ Sbjct: 7 TIVSAAGIAVTAFAAPSVVSANTVVVASGDTLWGI 41
>IYD1_RAT (Q5BK17) Iodotyrosine dehalogenase 1 precursor (EC 1.-.-.-) (IYD-1)| Length = 285 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = +1 Query: 196 GSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSS 345 G V V L+C P +R + RP H+ G P G V ++ R + Sbjct: 228 GLVTVTTTPLNCGPRLRVLLGRPSHEKLLVLLPVGYPSRGATVPDLKRKT 277
>P60_LISMO (P21171) Protein p60 precursor (Invasion-associated protein)| Length = 484 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T A G +T + + +ST V AGD +WG+ Sbjct: 7 TIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGI 41
>P60_LISIN (Q01836) Protein p60 precursor (Invasion-associated protein)| Length = 467 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T A G +T + + +ST V AGD +WG+ Sbjct: 7 TIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGI 41
>MYO1A_BOVIN (P10568) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Brush border 110-kDa protein) Length = 1043 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 73 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 246 R S A K+R +L+ + EG P +A ++ P A + L+KNLY Y+R Sbjct: 529 RDLSQAMWKARHPLLRSLFPEGDPKQASLKRPPTAGAQFKSSVTTLMKNLYSKNPNYIR 587
>VE1_HPV12 (Q05134) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 604 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = +1 Query: 28 SVALHRLARSPVHPRRRRSMAELKSR-RVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSV 204 S L ++ SP +RR AE S + L + E E + + + PVDE G++ Sbjct: 89 SPRLESISLSPQQKSKRRLFAEQDSGLELSLNNEAEDVSPEVEVPAIDSRPVDEGGSGAI 148 Query: 205 LVKNLYLSCDPYMRPKMSRPLHQSYTAAF 291 + L L ++ + +S+ F Sbjct: 149 DIDYLSLLRSSNIKATLMAKFKESFGVGF 177
>P60_LISSE (Q01838) Protein p60 precursor (Invasion-associated protein)| Length = 523 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T A G +T + + +ST V AGD +WG+ Sbjct: 7 TIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGI 41
>P60_LISWE (Q01839) Protein p60 precursor (Invasion-associated protein)| Length = 524 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T A G +T + + +ST V AGD +WG+ Sbjct: 7 TIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGI 41
>P60_LISIV (Q01837) Protein p60 precursor (Invasion-associated protein)| Length = 524 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 280 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM 384 T A G +T + + +ST V AGD +WG+ Sbjct: 7 TIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGI 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,571,198 Number of Sequences: 219361 Number of extensions: 680145 Number of successful extensions: 3065 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3056 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
